RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 PP632Q6XCG6 107 aa5.73□□□□□ -1.49
NDE1-205ENST00000572756 MT1MQ8N339 61 aa5.72□□□□□ -1.49
NDE1-205ENST00000572756 MIR22HGQ0VDD5 57 aa5.67□□□□□ -1.5
NDE1-205ENST00000572756 SVIPQ8NHG7 77 aa5.66□□□□□ -1.5
NDE1-205ENST00000572756 Q1T7F1 81 aa5.61□□□□□ -1.51
NDE1-205ENST00000572756 V9GYY9 64 aa5.61□□□□□ -1.51
NDE1-205ENST00000572756 KRTAP4-9Q9BYQ8 210 aa5.59□□□□□ -1.51
NDE1-205ENST00000572756 PSPHP1O15172 72 aa5.58□□□□□ -1.52
NDE1-205ENST00000572756 KRTAP12-3P60328 96 aa5.58□□□□□ -1.52
NDE1-205ENST00000572756 KRTAP19-4Q3LI73 84 aa5.58□□□□□ -1.52
NDE1-205ENST00000572756 KRTAP4-3Q9BYR4 195 aa5.58□□□□□ -1.52
NDE1-205ENST00000572756 KRTAP25-1Q3LHN0 102 aa5.55□□□□□ -1.52
NDE1-205ENST00000572756 K7ERS5 55 aa5.52□□□□□ -1.53
NDE1-205ENST00000572756 LCE4AQ5TA78 99 aa5.5□□□□□ -1.53
NDE1-205ENST00000572756 KRTAP23-1A1A580 65 aa5.49□□□□□ -1.53
NDE1-205ENST00000572756 LCE1DQ5T752 114 aa5.49□□□□□ -1.53
NDE1-205ENST00000572756 KRTAP4-12Q9BQ66 201 aa5.49□□□□□ -1.53
NDE1-205ENST00000572756 KRTAP4-7Q9BYR0 210 aa5.47□□□□□ -1.53
NDE1-205ENST00000572756 KRTAP5-4Q6L8H1 288 aa5.45□□□□□ -1.54
NDE1-205ENST00000572756 MT4P47944 62 aa5.41□□□□□ -1.54
NDE1-205ENST00000572756 HMCN1Q96RW7 5635 aa5.38□□□□□ -1.55
NDE1-205ENST00000572756 A6NED7 52 aa5.38□□□□□ -1.55
NDE1-205ENST00000572756 GPR98Q8WXG9 6306 aa5.35□□□□□ -1.55
NDE1-205ENST00000572756 RPS28P62857 69 aaKnown RBP5.34□□□□□ -1.55
NDE1-205ENST00000572756 PCP4P48539 62 aa5.27□□□□□ -1.57
NDE1-205ENST00000572756 KRTAP5-5Q701N2 237 aaPredicted RBP5.27□□□□□ -1.57
NDE1-205ENST00000572756 CDC42SE1Q9NRR8 79 aa5.25□□□□□ -1.57
NDE1-205ENST00000572756 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
NDE1-205ENST00000572756 ROMO1P60602 79 aa5.18□□□□□ -1.58
NDE1-205ENST00000572756 AHNAK2Q8IVF2 5795 aa5.17□□□□□ -1.58
NDE1-205ENST00000572756 LCE3CQ5T5A8 94 aa5.15□□□□□ -1.59
NDE1-205ENST00000572756 KRTAP9-9Q9BYP9 154 aa5.14□□□□□ -1.59
NDE1-205ENST00000572756 KRTAP9-4Q9BYQ2 154 aa5.14□□□□□ -1.59
NDE1-205ENST00000572756 KRTAP20-2Q3LI61 65 aa5.12□□□□□ -1.59
NDE1-205ENST00000572756 SPRR5A0A1B0GTR4 108 aa5.1□□□□□ -1.59
NDE1-205ENST00000572756 KRTAP5-10Q6L8G5 202 aa5.09□□□□□ -1.59
NDE1-205ENST00000572756 KRTAP12-4P60329 112 aa5.06□□□□□ -1.6
NDE1-205ENST00000572756 SYNE1Q8NF91 8797 aaKnown RBP5.01□□□□□ -1.61
NDE1-205ENST00000572756 KRTAP5-3Q6L8H2 238 aa4.98□□□□□ -1.61
NDE1-205ENST00000572756 KRTAP9-6A8MVA2 160 aa4.9□□□□□ -1.63
NDE1-205ENST00000572756 MT1AP04731 61 aa4.9□□□□□ -1.63
NDE1-205ENST00000572756 KRTAP5-7Q6L8G8 165 aa4.88□□□□□ -1.63
NDE1-205ENST00000572756 KRTAP6-1Q3LI64 71 aa4.87□□□□□ -1.63
NDE1-205ENST00000572756 A0A0A0MQY5 61 aa4.86□□□□□ -1.63
NDE1-205ENST00000572756 KRTAP5-2Q701N4 177 aa4.79□□□□□ -1.64
NDE1-205ENST00000572756 KRTAP4-11Q9BYQ6 195 aa4.66□□□□□ -1.66
NDE1-205ENST00000572756 BRK1Q8WUW1 75 aa4.64□□□□□ -1.67
NDE1-205ENST00000572756 KRTAP6-2Q3LI66 62 aa4.63□□□□□ -1.67
NDE1-205ENST00000572756 KRTAP4-2Q9BYR5 136 aa4.55□□□□□ -1.68
NDE1-205ENST00000572756 KRTAP5-8O75690 187 aa4.51□□□□□ -1.69
NDE1-205ENST00000572756 MT3P25713 68 aa4.46□□□□□ -1.7
NDE1-205ENST00000572756 OBSCNQ5VST9 7968 aa4.43□□□□□ -1.7
NDE1-205ENST00000572756 PMAIP1Q13794 54 aa4.36□□□□□ -1.71
NDE1-205ENST00000572756 KRTAP5-1Q6L8H4 278 aa4.28□□□□□ -1.72
NDE1-205ENST00000572756 MUC5BQ9HC84 5762 aaPredicted RBP4.24□□□□□ -1.73
NDE1-205ENST00000572756 PRAC1Q96KF2 57 aa4.23□□□□□ -1.73
NDE1-205ENST00000572756 MUC5ACP98088 5654 aa4.21□□□□□ -1.74
NDE1-205ENST00000572756 AHNAKQ09666 5890 aaKnown RBP4.19□□□□□ -1.74
NDE1-205ENST00000572756 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
NDE1-205ENST00000572756 PRO0628Q9UI54 55 aa4.06□□□□□ -1.76
NDE1-205ENST00000572756 KTN1-AS1Q86SY8 53 aa3.89□□□□□ -1.79
NDE1-205ENST00000572756 LCE1BQ5T7P3 118 aa3.82□□□□□ -1.8
NDE1-205ENST00000572756 LCE1CQ5T751 118 aa3.81□□□□□ -1.8
NDE1-205ENST00000572756 NDUFAF8A1L188 74 aa3.71□□□□□ -1.82
NDE1-205ENST00000572756 LCE3DQ9BYE3 92 aa3.71□□□□□ -1.82
NDE1-205ENST00000572756 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
NDE1-205ENST00000572756 LUZP6Q538Z0 58 aa3.53□□□□□ -1.84
NDE1-205ENST00000572756 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
NDE1-205ENST00000572756 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.49□□□□□ -1.85
NDE1-205ENST00000572756 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
NDE1-205ENST00000572756 KRTAP21-2Q3LI59 83 aa3.22□□□□□ -1.89
NDE1-205ENST00000572756 PHGR1C9JFL3 82 aa2.98□□□□□ -1.93
NDE1-205ENST00000572756 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
NDE1-205ENST00000572756 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
NDE1-205ENST00000572756 PRM1P04553 51 aa2.66□□□□□ -1.98
NDE1-205ENST00000572756 INE1O15225 51 aa2.28□□□□□ -2.04
NDE1-205ENST00000572756 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
NDE1-205ENST00000572756 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 28.7 ms