RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 MACF1Q9UPN3 7388 aaKnown RBP6.8□□□□□ -1.32
RPAIN-210ENST00000571613 H3BS24 57 aa6.79□□□□□ -1.32
RPAIN-210ENST00000571613 KRTAP19-3Q7Z4W3 81 aa6.76□□□□□ -1.33
RPAIN-210ENST00000571613 NDUFAF8A1L188 74 aa6.74□□□□□ -1.33
RPAIN-210ENST00000571613 MT1GP13640 62 aa6.74□□□□□ -1.33
RPAIN-210ENST00000571613 KRTAP5-9P26371 169 aa6.73□□□□□ -1.33
RPAIN-210ENST00000571613 KRTAP9-7A8MTY7 169 aa6.71□□□□□ -1.34
RPAIN-210ENST00000571613 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.7□□□□□ -1.34
RPAIN-210ENST00000571613 LCE5AQ5TCM9 118 aa6.61□□□□□ -1.35
RPAIN-210ENST00000571613 MUC12Q9UKN1 5478 aa6.61□□□□□ -1.35
RPAIN-210ENST00000571613 MT1MQ8N339 61 aa6.61□□□□□ -1.35
RPAIN-210ENST00000571613 KRTAP4-7Q9BYR0 210 aa6.61□□□□□ -1.35
RPAIN-210ENST00000571613 KRTAP6-3Q3LI67 103 aa6.58□□□□□ -1.36
RPAIN-210ENST00000571613 SYNE2Q8WXH0 6885 aaKnown RBP6.58□□□□□ -1.36
RPAIN-210ENST00000571613 LCE1AQ5T7P2 110 aa6.49□□□□□ -1.37
RPAIN-210ENST00000571613 KRTAP9-6A8MVA2 160 aa6.44□□□□□ -1.38
RPAIN-210ENST00000571613 SPRR2EP22531 72 aa6.44□□□□□ -1.38
RPAIN-210ENST00000571613 SPRR2BP35325 72 aa6.44□□□□□ -1.38
RPAIN-210ENST00000571613 SPRR2AP35326 72 aa6.44□□□□□ -1.38
RPAIN-210ENST00000571613 KRTAP4-3Q9BYR4 195 aa6.39□□□□□ -1.39
RPAIN-210ENST00000571613 MDN1Q9NU22 5596 aa6.36□□□□□ -1.39
RPAIN-210ENST00000571613 SPRR2DP22532 72 aa6.21□□□□□ -1.42
RPAIN-210ENST00000571613 KRTAP4-12Q9BQ66 201 aa6.09□□□□□ -1.43
RPAIN-210ENST00000571613 KRTAP2-3P0C7H8 128 aa6.07□□□□□ -1.44
RPAIN-210ENST00000571613 KRTAP2-4Q9BYR9 128 aa6.07□□□□□ -1.44
RPAIN-210ENST00000571613 KRTAP2-1Q9BYU5 128 aa6.07□□□□□ -1.44
RPAIN-210ENST00000571613 A0A0A0MQY5 61 aa6.07□□□□□ -1.44
RPAIN-210ENST00000571613 DSTQ03001 7570 aaKnown RBP6.06□□□□□ -1.44
RPAIN-210ENST00000571613 NEBP20929 6669 aa6.04□□□□□ -1.44
RPAIN-210ENST00000571613 LCE3BQ5TA77 95 aa6.01□□□□□ -1.45
RPAIN-210ENST00000571613 KRTAP5-5Q701N2 237 aaPredicted RBP5.94□□□□□ -1.46
RPAIN-210ENST00000571613 MT1AP04731 61 aa5.89□□□□□ -1.47
RPAIN-210ENST00000571613 KRTAP9-9Q9BYP9 154 aa5.88□□□□□ -1.47
RPAIN-210ENST00000571613 KRTAP9-4Q9BYQ2 154 aa5.88□□□□□ -1.47
RPAIN-210ENST00000571613 KRTAP20-1Q3LI63 56 aa5.86□□□□□ -1.47
RPAIN-210ENST00000571613 KRTAP6-1Q3LI64 71 aa5.78□□□□□ -1.48
RPAIN-210ENST00000571613 INE1O15225 51 aa5.67□□□□□ -1.5
RPAIN-210ENST00000571613 KRTAP5-4Q6L8H1 288 aa5.65□□□□□ -1.51
RPAIN-210ENST00000571613 LCE1DQ5T752 114 aa5.63□□□□□ -1.51
RPAIN-210ENST00000571613 KRTAP2-2Q9BYT5 123 aa5.63□□□□□ -1.51
RPAIN-210ENST00000571613 KRTAP12-4P60329 112 aa5.57□□□□□ -1.52
RPAIN-210ENST00000571613 LCE4AQ5TA78 99 aa5.57□□□□□ -1.52
RPAIN-210ENST00000571613 SYNE1Q8NF91 8797 aaKnown RBP5.56□□□□□ -1.52
RPAIN-210ENST00000571613 KRTAP4-9Q9BYQ8 210 aa5.46□□□□□ -1.54
RPAIN-210ENST00000571613 KRTAP5-3Q6L8H2 238 aa5.42□□□□□ -1.54
RPAIN-210ENST00000571613 MT3P25713 68 aa5.37□□□□□ -1.55
RPAIN-210ENST00000571613 MT4P47944 62 aa5.35□□□□□ -1.55
RPAIN-210ENST00000571613 KRTAP6-2Q3LI66 62 aa5.31□□□□□ -1.56
RPAIN-210ENST00000571613 KRTAP4-2Q9BYR5 136 aa5.31□□□□□ -1.56
RPAIN-210ENST00000571613 KRTAP4-11Q9BYQ6 195 aa5.28□□□□□ -1.56
RPAIN-210ENST00000571613 KRTAP20-2Q3LI61 65 aa5.26□□□□□ -1.57
RPAIN-210ENST00000571613 LCE3DQ9BYE3 92 aa5.22□□□□□ -1.57
RPAIN-210ENST00000571613 KRTAP5-2Q701N4 177 aa5.14□□□□□ -1.59
RPAIN-210ENST00000571613 HMCN1Q96RW7 5635 aa5.12□□□□□ -1.59
RPAIN-210ENST00000571613 GPR98Q8WXG9 6306 aa5.12□□□□□ -1.59
RPAIN-210ENST00000571613 LCE3EQ5T5B0 92 aa5.1□□□□□ -1.59
RPAIN-210ENST00000571613 OBSCNQ5VST9 7968 aa4.77□□□□□ -1.65
RPAIN-210ENST00000571613 AHNAK2Q8IVF2 5795 aa4.67□□□□□ -1.66
RPAIN-210ENST00000571613 LCE1EQ5T753 118 aa4.65□□□□□ -1.66
RPAIN-210ENST00000571613 KRTAP5-10Q6L8G5 202 aa4.57□□□□□ -1.68
RPAIN-210ENST00000571613 PRM1P04553 51 aa4.45□□□□□ -1.7
RPAIN-210ENST00000571613 KRTAP5-7Q6L8G8 165 aa4.43□□□□□ -1.7
RPAIN-210ENST00000571613 KRTAP5-1Q6L8H4 278 aa4.41□□□□□ -1.7
RPAIN-210ENST00000571613 KRTAP5-8O75690 187 aa4.35□□□□□ -1.71
RPAIN-210ENST00000571613 LCE1CQ5T751 118 aa4.32□□□□□ -1.72
RPAIN-210ENST00000571613 LCE1BQ5T7P3 118 aa4.32□□□□□ -1.72
RPAIN-210ENST00000571613 MUC5ACP98088 5654 aa4.23□□□□□ -1.73
RPAIN-210ENST00000571613 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.06□□□□□ -1.76
RPAIN-210ENST00000571613 AHNAKQ09666 5890 aaKnown RBP3.91□□□□□ -1.78
RPAIN-210ENST00000571613 MUC5BQ9HC84 5762 aaPredicted RBP3.86□□□□□ -1.79
RPAIN-210ENST00000571613 KRTAP21-2Q3LI59 83 aa3.79□□□□□ -1.8
RPAIN-210ENST00000571613 KRTAP5-11Q6L8G4 156 aa3.79□□□□□ -1.8
RPAIN-210ENST00000571613 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
RPAIN-210ENST00000571613 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
RPAIN-210ENST00000571613 PHGR1C9JFL3 82 aa3.24□□□□□ -1.89
RPAIN-210ENST00000571613 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
RPAIN-210ENST00000571613 KRTAP21-1Q3LI58 79 aa2.75□□□□□ -1.97
RPAIN-210ENST00000571613 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 273.4 ms