RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 LOC100996750A0A140TA64 210 aa5.62□□□□□ -1.51
TOM1L1-221ENST00000575882 KRTAP4-3Q9BYR4 195 aa5.62□□□□□ -1.51
TOM1L1-221ENST00000575882 MT1GP13640 62 aa5.56□□□□□ -1.52
TOM1L1-221ENST00000575882 FSIP2Q5CZC0 6907 aa5.51□□□□□ -1.53
TOM1L1-221ENST00000575882 MT1MQ8N339 61 aa5.51□□□□□ -1.53
TOM1L1-221ENST00000575882 KRTAP19-3Q7Z4W3 81 aa5.49□□□□□ -1.53
TOM1L1-221ENST00000575882 FCGBPQ9Y6R7 5405 aaPredicted RBP5.46□□□□□ -1.54
TOM1L1-221ENST00000575882 CRCT1Q9UGL9 99 aa5.45□□□□□ -1.54
TOM1L1-221ENST00000575882 MUC12Q9UKN1 5478 aa5.4□□□□□ -1.55
TOM1L1-221ENST00000575882 KRTAP12-4P60329 112 aa5.3□□□□□ -1.56
TOM1L1-221ENST00000575882 LCE5AQ5TCM9 118 aa5.28□□□□□ -1.56
TOM1L1-221ENST00000575882 SPRR2FQ96RM1 72 aa5.24□□□□□ -1.57
TOM1L1-221ENST00000575882 DSTQ03001 7570 aaKnown RBP5.19□□□□□ -1.58
TOM1L1-221ENST00000575882 LCE3BQ5TA77 95 aa5.18□□□□□ -1.58
TOM1L1-221ENST00000575882 KRTAP9-2Q9BYQ4 174 aa5.16□□□□□ -1.58
TOM1L1-221ENST00000575882 KRTAP4-9Q9BYQ8 210 aa5.09□□□□□ -1.59
TOM1L1-221ENST00000575882 KRTAP6-1Q3LI64 71 aa5.03□□□□□ -1.6
TOM1L1-221ENST00000575882 MT1AP04731 61 aa5.02□□□□□ -1.61
TOM1L1-221ENST00000575882 MACF1Q9UPN3 7388 aaKnown RBP4.99□□□□□ -1.61
TOM1L1-221ENST00000575882 SYNE1Q8NF91 8797 aaKnown RBP4.92□□□□□ -1.62
TOM1L1-221ENST00000575882 LCE3DQ9BYE3 92 aa4.91□□□□□ -1.62
TOM1L1-221ENST00000575882 LCE3EQ5T5B0 92 aa4.85□□□□□ -1.63
TOM1L1-221ENST00000575882 LCE1AQ5T7P2 110 aa4.85□□□□□ -1.63
TOM1L1-221ENST00000575882 KRTAP5-5Q701N2 237 aaPredicted RBP4.84□□□□□ -1.63
TOM1L1-221ENST00000575882 SYNE2Q8WXH0 6885 aaKnown RBP4.8□□□□□ -1.64
TOM1L1-221ENST00000575882 MDN1Q9NU22 5596 aa4.8□□□□□ -1.64
TOM1L1-221ENST00000575882 KRTAP5-9P26371 169 aa4.77□□□□□ -1.65
TOM1L1-221ENST00000575882 KRTAP9-7A8MTY7 169 aa4.76□□□□□ -1.65
TOM1L1-221ENST00000575882 KRTAP9-6A0A140TA67 174 aa4.75□□□□□ -1.65
TOM1L1-221ENST00000575882 SPRR2EP22531 72 aa4.72□□□□□ -1.65
TOM1L1-221ENST00000575882 SPRR2BP35325 72 aa4.72□□□□□ -1.65
TOM1L1-221ENST00000575882 SPRR2AP35326 72 aa4.72□□□□□ -1.65
TOM1L1-221ENST00000575882 PRM1P04553 51 aa4.71□□□□□ -1.66
TOM1L1-221ENST00000575882 KRTAP9-4Q9BYQ2 154 aa4.66□□□□□ -1.66
TOM1L1-221ENST00000575882 KRTAP2-2Q9BYT5 123 aa4.6□□□□□ -1.67
TOM1L1-221ENST00000575882 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.57□□□□□ -1.68
TOM1L1-221ENST00000575882 KRTAP6-2Q3LI66 62 aa4.54□□□□□ -1.68
TOM1L1-221ENST00000575882 SPRR2DP22532 72 aa4.5□□□□□ -1.69
TOM1L1-221ENST00000575882 KRTAP4-6Q9BYQ5 205 aa4.48□□□□□ -1.69
TOM1L1-221ENST00000575882 KRTAP6-3Q3LI67 103 aa4.47□□□□□ -1.69
TOM1L1-221ENST00000575882 MT3P25713 68 aa4.45□□□□□ -1.7
TOM1L1-221ENST00000575882 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
TOM1L1-221ENST00000575882 KRTAP5-4Q6L8H1 288 aa4.18□□□□□ -1.74
TOM1L1-221ENST00000575882 NEBP20929 6669 aa4.16□□□□□ -1.74
TOM1L1-221ENST00000575882 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
TOM1L1-221ENST00000575882 MT4P47944 62 aa3.99□□□□□ -1.77
TOM1L1-221ENST00000575882 KRTAP20-2Q3LI61 65 aa3.93□□□□□ -1.78
TOM1L1-221ENST00000575882 KRTAP5-2Q701N4 177 aa3.93□□□□□ -1.78
TOM1L1-221ENST00000575882 LCE1DQ5T752 114 aa3.92□□□□□ -1.78
TOM1L1-221ENST00000575882 LCE4AQ5TA78 99 aa3.86□□□□□ -1.79
TOM1L1-221ENST00000575882 KRTAP20-1Q3LI63 56 aa3.8□□□□□ -1.8
TOM1L1-221ENST00000575882 MUC5ACP98088 5654 aa3.74□□□□□ -1.81
TOM1L1-221ENST00000575882 KRTAP5-3Q6L8H2 238 aa3.73□□□□□ -1.81
TOM1L1-221ENST00000575882 HMCN1Q96RW7 5635 aa3.71□□□□□ -1.82
TOM1L1-221ENST00000575882 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
TOM1L1-221ENST00000575882 LCE1BQ5T7P3 118 aa3.6□□□□□ -1.83
TOM1L1-221ENST00000575882 KRTAP5-10Q6L8G5 202 aa3.57□□□□□ -1.84
TOM1L1-221ENST00000575882 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
TOM1L1-221ENST00000575882 KRTAP9-9Q9BYP9 154 aa3.51□□□□□ -1.85
TOM1L1-221ENST00000575882 KRTAP5-1Q6L8H4 278 aa3.5□□□□□ -1.85
TOM1L1-221ENST00000575882 KRTAP4-12Q9BQ66 201 aa3.5□□□□□ -1.85
TOM1L1-221ENST00000575882 KRTAP4-2Q9BYR5 136 aa3.42□□□□□ -1.86
TOM1L1-221ENST00000575882 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
TOM1L1-221ENST00000575882 KRTAP21-2Q3LI59 83 aa3.24□□□□□ -1.89
TOM1L1-221ENST00000575882 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.21□□□□□ -1.9
TOM1L1-221ENST00000575882 AHNAK2Q8IVF2 5795 aa3.14□□□□□ -1.91
TOM1L1-221ENST00000575882 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
TOM1L1-221ENST00000575882 KRTAP5-7Q6L8G8 165 aa3.02□□□□□ -1.93
TOM1L1-221ENST00000575882 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
TOM1L1-221ENST00000575882 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.93
TOM1L1-221ENST00000575882 GPR98Q8WXG9 6306 aa2.95□□□□□ -1.94
TOM1L1-221ENST00000575882 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.94
TOM1L1-221ENST00000575882 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
TOM1L1-221ENST00000575882 MUC5BQ9HC84 5762 aaPredicted RBP2.69□□□□□ -1.98
TOM1L1-221ENST00000575882 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
TOM1L1-221ENST00000575882 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
TOM1L1-221ENST00000575882 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 136.8 ms