RNA–Protein interactions for RNA: ENST00000570473.5

TRIM25-203, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 498 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-203ENST00000570473 KRTAP5-9P26371 169 aa2.51□□□□□ -2.01
TRIM25-203ENST00000570473 MT1XP80297 61 aa2.51□□□□□ -2.01
TRIM25-203ENST00000570473 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
TRIM25-203ENST00000570473 KRTAP5-4Q6L8H1 288 aa2.45□□□□□ -2.02
TRIM25-203ENST00000570473 MT1LQ93083 61 aa2.45□□□□□ -2.02
TRIM25-203ENST00000570473 KRTAP5-1Q6L8H4 278 aa2.44□□□□□ -2.02
TRIM25-203ENST00000570473 LRP2P98164 4655 aa2.4□□□□□ -2.02
TRIM25-203ENST00000570473 SPRR2BP35325 72 aa2.4□□□□□ -2.03
TRIM25-203ENST00000570473 SPRR2AP35326 72 aa2.4□□□□□ -2.03
TRIM25-203ENST00000570473 SPRR2FQ96RM1 72 aa2.38□□□□□ -2.03
TRIM25-203ENST00000570473 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
TRIM25-203ENST00000570473 KRTAP6-2Q3LI66 62 aa2.35□□□□□ -2.03
TRIM25-203ENST00000570473 MT1HL1P0DM35 61 aa2.34□□□□□ -2.03
TRIM25-203ENST00000570473 SPRR2DP22532 72 aa2.34□□□□□ -2.03
TRIM25-203ENST00000570473 DNHD1Q96M86 4753 aa2.33□□□□□ -2.04
TRIM25-203ENST00000570473 MT1BP07438 61 aa2.29□□□□□ -2.04
TRIM25-203ENST00000570473 SYNE1Q8NF91 8797 aaKnown RBP2.28□□□□□ -2.04
TRIM25-203ENST00000570473 KRTAP4-1Q9BYQ7 146 aa2.27□□□□□ -2.05
TRIM25-203ENST00000570473 MT1HP80294 61 aa2.24□□□□□ -2.05
TRIM25-203ENST00000570473 SPRR2EP22531 72 aa2.23□□□□□ -2.05
TRIM25-203ENST00000570473 KRTAP19-7Q3SYF9 63 aa2.22□□□□□ -2.05
TRIM25-203ENST00000570473 HMCN2Q8NDA2 5059 aa2.18□□□□□ -2.06
TRIM25-203ENST00000570473 HYDINQ4G0P3 5121 aa2.14□□□□□ -2.07
TRIM25-203ENST00000570473 KRTAP5-2Q701N4 177 aa2.13□□□□□ -2.07
TRIM25-203ENST00000570473 KRTAP19-3Q7Z4W3 81 aa2.13□□□□□ -2.07
TRIM25-203ENST00000570473 MUC2Q02817 5179 aa2.12□□□□□ -2.07
TRIM25-203ENST00000570473 MT2AP02795 61 aa2.09□□□□□ -2.07
TRIM25-203ENST00000570473 OBSCNQ5VST9 7968 aa2.08□□□□□ -2.08
TRIM25-203ENST00000570473 MT1FP04733 61 aa2.07□□□□□ -2.08
TRIM25-203ENST00000570473 KRTAP4-3Q9BYR4 195 aa2.05□□□□□ -2.08
TRIM25-203ENST00000570473 MT1GP13640 62 aa2.03□□□□□ -2.08
TRIM25-203ENST00000570473 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
TRIM25-203ENST00000570473 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
TRIM25-203ENST00000570473 KMT2CQ8NEZ4 4911 aaKnown RBP2.01□□□□□ -2.09
TRIM25-203ENST00000570473 RYR3Q15413 4870 aa2.01□□□□□ -2.09
TRIM25-203ENST00000570473 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
TRIM25-203ENST00000570473 RYR1P21817 5038 aa1.95□□□□□ -2.1
TRIM25-203ENST00000570473 MT1MQ8N339 61 aa1.95□□□□□ -2.1
TRIM25-203ENST00000570473 HERC2O95714 4834 aa1.94□□□□□ -2.1
TRIM25-203ENST00000570473 BIRC6Q9NR09 4857 aa1.91□□□□□ -2.1
TRIM25-203ENST00000570473 RYR2Q92736 4967 aa1.85□□□□□ -2.11
TRIM25-203ENST00000570473 PCLOQ9Y6V0 5065 aa1.85□□□□□ -2.11
TRIM25-203ENST00000570473 KRTAP5-8O75690 187 aa1.84□□□□□ -2.11
TRIM25-203ENST00000570473 KRTAP6-1Q3LI64 71 aa1.84□□□□□ -2.11
TRIM25-203ENST00000570473 UBR4Q5T4S7 5183 aa1.81□□□□□ -2.12
TRIM25-203ENST00000570473 CRCT1Q9UGL9 99 aa1.79□□□□□ -2.12
TRIM25-203ENST00000570473 USH2AO75445 5202 aa1.76□□□□□ -2.13
TRIM25-203ENST00000570473 FAT4Q6V0I7 4981 aa1.72□□□□□ -2.13
TRIM25-203ENST00000570473 KRTAP5-10Q6L8G5 202 aa1.68□□□□□ -2.14
TRIM25-203ENST00000570473 RNF213Q63HN8 5207 aa1.64□□□□□ -2.15
TRIM25-203ENST00000570473 SSPOA2VEC9 5147 aa1.61□□□□□ -2.15
TRIM25-203ENST00000570473 EPPK1P58107 5090 aaKnown RBP1.59□□□□□ -2.15
TRIM25-203ENST00000570473 MDN1Q9NU22 5596 aa1.59□□□□□ -2.15
TRIM25-203ENST00000570473 ABCA13Q86UQ4 5058 aa1.57□□□□□ -2.16
TRIM25-203ENST00000570473 MUC19Q7Z5P9 8384 aa1.49□□□□□ -2.17
TRIM25-203ENST00000570473 KIAA1109Q2LD37 5005 aa1.48□□□□□ -2.17
TRIM25-203ENST00000570473 KRTAP5-7Q6L8G8 165 aa1.44□□□□□ -2.18
TRIM25-203ENST00000570473 FCGBPQ9Y6R7 5405 aaPredicted RBP1.44□□□□□ -2.18
TRIM25-203ENST00000570473 MUC5ACP98088 5654 aa1.42□□□□□ -2.18
TRIM25-203ENST00000570473 HMCN1Q96RW7 5635 aa1.39□□□□□ -2.19
TRIM25-203ENST00000570473 KMT2DO14686 5537 aa1.37□□□□□ -2.19
TRIM25-203ENST00000570473 KRTAP19-6Q3LI70 58 aa1.29□□□□□ -2.2
TRIM25-203ENST00000570473 KRTAP21-2Q3LI59 83 aa1.23□□□□□ -2.21
TRIM25-203ENST00000570473 MUC5BQ9HC84 5762 aaPredicted RBP1.08□□□□□ -2.24
TRIM25-203ENST00000570473 MUC12Q9UKN1 5478 aa1.05□□□□□ -2.24
TRIM25-203ENST00000570473 FSIP2Q5CZC0 6907 aa0.99□□□□□ -2.25
TRIM25-203ENST00000570473 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
TRIM25-203ENST00000570473 MACF1Q9UPN3 7388 aaKnown RBP0.89□□□□□ -2.27
TRIM25-203ENST00000570473 DSTQ03001 7570 aaKnown RBP0.85□□□□□ -2.27
TRIM25-203ENST00000570473 KRTAP20-2Q3LI61 65 aa0.84□□□□□ -2.27
TRIM25-203ENST00000570473 SYNE2Q8WXH0 6885 aaKnown RBP0.83□□□□□ -2.28
TRIM25-203ENST00000570473 KRTAP20-1Q3LI63 56 aa0.81□□□□□ -2.28
TRIM25-203ENST00000570473 NEBP20929 6669 aa0.8□□□□□ -2.28
TRIM25-203ENST00000570473 PHGR1C9JFL3 82 aa0.77□□□□□ -2.29
TRIM25-203ENST00000570473 MT4P47944 62 aa0.74□□□□□ -2.29
TRIM25-203ENST00000570473 AHNAK2Q8IVF2 5795 aa0.69□□□□□ -2.3
TRIM25-203ENST00000570473 GPR98Q8WXG9 6306 aa0.68□□□□□ -2.3
TRIM25-203ENST00000570473 AHNAKQ09666 5890 aaKnown RBP0.52□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 134.9 ms