RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 CAMK2N1Q7Z7J9 78 aa1.52□□□□□ -2.17
PPP4R1-209ENST00000578329 C10orf95Q9H7T3 257 aa1.52□□□□□ -2.17
PPP4R1-209ENST00000578329 SPANXA2-OT1Q8N9U9 137 aa1.51□□□□□ -2.17
PPP4R1-209ENST00000578329 KRTAP20-2Q3LI61 65 aa1.5□□□□□ -2.17
PPP4R1-209ENST00000578329 SPTSSBQ8NFR3 76 aa1.5□□□□□ -2.17
PPP4R1-209ENST00000578329 CHKB-CPT1BH3BT56 60 aa1.49□□□□□ -2.17
PPP4R1-209ENST00000578329 PP632Q6XCG6 107 aa1.49□□□□□ -2.17
PPP4R1-209ENST00000578329 COA5Q86WW8 74 aa1.49□□□□□ -2.17
PPP4R1-209ENST00000578329 A8MU10 97 aa1.48□□□□□ -2.17
PPP4R1-209ENST00000578329 SPINT4Q6UDR6 99 aa1.47□□□□□ -2.17
PPP4R1-209ENST00000578329 SMIM20Q8N5G0 67 aa1.47□□□□□ -2.17
PPP4R1-209ENST00000578329 A0A1B0GU33 70 aa1.46□□□□□ -2.18
PPP4R1-209ENST00000578329 J3QR89 54 aa1.46□□□□□ -2.18
PPP4R1-209ENST00000578329 SERP2Q8N6R1 65 aa1.46□□□□□ -2.18
PPP4R1-209ENST00000578329 SYNE1Q8NF91 8797 aaKnown RBP1.45□□□□□ -2.18
PPP4R1-209ENST00000578329 SPRR5A0A1B0GTR4 108 aa1.45□□□□□ -2.18
PPP4R1-209ENST00000578329 H7BZZ5 65 aa1.44□□□□□ -2.18
PPP4R1-209ENST00000578329 LCE1EQ5T753 118 aa1.44□□□□□ -2.18
PPP4R1-209ENST00000578329 KRTAP12-3P60328 96 aa1.43□□□□□ -2.18
PPP4R1-209ENST00000578329 K7ERU9 68 aa1.41□□□□□ -2.18
PPP4R1-209ENST00000578329 TNP1P09430 55 aa1.39□□□□□ -2.19
PPP4R1-209ENST00000578329 COX7CP15954 63 aa1.39□□□□□ -2.19
PPP4R1-209ENST00000578329 SERP1Q9Y6X1 66 aa1.38□□□□□ -2.19
PPP4R1-209ENST00000578329 KRTAP9-6A8MVA2 160 aa1.37□□□□□ -2.19
PPP4R1-209ENST00000578329 KRTAP6-1Q3LI64 71 aa1.37□□□□□ -2.19
PPP4R1-209ENST00000578329 SMIM26A0A096LP01 95 aa1.36□□□□□ -2.19
PPP4R1-209ENST00000578329 SEC61GP60059 68 aa1.36□□□□□ -2.19
PPP4R1-209ENST00000578329 KRTAP12-4P60329 112 aa1.36□□□□□ -2.19
PPP4R1-209ENST00000578329 A0A1B0GU69 56 aa1.35□□□□□ -2.19
PPP4R1-209ENST00000578329 AHNAKQ09666 5890 aaKnown RBP1.35□□□□□ -2.19
PPP4R1-209ENST00000578329 MUC5BQ9HC84 5762 aaPredicted RBP1.34□□□□□ -2.19
PPP4R1-209ENST00000578329 MUC5ACP98088 5654 aa1.34□□□□□ -2.19
PPP4R1-209ENST00000578329 MT1AP04731 61 aa1.34□□□□□ -2.19
PPP4R1-209ENST00000578329 CCDC179H3BU77 68 aa1.32□□□□□ -2.2
PPP4R1-209ENST00000578329 LCE3CQ5T5A8 94 aa1.32□□□□□ -2.2
PPP4R1-209ENST00000578329 LINC01558Q9Y6Z2 57 aa1.32□□□□□ -2.2
PPP4R1-209ENST00000578329 KRTAP6-2Q3LI66 62 aa1.3□□□□□ -2.2
PPP4R1-209ENST00000578329 KRTAP15-1Q3LI76 137 aa1.3□□□□□ -2.2
PPP4R1-209ENST00000578329 KRTAP25-1Q3LHN0 102 aa1.29□□□□□ -2.2
PPP4R1-209ENST00000578329 KRTAP23-1A1A580 65 aa1.25□□□□□ -2.21
PPP4R1-209ENST00000578329 ANAPC13Q9BS18 74 aa1.24□□□□□ -2.21
PPP4R1-209ENST00000578329 UQCR11O14957 56 aa1.23□□□□□ -2.21
PPP4R1-209ENST00000578329 MIR22HGQ0VDD5 57 aa1.21□□□□□ -2.22
PPP4R1-209ENST00000578329 PRR15LQ9BU68 103 aa1.21□□□□□ -2.22
PPP4R1-209ENST00000578329 ATP5EP56381 51 aaPredicted RBP1.2□□□□□ -2.22
PPP4R1-209ENST00000578329 MT3P25713 68 aa1.18□□□□□ -2.22
PPP4R1-209ENST00000578329 PSPHP1O15172 72 aa1.17□□□□□ -2.22
PPP4R1-209ENST00000578329 TMEM258P61165 79 aa1.17□□□□□ -2.22
PPP4R1-209ENST00000578329 Q1T7F1 81 aa1.16□□□□□ -2.22
PPP4R1-209ENST00000578329 ROMO1P60602 79 aa1.11□□□□□ -2.23
PPP4R1-209ENST00000578329 K7ERS5 55 aa1.09□□□□□ -2.23
PPP4R1-209ENST00000578329 CDC42SE1Q9NRR8 79 aa1.09□□□□□ -2.23
PPP4R1-209ENST00000578329 A6NED7 52 aa1.07□□□□□ -2.24
PPP4R1-209ENST00000578329 RPS28P62857 69 aaKnown RBP1.06□□□□□ -2.24
PPP4R1-209ENST00000578329 LCE1CQ5T751 118 aa1.06□□□□□ -2.24
PPP4R1-209ENST00000578329 LCE1BQ5T7P3 118 aa1.06□□□□□ -2.24
PPP4R1-209ENST00000578329 V9GYY9 64 aa1.06□□□□□ -2.24
PPP4R1-209ENST00000578329 H3BS24 57 aa0.96□□□□□ -2.26
PPP4R1-209ENST00000578329 KRTAP21-2Q3LI59 83 aa0.93□□□□□ -2.26
PPP4R1-209ENST00000578329 LCE1FQ5T754 118 aa0.93□□□□□ -2.26
PPP4R1-209ENST00000578329 LCE3DQ9BYE3 92 aa0.9□□□□□ -2.27
PPP4R1-209ENST00000578329 PHGR1C9JFL3 82 aa0.88□□□□□ -2.27
PPP4R1-209ENST00000578329 PCP4P48539 62 aa0.87□□□□□ -2.27
PPP4R1-209ENST00000578329 LCE3EQ5T5B0 92 aa0.83□□□□□ -2.28
PPP4R1-209ENST00000578329 PRAC1Q96KF2 57 aa0.83□□□□□ -2.28
PPP4R1-209ENST00000578329 MUC19Q7Z5P9 8384 aa0.81□□□□□ -2.28
PPP4R1-209ENST00000578329 BRK1Q8WUW1 75 aa0.79□□□□□ -2.28
PPP4R1-209ENST00000578329 PMAIP1Q13794 54 aa0.73□□□□□ -2.29
PPP4R1-209ENST00000578329 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
PPP4R1-209ENST00000578329 SVIPQ8NHG7 77 aa0.6□□□□□ -2.31
PPP4R1-209ENST00000578329 PRO0628Q9UI54 55 aa0.6□□□□□ -2.31
PPP4R1-209ENST00000578329 PRM1P04553 51 aa0.59□□□□□ -2.31
PPP4R1-209ENST00000578329 KTN1-AS1Q86SY8 53 aa0.59□□□□□ -2.31
PPP4R1-209ENST00000578329 MUC16Q8WXI7 14507 aa0.57□□□□□ -2.32
PPP4R1-209ENST00000578329 LUZP6Q538Z0 58 aa0.53□□□□□ -2.32
PPP4R1-209ENST00000578329 NDUFAF8A1L188 74 aa0.47□□□□□ -2.33
PPP4R1-209ENST00000578329 A0A0A0MQY5 61 aa0.34□□□□□ -2.36
PPP4R1-209ENST00000578329 INE1O15225 51 aa0.31□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms