RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 INE1O15225 51 aa5.5□□□□□ -1.53
POLR2A-201ENST00000572844 KRTAP19-3Q7Z4W3 81 aa5.45□□□□□ -1.54
POLR2A-201ENST00000572844 MACF1Q9UPN3 7388 aaKnown RBP5.45□□□□□ -1.54
POLR2A-201ENST00000572844 MT1GP13640 62 aa5.44□□□□□ -1.54
POLR2A-201ENST00000572844 KRTAP2-3P0C7H8 128 aa5.43□□□□□ -1.54
POLR2A-201ENST00000572844 KRTAP2-4Q9BYR9 128 aa5.43□□□□□ -1.54
POLR2A-201ENST00000572844 KRTAP2-1Q9BYU5 128 aa5.43□□□□□ -1.54
POLR2A-201ENST00000572844 MT1MQ8N339 61 aa5.4□□□□□ -1.54
POLR2A-201ENST00000572844 MUC12Q9UKN1 5478 aa5.35□□□□□ -1.55
POLR2A-201ENST00000572844 KRTAP9-6A0A140TA67 174 aa5.32□□□□□ -1.56
POLR2A-201ENST00000572844 SPRR2FQ96RM1 72 aa5.31□□□□□ -1.56
POLR2A-201ENST00000572844 KRTAP4-3Q9BYR4 195 aa5.31□□□□□ -1.56
POLR2A-201ENST00000572844 LCE5AQ5TCM9 118 aa5.3□□□□□ -1.56
POLR2A-201ENST00000572844 SYNE2Q8WXH0 6885 aaKnown RBP5.3□□□□□ -1.56
POLR2A-201ENST00000572844 LOC100996750A0A140TA64 210 aa5.22□□□□□ -1.57
POLR2A-201ENST00000572844 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.2□□□□□ -1.58
POLR2A-201ENST00000572844 KRTAP5-9P26371 169 aa5.19□□□□□ -1.58
POLR2A-201ENST00000572844 MDN1Q9NU22 5596 aa5.11□□□□□ -1.59
POLR2A-201ENST00000572844 KRTAP6-3Q3LI67 103 aa5.06□□□□□ -1.6
POLR2A-201ENST00000572844 LCE1AQ5T7P2 110 aa5.06□□□□□ -1.6
POLR2A-201ENST00000572844 SPRR2EP22531 72 aa5.01□□□□□ -1.61
POLR2A-201ENST00000572844 SPRR2BP35325 72 aa5.01□□□□□ -1.61
POLR2A-201ENST00000572844 SPRR2AP35326 72 aa5.01□□□□□ -1.61
POLR2A-201ENST00000572844 DSTQ03001 7570 aaKnown RBP4.92□□□□□ -1.62
POLR2A-201ENST00000572844 KRTAP9-7A8MTY7 169 aa4.89□□□□□ -1.63
POLR2A-201ENST00000572844 MT1AP04731 61 aa4.86□□□□□ -1.63
POLR2A-201ENST00000572844 KRTAP5-5Q701N2 237 aaPredicted RBP4.84□□□□□ -1.64
POLR2A-201ENST00000572844 SPRR2DP22532 72 aa4.82□□□□□ -1.64
POLR2A-201ENST00000572844 KRTAP6-1Q3LI64 71 aa4.81□□□□□ -1.64
POLR2A-201ENST00000572844 LCE3BQ5TA77 95 aa4.77□□□□□ -1.65
POLR2A-201ENST00000572844 NEBP20929 6669 aa4.71□□□□□ -1.65
POLR2A-201ENST00000572844 KRTAP12-4P60329 112 aa4.67□□□□□ -1.66
POLR2A-201ENST00000572844 KRTAP9-4Q9BYQ2 154 aa4.59□□□□□ -1.67
POLR2A-201ENST00000572844 KRTAP4-9Q9BYQ8 210 aa4.58□□□□□ -1.68
POLR2A-201ENST00000572844 LCE3DQ9BYE3 92 aa4.52□□□□□ -1.69
POLR2A-201ENST00000572844 SYNE1Q8NF91 8797 aaKnown RBP4.49□□□□□ -1.69
POLR2A-201ENST00000572844 LCE3EQ5T5B0 92 aa4.45□□□□□ -1.7
POLR2A-201ENST00000572844 KRTAP5-4Q6L8H1 288 aa4.41□□□□□ -1.7
POLR2A-201ENST00000572844 MT3P25713 68 aa4.37□□□□□ -1.71
POLR2A-201ENST00000572844 KRTAP6-2Q3LI66 62 aa4.34□□□□□ -1.71
POLR2A-201ENST00000572844 KRTAP20-1Q3LI63 56 aa4.33□□□□□ -1.72
POLR2A-201ENST00000572844 KRTAP2-2Q9BYT5 123 aa4.33□□□□□ -1.72
POLR2A-201ENST00000572844 MT4P47944 62 aa4.22□□□□□ -1.73
POLR2A-201ENST00000572844 LCE4AQ5TA78 99 aa4.22□□□□□ -1.73
POLR2A-201ENST00000572844 KRTAP4-6Q9BYQ5 205 aa4.2□□□□□ -1.74
POLR2A-201ENST00000572844 LCE1DQ5T752 114 aa4.12□□□□□ -1.75
POLR2A-201ENST00000572844 HMCN1Q96RW7 5635 aa4.09□□□□□ -1.75
POLR2A-201ENST00000572844 PRM1P04553 51 aa4.08□□□□□ -1.76
POLR2A-201ENST00000572844 KRTAP20-2Q3LI61 65 aa4.08□□□□□ -1.76
POLR2A-201ENST00000572844 KRTAP5-2Q701N4 177 aa4.08□□□□□ -1.76
POLR2A-201ENST00000572844 OBSCNQ5VST9 7968 aa3.95□□□□□ -1.78
POLR2A-201ENST00000572844 KRTAP5-3Q6L8H2 238 aa3.93□□□□□ -1.78
POLR2A-201ENST00000572844 GPR98Q8WXG9 6306 aa3.87□□□□□ -1.79
POLR2A-201ENST00000572844 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
POLR2A-201ENST00000572844 AHNAK2Q8IVF2 5795 aa3.58□□□□□ -1.84
POLR2A-201ENST00000572844 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
POLR2A-201ENST00000572844 KRTAP4-11Q9BYQ6 195 aa3.53□□□□□ -1.84
POLR2A-201ENST00000572844 KRTAP5-10Q6L8G5 202 aa3.49□□□□□ -1.85
POLR2A-201ENST00000572844 LCE1CQ5T751 118 aa3.46□□□□□ -1.86
POLR2A-201ENST00000572844 LCE1BQ5T7P3 118 aa3.46□□□□□ -1.86
POLR2A-201ENST00000572844 KRTAP5-1Q6L8H4 278 aa3.45□□□□□ -1.86
POLR2A-201ENST00000572844 KRTAP4-2Q9BYR5 136 aa3.43□□□□□ -1.86
POLR2A-201ENST00000572844 KRTAP5-8O75690 187 aa3.39□□□□□ -1.87
POLR2A-201ENST00000572844 KRTAP5-7Q6L8G8 165 aa3.31□□□□□ -1.88
POLR2A-201ENST00000572844 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
POLR2A-201ENST00000572844 KRTAP21-2Q3LI59 83 aa3.15□□□□□ -1.91
POLR2A-201ENST00000572844 KRTAP9-9Q9BYP9 154 aa3.02□□□□□ -1.93
POLR2A-201ENST00000572844 KRTAP5-11Q6L8G4 156 aa3□□□□□ -1.93
POLR2A-201ENST00000572844 AHNAKQ09666 5890 aaKnown RBP2.99□□□□□ -1.93
POLR2A-201ENST00000572844 MUC5BQ9HC84 5762 aaPredicted RBP2.96□□□□□ -1.94
POLR2A-201ENST00000572844 KRTAP4-12Q9BQ66 201 aa2.8□□□□□ -1.96
POLR2A-201ENST00000572844 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
POLR2A-201ENST00000572844 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
POLR2A-201ENST00000572844 LCE1FQ5T754 118 aa2.59□□□□□ -2
POLR2A-201ENST00000572844 PHGR1C9JFL3 82 aa2.57□□□□□ -2
POLR2A-201ENST00000572844 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
POLR2A-201ENST00000572844 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 102.4 ms