RNA–Protein interactions for RNA: ENST00000570740.1

CDC27-211, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-211ENST00000570740 FAT3Q8TDW7 4589 aa1.79□□□□□ -2.12
CDC27-211ENST00000570740 LRP1Q07954 4544 aaKnown RBP1.78□□□□□ -2.12
CDC27-211ENST00000570740 HMCN2Q8NDA2 5059 aa1.77□□□□□ -2.13
CDC27-211ENST00000570740 KRTAP10-10P60014 251 aa1.77□□□□□ -2.13
CDC27-211ENST00000570740 GPR98Q8WXG9 6306 aa1.75□□□□□ -2.13
CDC27-211ENST00000570740 TNXBP22105 4242 aa1.75□□□□□ -2.13
CDC27-211ENST00000570740 TNP1P09430 55 aa1.74□□□□□ -2.13
CDC27-211ENST00000570740 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
CDC27-211ENST00000570740 C9orf92A6NGG3 77 aa1.72□□□□□ -2.13
CDC27-211ENST00000570740 LRP2P98164 4655 aa1.7□□□□□ -2.14
CDC27-211ENST00000570740 KRTAP5-7Q6L8G8 165 aa1.68□□□□□ -2.14
CDC27-211ENST00000570740 RNF213Q63HN8 5207 aa1.67□□□□□ -2.14
CDC27-211ENST00000570740 MUC2Q02817 5179 aa1.64□□□□□ -2.15
CDC27-211ENST00000570740 LPAP08519 4548 aa1.63□□□□□ -2.15
CDC27-211ENST00000570740 KRTAP4-1Q9BYQ7 146 aa1.62□□□□□ -2.15
CDC27-211ENST00000570740 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
CDC27-211ENST00000570740 KRTAP19-2Q3LHN2 52 aa1.6□□□□□ -2.15
CDC27-211ENST00000570740 FAT4Q6V0I7 4981 aa1.59□□□□□ -2.15
CDC27-211ENST00000570740 MUC17Q685J3 4493 aa1.59□□□□□ -2.15
CDC27-211ENST00000570740 MT1HP80294 61 aa1.58□□□□□ -2.16
CDC27-211ENST00000570740 M0R2T5 61 aa1.56□□□□□ -2.16
CDC27-211ENST00000570740 FLGP20930 4061 aaPredicted RBP1.5□□□□□ -2.17
CDC27-211ENST00000570740 KRTAP8-1Q8IUC2 63 aa1.5□□□□□ -2.17
CDC27-211ENST00000570740 MT2AP02795 61 aa1.48□□□□□ -2.17
CDC27-211ENST00000570740 CRCT1Q9UGL9 99 aa1.48□□□□□ -2.17
CDC27-211ENST00000570740 FSIP2Q5CZC0 6907 aa1.46□□□□□ -2.18
CDC27-211ENST00000570740 MT1FP04733 61 aa1.46□□□□□ -2.18
CDC27-211ENST00000570740 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
CDC27-211ENST00000570740 KRTAP12-3P60328 96 aa1.43□□□□□ -2.18
CDC27-211ENST00000570740 SPRR2GQ9BYE4 73 aa1.42□□□□□ -2.18
CDC27-211ENST00000570740 KRTAP19-8Q3LI54 63 aa1.41□□□□□ -2.18
CDC27-211ENST00000570740 KRTAP19-6Q3LI70 58 aa1.41□□□□□ -2.18
CDC27-211ENST00000570740 MACF1Q9UPN3 7388 aaKnown RBP1.41□□□□□ -2.18
CDC27-211ENST00000570740 KRTAP2-3P0C7H8 128 aa1.4□□□□□ -2.19
CDC27-211ENST00000570740 KRTAP2-4Q9BYR9 128 aa1.4□□□□□ -2.19
CDC27-211ENST00000570740 KRTAP2-1Q9BYU5 128 aa1.4□□□□□ -2.19
CDC27-211ENST00000570740 USH2AO75445 5202 aa1.39□□□□□ -2.19
CDC27-211ENST00000570740 AHNAKQ09666 5890 aaKnown RBP1.39□□□□□ -2.19
CDC27-211ENST00000570740 SSPOA2VEC9 5147 aa1.37□□□□□ -2.19
CDC27-211ENST00000570740 KRTAP12-4P60329 112 aa1.37□□□□□ -2.19
CDC27-211ENST00000570740 MT1BP07438 61 aa1.36□□□□□ -2.19
CDC27-211ENST00000570740 FCGBPQ9Y6R7 5405 aaPredicted RBP1.35□□□□□ -2.19
CDC27-211ENST00000570740 KRTAP6-3Q3LI67 103 aa1.33□□□□□ -2.2
CDC27-211ENST00000570740 NEBP20929 6669 aa1.3□□□□□ -2.2
CDC27-211ENST00000570740 MT1XP80297 61 aa1.29□□□□□ -2.2
CDC27-211ENST00000570740 AHNAK2Q8IVF2 5795 aa1.27□□□□□ -2.21
CDC27-211ENST00000570740 SYNE2Q8WXH0 6885 aaKnown RBP1.27□□□□□ -2.21
CDC27-211ENST00000570740 KRTAP19-5Q3LI72 72 aa1.23□□□□□ -2.21
CDC27-211ENST00000570740 MUC5BQ9HC84 5762 aaPredicted RBP1.22□□□□□ -2.21
CDC27-211ENST00000570740 SPRR2FQ96RM1 72 aa1.21□□□□□ -2.22
CDC27-211ENST00000570740 KRTAP20-1Q3LI63 56 aa1.2□□□□□ -2.22
CDC27-211ENST00000570740 KMT2DO14686 5537 aa1.19□□□□□ -2.22
CDC27-211ENST00000570740 MT1AP04731 61 aa1.19□□□□□ -2.22
CDC27-211ENST00000570740 SPRR2EP22531 72 aa1.19□□□□□ -2.22
CDC27-211ENST00000570740 SPRR2BP35325 72 aa1.19□□□□□ -2.22
CDC27-211ENST00000570740 SPRR2AP35326 72 aa1.19□□□□□ -2.22
CDC27-211ENST00000570740 DSTQ03001 7570 aaKnown RBP1.19□□□□□ -2.22
CDC27-211ENST00000570740 MT1EP04732 61 aa1.18□□□□□ -2.22
CDC27-211ENST00000570740 MUC12Q9UKN1 5478 aa1.16□□□□□ -2.22
CDC27-211ENST00000570740 PRM1P04553 51 aa1.15□□□□□ -2.23
CDC27-211ENST00000570740 MT1GP13640 62 aa1.15□□□□□ -2.23
CDC27-211ENST00000570740 SPRR2DP22532 72 aa1.15□□□□□ -2.23
CDC27-211ENST00000570740 KRTAP19-7Q3SYF9 63 aa1.15□□□□□ -2.23
CDC27-211ENST00000570740 MT1LQ93083 61 aa1.15□□□□□ -2.23
CDC27-211ENST00000570740 MDN1Q9NU22 5596 aa1.14□□□□□ -2.23
CDC27-211ENST00000570740 KRTAP19-3Q7Z4W3 81 aa1.14□□□□□ -2.23
CDC27-211ENST00000570740 MT1MQ8N339 61 aa1.08□□□□□ -2.24
CDC27-211ENST00000570740 KRTAP6-2Q3LI66 62 aa1.01□□□□□ -2.25
CDC27-211ENST00000570740 SYNE1Q8NF91 8797 aaKnown RBP1□□□□□ -2.25
CDC27-211ENST00000570740 KRTAP5-10Q6L8G5 202 aa1□□□□□ -2.25
CDC27-211ENST00000570740 MUC5ACP98088 5654 aa0.98□□□□□ -2.25
CDC27-211ENST00000570740 MT4P47944 62 aa0.97□□□□□ -2.25
CDC27-211ENST00000570740 HMCN1Q96RW7 5635 aa0.97□□□□□ -2.25
CDC27-211ENST00000570740 KRTAP20-2Q3LI61 65 aa0.95□□□□□ -2.26
CDC27-211ENST00000570740 KRTAP6-1Q3LI64 71 aa0.91□□□□□ -2.26
CDC27-211ENST00000570740 KRTAP21-1Q3LI58 79 aa0.81□□□□□ -2.28
CDC27-211ENST00000570740 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
CDC27-211ENST00000570740 PHGR1C9JFL3 82 aa0.59□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 125.6 ms