RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 PSPHP1O15172 72 aa9.36□□□□□ -0.91
PPP4R1-204ENST00000577393 Q1T7F1 81 aa9.34□□□□□ -0.91
PPP4R1-204ENST00000577393 MT1MQ8N339 61 aa9.34□□□□□ -0.91
PPP4R1-204ENST00000577393 GPR98Q8WXG9 6306 aa9.24□□□□□ -0.93
PPP4R1-204ENST00000577393 K7ERS5 55 aa9.23□□□□□ -0.93
PPP4R1-204ENST00000577393 KRTAP12-3P60328 96 aa9.19□□□□□ -0.94
PPP4R1-204ENST00000577393 KRTAP25-1Q3LHN0 102 aa9.16□□□□□ -0.94
PPP4R1-204ENST00000577393 KRTAP4-3Q9BYR4 195 aa9.13□□□□□ -0.95
PPP4R1-204ENST00000577393 KRTAP4-9Q9BYQ8 210 aa9.11□□□□□ -0.95
PPP4R1-204ENST00000577393 A6NED7 52 aa9.04□□□□□ -0.96
PPP4R1-204ENST00000577393 KRTAP4-7Q9BYR0 210 aa8.98□□□□□ -0.97
PPP4R1-204ENST00000577393 PCP4P48539 62 aa8.96□□□□□ -0.98
PPP4R1-204ENST00000577393 RPS28P62857 69 aaKnown RBP8.95□□□□□ -0.98
PPP4R1-204ENST00000577393 LCE4AQ5TA78 99 aa8.94□□□□□ -0.98
PPP4R1-204ENST00000577393 LCE1DQ5T752 114 aa8.92□□□□□ -0.98
PPP4R1-204ENST00000577393 MT4P47944 62 aa8.84□□□□□ -0.99
PPP4R1-204ENST00000577393 KRTAP23-1A1A580 65 aa8.83□□□□□ -1
PPP4R1-204ENST00000577393 KRTAP5-4Q6L8H1 288 aa8.81□□□□□ -1
PPP4R1-204ENST00000577393 HMCN1Q96RW7 5635 aa8.77□□□□□ -1.01
PPP4R1-204ENST00000577393 CDC42SE1Q9NRR8 79 aa8.77□□□□□ -1.01
PPP4R1-204ENST00000577393 ROMO1P60602 79 aa8.65□□□□□ -1.02
PPP4R1-204ENST00000577393 KRTAP19-4Q3LI73 84 aa8.65□□□□□ -1.02
PPP4R1-204ENST00000577393 KRTAP15-1Q3LI76 137 aa8.64□□□□□ -1.03
PPP4R1-204ENST00000577393 KRTAP4-6Q9BYQ5 205 aa8.61□□□□□ -1.03
PPP4R1-204ENST00000577393 KRTAP5-5Q701N2 237 aaPredicted RBP8.55□□□□□ -1.04
PPP4R1-204ENST00000577393 LOC100996750A0A140TA64 210 aa8.5□□□□□ -1.05
PPP4R1-204ENST00000577393 LCE3CQ5T5A8 94 aa8.48□□□□□ -1.05
PPP4R1-204ENST00000577393 AHNAK2Q8IVF2 5795 aa8.43□□□□□ -1.06
PPP4R1-204ENST00000577393 KRTAP5-10Q6L8G5 202 aa8.42□□□□□ -1.06
PPP4R1-204ENST00000577393 KRTAP20-2Q3LI61 65 aa8.31□□□□□ -1.08
PPP4R1-204ENST00000577393 KRTAP12-4P60329 112 aa8.28□□□□□ -1.08
PPP4R1-204ENST00000577393 SPRR5A0A1B0GTR4 108 aa8.27□□□□□ -1.09
PPP4R1-204ENST00000577393 SYNE1Q8NF91 8797 aaKnown RBP8.23□□□□□ -1.09
PPP4R1-204ENST00000577393 KRTAP5-7Q6L8G8 165 aa8.15□□□□□ -1.1
PPP4R1-204ENST00000577393 KRTAP5-3Q6L8H2 238 aa8.1□□□□□ -1.11
PPP4R1-204ENST00000577393 KRTAP9-6A8MVA2 160 aa8.01□□□□□ -1.13
PPP4R1-204ENST00000577393 MT1AP04731 61 aa8□□□□□ -1.13
PPP4R1-204ENST00000577393 KRTAP6-1Q3LI64 71 aa7.96□□□□□ -1.14
PPP4R1-204ENST00000577393 BRK1Q8WUW1 75 aa7.88□□□□□ -1.15
PPP4R1-204ENST00000577393 KRTAP5-2Q701N4 177 aa7.75□□□□□ -1.17
PPP4R1-204ENST00000577393 KRTAP9-4Q9BYQ2 154 aa7.73□□□□□ -1.17
PPP4R1-204ENST00000577393 KRTAP6-2Q3LI66 62 aa7.57□□□□□ -1.2
PPP4R1-204ENST00000577393 KRTAP4-11Q9BYQ6 195 aa7.55□□□□□ -1.2
PPP4R1-204ENST00000577393 PMAIP1Q13794 54 aa7.41□□□□□ -1.22
PPP4R1-204ENST00000577393 MT3P25713 68 aa7.32□□□□□ -1.24
PPP4R1-204ENST00000577393 KRTAP5-8O75690 187 aa7.29□□□□□ -1.24
PPP4R1-204ENST00000577393 OBSCNQ5VST9 7968 aa7.2□□□□□ -1.26
PPP4R1-204ENST00000577393 PRAC1Q96KF2 57 aa7.15□□□□□ -1.26
PPP4R1-204ENST00000577393 PRO0628Q9UI54 55 aa7.12□□□□□ -1.27
PPP4R1-204ENST00000577393 MUC5ACP98088 5654 aa7.1□□□□□ -1.27
PPP4R1-204ENST00000577393 AHNAKQ09666 5890 aaKnown RBP7.05□□□□□ -1.28
PPP4R1-204ENST00000577393 MUC5BQ9HC84 5762 aaPredicted RBP7□□□□□ -1.29
PPP4R1-204ENST00000577393 KRTAP5-1Q6L8H4 278 aa6.92□□□□□ -1.3
PPP4R1-204ENST00000577393 KRTAP9-9Q9BYP9 154 aa6.88□□□□□ -1.31
PPP4R1-204ENST00000577393 KTN1-AS1Q86SY8 53 aa6.72□□□□□ -1.33
PPP4R1-204ENST00000577393 LCE1EQ5T753 118 aa6.67□□□□□ -1.34
PPP4R1-204ENST00000577393 SVIPQ8NHG7 77 aa6.37□□□□□ -1.39
PPP4R1-204ENST00000577393 KRTAP4-2Q9BYR5 136 aa6.31□□□□□ -1.4
PPP4R1-204ENST00000577393 LCE1BQ5T7P3 118 aa6.29□□□□□ -1.4
PPP4R1-204ENST00000577393 LCE1CQ5T751 118 aa6.2□□□□□ -1.42
PPP4R1-204ENST00000577393 LCE3DQ9BYE3 92 aa6.14□□□□□ -1.43
PPP4R1-204ENST00000577393 LUZP6Q538Z0 58 aa5.99□□□□□ -1.45
PPP4R1-204ENST00000577393 LCE3EQ5T5B0 92 aa5.8□□□□□ -1.48
PPP4R1-204ENST00000577393 KRTAP4-12Q9BQ66 201 aa5.68□□□□□ -1.5
PPP4R1-204ENST00000577393 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.65□□□□□ -1.5
PPP4R1-204ENST00000577393 KRTAP5-11Q6L8G4 156 aa5.6□□□□□ -1.51
PPP4R1-204ENST00000577393 LCE1FQ5T754 118 aa5.4□□□□□ -1.54
PPP4R1-204ENST00000577393 KRTAP21-2Q3LI59 83 aa5.24□□□□□ -1.57
PPP4R1-204ENST00000577393 NDUFAF8A1L188 74 aa4.98□□□□□ -1.61
PPP4R1-204ENST00000577393 PHGR1C9JFL3 82 aa4.93□□□□□ -1.62
PPP4R1-204ENST00000577393 KRTAP4-4Q9BYR3 166 aa4.79□□□□□ -1.64
PPP4R1-204ENST00000577393 PRM1P04553 51 aa4.44□□□□□ -1.7
PPP4R1-204ENST00000577393 MUC19Q7Z5P9 8384 aa4.43□□□□□ -1.7
PPP4R1-204ENST00000577393 A0A0A0MQY5 61 aa4.29□□□□□ -1.72
PPP4R1-204ENST00000577393 INE1O15225 51 aa4.22□□□□□ -1.73
PPP4R1-204ENST00000577393 KRTAP21-1Q3LI58 79 aa3.73□□□□□ -1.81
PPP4R1-204ENST00000577393 MUC16Q8WXI7 14507 aa3.2□□□□□ -1.9
PPP4R1-204ENST00000577393 H3BS24 57 aa2.82□□□□□ -1.96
Retrieved 78 of 20,778 RNA–protein pairs in 106.6 ms