RNA–Protein interactions for RNA: ENST00000573023.6

SLC12A4-212, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-212ENST00000573023 SPRR2FQ96RM1 72 aa6.31□□□□□ -1.4
SLC12A4-212ENST00000573023 FCGBPQ9Y6R7 5405 aaPredicted RBP6.27□□□□□ -1.41
SLC12A4-212ENST00000573023 LOC100996750A0A140TA64 210 aa6.27□□□□□ -1.41
SLC12A4-212ENST00000573023 MUC12Q9UKN1 5478 aa6.27□□□□□ -1.41
SLC12A4-212ENST00000573023 KRTAP19-6Q3LI70 58 aa6.25□□□□□ -1.41
SLC12A4-212ENST00000573023 SYNE1Q8NF91 8797 aaKnown RBP6.24□□□□□ -1.41
SLC12A4-212ENST00000573023 KRTAP19-4Q3LI73 84 aa6.2□□□□□ -1.42
SLC12A4-212ENST00000573023 OBSCNQ5VST9 7968 aa6.12□□□□□ -1.43
SLC12A4-212ENST00000573023 KRTAP19-3Q7Z4W3 81 aa6.12□□□□□ -1.43
SLC12A4-212ENST00000573023 KRTAP2-3P0C7H8 128 aa6.07□□□□□ -1.44
SLC12A4-212ENST00000573023 KRTAP2-4Q9BYR9 128 aa6.07□□□□□ -1.44
SLC12A4-212ENST00000573023 KRTAP2-1Q9BYU5 128 aa6.07□□□□□ -1.44
SLC12A4-212ENST00000573023 MT1MQ8N339 61 aa6.07□□□□□ -1.44
SLC12A4-212ENST00000573023 LCE2DQ5TA82 110 aaPredicted RBP6□□□□□ -1.45
SLC12A4-212ENST00000573023 LCE3BQ5TA77 95 aa5.98□□□□□ -1.45
SLC12A4-212ENST00000573023 KRTAP12-4P60329 112 aa5.91□□□□□ -1.46
SLC12A4-212ENST00000573023 SYNE2Q8WXH0 6885 aaKnown RBP5.89□□□□□ -1.47
SLC12A4-212ENST00000573023 MACF1Q9UPN3 7388 aaKnown RBP5.88□□□□□ -1.47
SLC12A4-212ENST00000573023 KRTAP4-9Q9BYQ8 210 aa5.72□□□□□ -1.49
SLC12A4-212ENST00000573023 LCE5AQ5TCM9 118 aa5.72□□□□□ -1.49
SLC12A4-212ENST00000573023 SPRR2EP22531 72 aa5.71□□□□□ -1.5
SLC12A4-212ENST00000573023 SPRR2BP35325 72 aa5.71□□□□□ -1.5
SLC12A4-212ENST00000573023 SPRR2AP35326 72 aa5.71□□□□□ -1.5
SLC12A4-212ENST00000573023 KRTAP9-2Q9BYQ4 174 aa5.67□□□□□ -1.5
SLC12A4-212ENST00000573023 MDN1Q9NU22 5596 aa5.6□□□□□ -1.51
SLC12A4-212ENST00000573023 KRTAP6-1Q3LI64 71 aa5.53□□□□□ -1.52
SLC12A4-212ENST00000573023 LCE3DQ9BYE3 92 aa5.52□□□□□ -1.53
SLC12A4-212ENST00000573023 SPRR2DP22532 72 aa5.45□□□□□ -1.54
SLC12A4-212ENST00000573023 LCE1AQ5T7P2 110 aa5.45□□□□□ -1.54
SLC12A4-212ENST00000573023 MT1AP04731 61 aa5.41□□□□□ -1.54
SLC12A4-212ENST00000573023 LCE3EQ5T5B0 92 aa5.41□□□□□ -1.54
SLC12A4-212ENST00000573023 KRTAP9-6A0A140TA67 174 aa5.25□□□□□ -1.57
SLC12A4-212ENST00000573023 PRM1P04553 51 aa5.18□□□□□ -1.58
SLC12A4-212ENST00000573023 KRTAP5-9P26371 169 aa5.15□□□□□ -1.58
SLC12A4-212ENST00000573023 KRTAP9-7A8MTY7 169 aa5.14□□□□□ -1.59
SLC12A4-212ENST00000573023 KRTAP6-2Q3LI66 62 aa5.09□□□□□ -1.6
SLC12A4-212ENST00000573023 KRTAP9-4Q9BYQ2 154 aa5.08□□□□□ -1.6
SLC12A4-212ENST00000573023 MT3P25713 68 aa5.07□□□□□ -1.6
SLC12A4-212ENST00000573023 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.01□□□□□ -1.61
SLC12A4-212ENST00000573023 MT4P47944 62 aa4.97□□□□□ -1.61
SLC12A4-212ENST00000573023 KRTAP5-5Q701N2 237 aaPredicted RBP4.94□□□□□ -1.62
SLC12A4-212ENST00000573023 KRTAP6-3Q3LI67 103 aa4.94□□□□□ -1.62
SLC12A4-212ENST00000573023 KRTAP4-6Q9BYQ5 205 aa4.67□□□□□ -1.66
SLC12A4-212ENST00000573023 LCE1DQ5T752 114 aa4.59□□□□□ -1.67
SLC12A4-212ENST00000573023 NEBP20929 6669 aa4.51□□□□□ -1.69
SLC12A4-212ENST00000573023 LCE1BQ5T7P3 118 aa4.49□□□□□ -1.69
SLC12A4-212ENST00000573023 LCE4AQ5TA78 99 aa4.41□□□□□ -1.7
SLC12A4-212ENST00000573023 KRTAP20-2Q3LI61 65 aa4.41□□□□□ -1.7
SLC12A4-212ENST00000573023 KRTAP2-2Q9BYT5 123 aa4.37□□□□□ -1.71
SLC12A4-212ENST00000573023 KRTAP5-4Q6L8H1 288 aa4.35□□□□□ -1.71
SLC12A4-212ENST00000573023 KRTAP20-1Q3LI63 56 aa4.31□□□□□ -1.72
SLC12A4-212ENST00000573023 HMCN1Q96RW7 5635 aa4.28□□□□□ -1.72
SLC12A4-212ENST00000573023 MUC5ACP98088 5654 aa4.05□□□□□ -1.76
SLC12A4-212ENST00000573023 KRTAP5-2Q701N4 177 aa4.01□□□□□ -1.77
SLC12A4-212ENST00000573023 KRTAP4-11Q9BYQ6 195 aa3.98□□□□□ -1.77
SLC12A4-212ENST00000573023 MUC19Q7Z5P9 8384 aa3.97□□□□□ -1.77
SLC12A4-212ENST00000573023 KRTAP5-3Q6L8H2 238 aa3.93□□□□□ -1.78
SLC12A4-212ENST00000573023 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
SLC12A4-212ENST00000573023 KRTAP5-10Q6L8G5 202 aa3.69□□□□□ -1.82
SLC12A4-212ENST00000573023 GPR98Q8WXG9 6306 aa3.64□□□□□ -1.83
SLC12A4-212ENST00000573023 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
SLC12A4-212ENST00000573023 KRTAP4-2Q9BYR5 136 aa3.63□□□□□ -1.83
SLC12A4-212ENST00000573023 LCE1CQ5T751 118 aa3.59□□□□□ -1.83
SLC12A4-212ENST00000573023 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
SLC12A4-212ENST00000573023 AHNAK2Q8IVF2 5795 aa3.5□□□□□ -1.85
SLC12A4-212ENST00000573023 KRTAP4-12Q9BQ66 201 aa3.48□□□□□ -1.85
SLC12A4-212ENST00000573023 MUC5BQ9HC84 5762 aaPredicted RBP3.4□□□□□ -1.87
SLC12A4-212ENST00000573023 KRTAP21-2Q3LI59 83 aa3.36□□□□□ -1.87
SLC12A4-212ENST00000573023 KRTAP5-8O75690 187 aa3.36□□□□□ -1.87
SLC12A4-212ENST00000573023 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
SLC12A4-212ENST00000573023 KRTAP9-9Q9BYP9 154 aa3.25□□□□□ -1.89
SLC12A4-212ENST00000573023 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.16□□□□□ -1.9
SLC12A4-212ENST00000573023 KRTAP5-11Q6L8G4 156 aa3.06□□□□□ -1.92
SLC12A4-212ENST00000573023 KRTAP5-7Q6L8G8 165 aa2.98□□□□□ -1.93
SLC12A4-212ENST00000573023 KRTAP21-1Q3LI58 79 aa2.86□□□□□ -1.95
SLC12A4-212ENST00000573023 AHNAKQ09666 5890 aaKnown RBP2.71□□□□□ -1.98
SLC12A4-212ENST00000573023 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
SLC12A4-212ENST00000573023 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 36.8 ms