RNA–Protein interactions for RNA: ENST00000575815.5

NCBP3-205, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 4,096 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-205ENST00000575815 FCGBPQ9Y6R7 5405 aaPredicted RBP2.95□□□□□ -1.94
NCBP3-205ENST00000575815 SYNE2Q8WXH0 6885 aaKnown RBP2.94□□□□□ -1.94
NCBP3-205ENST00000575815 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
NCBP3-205ENST00000575815 SYNE1Q8NF91 8797 aaKnown RBP2.93□□□□□ -1.94
NCBP3-205ENST00000575815 KRTAP9-6A0A140TA67 174 aa2.92□□□□□ -1.94
NCBP3-205ENST00000575815 MACF1Q9UPN3 7388 aaKnown RBP2.92□□□□□ -1.94
NCBP3-205ENST00000575815 MT1EP04732 61 aa2.92□□□□□ -1.94
NCBP3-205ENST00000575815 KRTAP19-7Q3SYF9 63 aa2.9□□□□□ -1.95
NCBP3-205ENST00000575815 MUC12Q9UKN1 5478 aa2.89□□□□□ -1.95
NCBP3-205ENST00000575815 MT1LQ93083 61 aa2.88□□□□□ -1.95
NCBP3-205ENST00000575815 MT1GP13640 62 aa2.88□□□□□ -1.95
NCBP3-205ENST00000575815 KRTAP19-3Q7Z4W3 81 aa2.87□□□□□ -1.95
NCBP3-205ENST00000575815 KRTAP4-3Q9BYR4 195 aa2.85□□□□□ -1.95
NCBP3-205ENST00000575815 SPRR2DP22532 72 aa2.84□□□□□ -1.96
NCBP3-205ENST00000575815 MT1MQ8N339 61 aa2.78□□□□□ -1.96
NCBP3-205ENST00000575815 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.78□□□□□ -1.97
NCBP3-205ENST00000575815 KRTAP19-4Q3LI73 84 aa2.77□□□□□ -1.97
NCBP3-205ENST00000575815 LOC100996750A0A140TA64 210 aa2.77□□□□□ -1.97
NCBP3-205ENST00000575815 SPRR5A0A1B0GTR4 108 aa2.75□□□□□ -1.97
NCBP3-205ENST00000575815 KRTAP9-7A8MTY7 169 aa2.74□□□□□ -1.97
NCBP3-205ENST00000575815 LCE3BQ5TA77 95 aa2.7□□□□□ -1.98
NCBP3-205ENST00000575815 LCE1AQ5T7P2 110 aa2.68□□□□□ -1.98
NCBP3-205ENST00000575815 KRTAP6-3Q3LI67 103 aa2.67□□□□□ -1.98
NCBP3-205ENST00000575815 MDN1Q9NU22 5596 aa2.65□□□□□ -1.99
NCBP3-205ENST00000575815 KRTAP9-6A8MVA2 160 aa2.65□□□□□ -1.99
NCBP3-205ENST00000575815 LCE5AQ5TCM9 118 aa2.64□□□□□ -1.99
NCBP3-205ENST00000575815 KRTAP12-4P60329 112 aa2.6□□□□□ -1.99
NCBP3-205ENST00000575815 MT4P47944 62 aa2.58□□□□□ -2
NCBP3-205ENST00000575815 KRTAP5-9P26371 169 aa2.55□□□□□ -2
NCBP3-205ENST00000575815 KRTAP20-1Q3LI63 56 aa2.47□□□□□ -2.01
NCBP3-205ENST00000575815 KRTAP6-1Q3LI64 71 aa2.47□□□□□ -2.01
NCBP3-205ENST00000575815 KRTAP4-9Q9BYQ8 210 aa2.47□□□□□ -2.01
NCBP3-205ENST00000575815 MT1AP04731 61 aa2.46□□□□□ -2.02
NCBP3-205ENST00000575815 NEBP20929 6669 aa2.45□□□□□ -2.02
NCBP3-205ENST00000575815 KRTAP2-3P0C7H8 128 aa2.44□□□□□ -2.02
NCBP3-205ENST00000575815 KRTAP2-4Q9BYR9 128 aa2.44□□□□□ -2.02
NCBP3-205ENST00000575815 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
NCBP3-205ENST00000575815 KRTAP2-1Q9BYU5 128 aa2.42□□□□□ -2.02
NCBP3-205ENST00000575815 KRTAP2-2Q9BYT5 123 aa2.4□□□□□ -2.02
NCBP3-205ENST00000575815 MT3P25713 68 aa2.39□□□□□ -2.03
NCBP3-205ENST00000575815 KRTAP6-2Q3LI66 62 aa2.35□□□□□ -2.03
NCBP3-205ENST00000575815 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
NCBP3-205ENST00000575815 KRTAP9-4Q9BYQ2 154 aa2.31□□□□□ -2.04
NCBP3-205ENST00000575815 KRTAP4-6Q9BYQ5 205 aa2.3□□□□□ -2.04
NCBP3-205ENST00000575815 LCE4AQ5TA78 99 aa2.29□□□□□ -2.04
NCBP3-205ENST00000575815 LCE1DQ5T752 114 aa2.26□□□□□ -2.05
NCBP3-205ENST00000575815 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
NCBP3-205ENST00000575815 LCE1BQ5T7P3 118 aa2.22□□□□□ -2.05
NCBP3-205ENST00000575815 KRTAP5-5Q701N2 237 aaPredicted RBP2.17□□□□□ -2.06
NCBP3-205ENST00000575815 KRTAP20-2Q3LI61 65 aa2.16□□□□□ -2.06
NCBP3-205ENST00000575815 GPR98Q8WXG9 6306 aa2.13□□□□□ -2.07
NCBP3-205ENST00000575815 PRM1P04553 51 aa2.12□□□□□ -2.07
NCBP3-205ENST00000575815 LCE1EQ5T753 118 aa2.11□□□□□ -2.07
NCBP3-205ENST00000575815 HMCN1Q96RW7 5635 aa2.08□□□□□ -2.08
NCBP3-205ENST00000575815 KRTAP5-4Q6L8H1 288 aa2.06□□□□□ -2.08
NCBP3-205ENST00000575815 LCE1FQ5T754 118 aa2.01□□□□□ -2.09
NCBP3-205ENST00000575815 MUC5ACP98088 5654 aa2□□□□□ -2.09
NCBP3-205ENST00000575815 KRTAP4-11Q9BYQ6 195 aa1.93□□□□□ -2.1
NCBP3-205ENST00000575815 KRTAP5-3Q6L8H2 238 aa1.89□□□□□ -2.11
NCBP3-205ENST00000575815 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
NCBP3-205ENST00000575815 KRTAP9-9Q9BYP9 154 aa1.84□□□□□ -2.11
NCBP3-205ENST00000575815 MUC5BQ9HC84 5762 aaPredicted RBP1.84□□□□□ -2.12
NCBP3-205ENST00000575815 KRTAP5-2Q701N4 177 aa1.83□□□□□ -2.12
NCBP3-205ENST00000575815 AHNAK2Q8IVF2 5795 aa1.83□□□□□ -2.12
NCBP3-205ENST00000575815 KRTAP5-10Q6L8G5 202 aa1.8□□□□□ -2.12
NCBP3-205ENST00000575815 KRTAP4-2Q9BYR5 136 aa1.78□□□□□ -2.12
NCBP3-205ENST00000575815 KRTAP4-12Q9BQ66 201 aa1.76□□□□□ -2.13
NCBP3-205ENST00000575815 KRTAP5-8O75690 187 aa1.75□□□□□ -2.13
NCBP3-205ENST00000575815 LCE1CQ5T751 118 aa1.74□□□□□ -2.13
NCBP3-205ENST00000575815 KRTAP4-4Q9BYR3 166 aa1.7□□□□□ -2.14
NCBP3-205ENST00000575815 AHNAKQ09666 5890 aaKnown RBP1.69□□□□□ -2.14
NCBP3-205ENST00000575815 KRTAP5-1Q6L8H4 278 aa1.66□□□□□ -2.14
NCBP3-205ENST00000575815 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.48□□□□□ -2.17
NCBP3-205ENST00000575815 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
NCBP3-205ENST00000575815 KRTAP5-11Q6L8G4 156 aa1.43□□□□□ -2.18
NCBP3-205ENST00000575815 PHGR1C9JFL3 82 aa1.24□□□□□ -2.21
NCBP3-205ENST00000575815 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
NCBP3-205ENST00000575815 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 244.7 ms