RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 MT1GP13640 62 aa5.63□□□□□ -1.51
RAB40B-206ENST00000571995 KRTAP19-7Q3SYF9 63 aa5.62□□□□□ -1.51
RAB40B-206ENST00000571995 LOC100996750A0A140TA64 210 aa5.59□□□□□ -1.51
RAB40B-206ENST00000571995 KRTAP9-6A8MVA2 160 aa5.56□□□□□ -1.52
RAB40B-206ENST00000571995 MACF1Q9UPN3 7388 aaKnown RBP5.54□□□□□ -1.52
RAB40B-206ENST00000571995 MT1LQ93083 61 aa5.53□□□□□ -1.52
RAB40B-206ENST00000571995 MT1EP04732 61 aa5.53□□□□□ -1.52
RAB40B-206ENST00000571995 INE1O15225 51 aa5.48□□□□□ -1.53
RAB40B-206ENST00000571995 KRTAP19-6Q3LI70 58 aa5.37□□□□□ -1.55
RAB40B-206ENST00000571995 LCE3BQ5TA77 95 aa5.36□□□□□ -1.55
RAB40B-206ENST00000571995 KRTAP19-3Q7Z4W3 81 aa5.29□□□□□ -1.56
RAB40B-206ENST00000571995 MDN1Q9NU22 5596 aa5.27□□□□□ -1.57
RAB40B-206ENST00000571995 KRTAP9-2Q9BYQ4 174 aa5.26□□□□□ -1.57
RAB40B-206ENST00000571995 MT1MQ8N339 61 aa5.24□□□□□ -1.57
RAB40B-206ENST00000571995 SPRR2EP22531 72 aa5.22□□□□□ -1.57
RAB40B-206ENST00000571995 SPRR2BP35325 72 aa5.22□□□□□ -1.57
RAB40B-206ENST00000571995 SPRR2AP35326 72 aa5.22□□□□□ -1.57
RAB40B-206ENST00000571995 KRTAP4-9Q9BYQ8 210 aa5.14□□□□□ -1.59
RAB40B-206ENST00000571995 KRTAP12-4P60329 112 aa5.09□□□□□ -1.59
RAB40B-206ENST00000571995 KRTAP2-3P0C7H8 128 aa5.01□□□□□ -1.61
RAB40B-206ENST00000571995 KRTAP2-4Q9BYR9 128 aa5.01□□□□□ -1.61
RAB40B-206ENST00000571995 KRTAP2-1Q9BYU5 128 aa5.01□□□□□ -1.61
RAB40B-206ENST00000571995 SPRR2DP22532 72 aa4.96□□□□□ -1.62
RAB40B-206ENST00000571995 LCE5AQ5TCM9 118 aa4.89□□□□□ -1.63
RAB40B-206ENST00000571995 KRTAP19-4Q3LI73 84 aa4.89□□□□□ -1.63
RAB40B-206ENST00000571995 KRTAP6-1Q3LI64 71 aa4.82□□□□□ -1.64
RAB40B-206ENST00000571995 LCE1AQ5T7P2 110 aa4.8□□□□□ -1.64
RAB40B-206ENST00000571995 LCE3DQ9BYE3 92 aa4.75□□□□□ -1.65
RAB40B-206ENST00000571995 MT4P47944 62 aa4.69□□□□□ -1.66
RAB40B-206ENST00000571995 LCE3EQ5T5B0 92 aa4.61□□□□□ -1.67
RAB40B-206ENST00000571995 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.6□□□□□ -1.67
RAB40B-206ENST00000571995 KRTAP9-6A0A140TA67 174 aa4.6□□□□□ -1.67
RAB40B-206ENST00000571995 MT1AP04731 61 aa4.59□□□□□ -1.68
RAB40B-206ENST00000571995 KRTAP6-2Q3LI66 62 aa4.5□□□□□ -1.69
RAB40B-206ENST00000571995 KRTAP9-7A8MTY7 169 aa4.48□□□□□ -1.69
RAB40B-206ENST00000571995 PRM1P04553 51 aa4.47□□□□□ -1.69
RAB40B-206ENST00000571995 KRTAP5-9P26371 169 aa4.39□□□□□ -1.71
RAB40B-206ENST00000571995 MT3P25713 68 aa4.37□□□□□ -1.71
RAB40B-206ENST00000571995 KRTAP6-3Q3LI67 103 aa4.35□□□□□ -1.71
RAB40B-206ENST00000571995 KRTAP9-4Q9BYQ2 154 aa4.31□□□□□ -1.72
RAB40B-206ENST00000571995 NEBP20929 6669 aa4.31□□□□□ -1.72
RAB40B-206ENST00000571995 KRTAP4-6Q9BYQ5 205 aa4.25□□□□□ -1.73
RAB40B-206ENST00000571995 LCE1DQ5T752 114 aa4.24□□□□□ -1.73
RAB40B-206ENST00000571995 LCE4AQ5TA78 99 aa4.24□□□□□ -1.73
RAB40B-206ENST00000571995 MUC19Q7Z5P9 8384 aa4.22□□□□□ -1.73
RAB40B-206ENST00000571995 LCE1BQ5T7P3 118 aa4.19□□□□□ -1.74
RAB40B-206ENST00000571995 KRTAP5-5Q701N2 237 aaPredicted RBP4.15□□□□□ -1.75
RAB40B-206ENST00000571995 HMCN1Q96RW7 5635 aa3.97□□□□□ -1.77
RAB40B-206ENST00000571995 MUC5ACP98088 5654 aa3.94□□□□□ -1.78
RAB40B-206ENST00000571995 KRTAP20-1Q3LI63 56 aa3.92□□□□□ -1.78
RAB40B-206ENST00000571995 KRTAP2-2Q9BYT5 123 aa3.89□□□□□ -1.79
RAB40B-206ENST00000571995 KRTAP20-2Q3LI61 65 aa3.86□□□□□ -1.79
RAB40B-206ENST00000571995 KRTAP9-9Q9BYP9 154 aa3.69□□□□□ -1.82
RAB40B-206ENST00000571995 KRTAP5-4Q6L8H1 288 aa3.65□□□□□ -1.82
RAB40B-206ENST00000571995 KRTAP4-11Q9BYQ6 195 aa3.52□□□□□ -1.85
RAB40B-206ENST00000571995 KRTAP4-12Q9BQ66 201 aa3.51□□□□□ -1.85
RAB40B-206ENST00000571995 GPR98Q8WXG9 6306 aa3.45□□□□□ -1.86
RAB40B-206ENST00000571995 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
RAB40B-206ENST00000571995 AHNAK2Q8IVF2 5795 aa3.39□□□□□ -1.87
RAB40B-206ENST00000571995 MUC5BQ9HC84 5762 aaPredicted RBP3.36□□□□□ -1.87
RAB40B-206ENST00000571995 KRTAP5-3Q6L8H2 238 aa3.35□□□□□ -1.87
RAB40B-206ENST00000571995 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
RAB40B-206ENST00000571995 KRTAP5-2Q701N4 177 aa3.34□□□□□ -1.88
RAB40B-206ENST00000571995 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
RAB40B-206ENST00000571995 LCE1CQ5T751 118 aa3.13□□□□□ -1.91
RAB40B-206ENST00000571995 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
RAB40B-206ENST00000571995 KRTAP5-10Q6L8G5 202 aa3.1□□□□□ -1.91
RAB40B-206ENST00000571995 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
RAB40B-206ENST00000571995 KRTAP5-1Q6L8H4 278 aa3.03□□□□□ -1.92
RAB40B-206ENST00000571995 KRTAP21-2Q3LI59 83 aa2.85□□□□□ -1.95
RAB40B-206ENST00000571995 AHNAKQ09666 5890 aaKnown RBP2.72□□□□□ -1.97
RAB40B-206ENST00000571995 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
RAB40B-206ENST00000571995 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
RAB40B-206ENST00000571995 KRTAP5-7Q6L8G8 165 aa2.39□□□□□ -2.03
RAB40B-206ENST00000571995 KRTAP21-1Q3LI58 79 aa2.28□□□□□ -2.04
RAB40B-206ENST00000571995 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
RAB40B-206ENST00000571995 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 225 ms