RNA–Protein interactions for RNA: ENST00000570276.5

ULK3-222, Transcript of unc-51 like kinase 3, human

TSL 1 (best)

Gene ULK3, Length 2,951 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ULK3-222	ENST00000570276	KRTAP4-3	Q9BYR4	195 aa		5.74	□□□□□ -1.49
ULK3-222	ENST00000570276	MUC12	Q9UKN1	5478 aa		5.74	□□□□□ -1.49
ULK3-222	ENST00000570276	MT1E	P04732	61 aa		5.73	□□□□□ -1.49
ULK3-222	ENST00000570276	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	5.69	□□□□□ -1.5
ULK3-222	ENST00000570276	CRCT1	Q9UGL9	99 aa		5.67	□□□□□ -1.5
ULK3-222	ENST00000570276	KRTAP12-4	P60329	112 aa		5.64	□□□□□ -1.51
ULK3-222	ENST00000570276	MT1G	P13640	62 aa		5.6	□□□□□ -1.51
ULK3-222	ENST00000570276	SYNE1	Q8NF91	8797 aa	Known RBP	5.48	□□□□□ -1.53
ULK3-222	ENST00000570276	LCE2D	Q5TA82	110 aa	Predicted RBP	5.46	□□□□□ -1.53
ULK3-222	ENST00000570276	KRTAP4-9	Q9BYQ8	210 aa		5.39	□□□□□ -1.55
ULK3-222	ENST00000570276	OBSCN	Q5VST9	7968 aa		5.36	□□□□□ -1.55
ULK3-222	ENST00000570276	MT1M	Q8N339	61 aa		5.35	□□□□□ -1.55
ULK3-222	ENST00000570276	KRTAP19-6	Q3LI70	58 aa		5.33	□□□□□ -1.56
ULK3-222	ENST00000570276	KRTAP19-4	Q3LI73	84 aa		5.3	□□□□□ -1.56
ULK3-222	ENST00000570276	KRTAP19-3	Q7Z4W3	81 aa		5.29	□□□□□ -1.56
ULK3-222	ENST00000570276	LCE3B	Q5TA77	95 aa		5.25	□□□□□ -1.57
ULK3-222	ENST00000570276	KRTAP9-7	A8MTY7	169 aa		5.21	□□□□□ -1.58
ULK3-222	ENST00000570276	SYNE2	Q8WXH0	6885 aa	Known RBP	5.2	□□□□□ -1.58
ULK3-222	ENST00000570276	SPRR2F	Q96RM1	72 aa		5.18	□□□□□ -1.58
ULK3-222	ENST00000570276	MACF1	Q9UPN3	7388 aa	Known RBP	5.15	□□□□□ -1.58
ULK3-222	ENST00000570276	PRM1	P04553	51 aa		5.12	□□□□□ -1.59
ULK3-222	ENST00000570276	KRTAP9-2	Q9BYQ4	174 aa		5.11	□□□□□ -1.59
ULK3-222	ENST00000570276	MDN1	Q9NU22	5596 aa		5.08	□□□□□ -1.6
ULK3-222	ENST00000570276	LCE5A	Q5TCM9	118 aa		5.06	□□□□□ -1.6
ULK3-222	ENST00000570276	KRTAP6-1	Q3LI64	71 aa		5	□□□□□ -1.61
ULK3-222	ENST00000570276	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.95	□□□□□ -1.62
ULK3-222	ENST00000570276	KRTAP6-3	Q3LI67	103 aa		4.93	□□□□□ -1.62
ULK3-222	ENST00000570276	LCE1A	Q5T7P2	110 aa		4.9	□□□□□ -1.62
ULK3-222	ENST00000570276	KRTAP9-6	A0A140TA67	174 aa		4.86	□□□□□ -1.63
ULK3-222	ENST00000570276	LCE3D	Q9BYE3	92 aa		4.86	□□□□□ -1.63
ULK3-222	ENST00000570276	LCE3E	Q5T5B0	92 aa		4.81	□□□□□ -1.64
ULK3-222	ENST00000570276	MT1A	P04731	61 aa		4.75	□□□□□ -1.65
ULK3-222	ENST00000570276	KRTAP6-2	Q3LI66	62 aa		4.69	□□□□□ -1.66
ULK3-222	ENST00000570276	LCE1E	Q5T753	118 aa		4.68	□□□□□ -1.66
ULK3-222	ENST00000570276	KRTAP2-2	Q9BYT5	123 aa		4.66	□□□□□ -1.66
ULK3-222	ENST00000570276	SPRR2E	P22531	72 aa		4.59	□□□□□ -1.68
ULK3-222	ENST00000570276	SPRR2B	P35325	72 aa		4.59	□□□□□ -1.68
ULK3-222	ENST00000570276	SPRR2A	P35326	72 aa		4.59	□□□□□ -1.68
ULK3-222	ENST00000570276	KRTAP9-4	Q9BYQ2	154 aa		4.48	□□□□□ -1.69
ULK3-222	ENST00000570276	LCE1D	Q5T752	114 aa		4.44	□□□□□ -1.7
ULK3-222	ENST00000570276	KRTAP5-9	P26371	169 aa		4.41	□□□□□ -1.7
ULK3-222	ENST00000570276	SPRR2D	P22532	72 aa		4.35	□□□□□ -1.71
ULK3-222	ENST00000570276	MT3	P25713	68 aa		4.28	□□□□□ -1.72
ULK3-222	ENST00000570276	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.12	□□□□□ -1.75
ULK3-222	ENST00000570276	KRTAP4-6	Q9BYQ5	205 aa		4.05	□□□□□ -1.76
ULK3-222	ENST00000570276	MUC19	Q7Z5P9	8384 aa		4.04	□□□□□ -1.76
ULK3-222	ENST00000570276	MT4	P47944	62 aa		4.03	□□□□□ -1.76
ULK3-222	ENST00000570276	KRTAP4-11	Q9BYQ6	195 aa		3.92	□□□□□ -1.78
ULK3-222	ENST00000570276	KRTAP5-4	Q6L8H1	288 aa		3.87	□□□□□ -1.79
ULK3-222	ENST00000570276	NEB	P20929	6669 aa		3.82	□□□□□ -1.8
ULK3-222	ENST00000570276	MUC5AC	P98088	5654 aa		3.81	□□□□□ -1.8
ULK3-222	ENST00000570276	HMCN1	Q96RW7	5635 aa		3.79	□□□□□ -1.8
ULK3-222	ENST00000570276	KRTAP20-2	Q3LI61	65 aa		3.77	□□□□□ -1.81
ULK3-222	ENST00000570276	LCE1F	Q5T754	118 aa		3.75	□□□□□ -1.81
ULK3-222	ENST00000570276	LCE1B	Q5T7P3	118 aa		3.69	□□□□□ -1.82
ULK3-222	ENST00000570276	KRTAP5-2	Q701N4	177 aa		3.64	□□□□□ -1.83
ULK3-222	ENST00000570276	LCE4A	Q5TA78	99 aa		3.52	□□□□□ -1.85
ULK3-222	ENST00000570276	KRTAP5-3	Q6L8H2	238 aa		3.51	□□□□□ -1.85
ULK3-222	ENST00000570276	KRTAP5-10	Q6L8G5	202 aa		3.48	□□□□□ -1.85
ULK3-222	ENST00000570276	KRTAP20-1	Q3LI63	56 aa		3.45	□□□□□ -1.86
ULK3-222	ENST00000570276	KRTAP5-1	Q6L8H4	278 aa		3.3	□□□□□ -1.88
ULK3-222	ENST00000570276	KRTAP4-2	Q9BYR5	136 aa		3.3	□□□□□ -1.88
ULK3-222	ENST00000570276	KRTAP4-4	Q9BYR3	166 aa		3.19	□□□□□ -1.9
ULK3-222	ENST00000570276	LCE1C	Q5T751	118 aa		3.16	□□□□□ -1.9
ULK3-222	ENST00000570276	KRTAP21-2	Q3LI59	83 aa		3.14	□□□□□ -1.91
ULK3-222	ENST00000570276	KRTAP21-1	Q3LI58	79 aa		3.06	□□□□□ -1.92
ULK3-222	ENST00000570276	MUC5B	Q9HC84	5762 aa	Predicted RBP	3	□□□□□ -1.93
ULK3-222	ENST00000570276	AHNAK2	Q8IVF2	5795 aa		2.95	□□□□□ -1.94
ULK3-222	ENST00000570276	KRTAP4-12	Q9BQ66	201 aa		2.91	□□□□□ -1.94
ULK3-222	ENST00000570276	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.9	□□□□□ -1.94
ULK3-222	ENST00000570276	KRTAP5-8	O75690	187 aa		2.9	□□□□□ -1.95
ULK3-222	ENST00000570276	GPR98	Q8WXG9	6306 aa		2.72	□□□□□ -1.97
ULK3-222	ENST00000570276	KRTAP5-11	Q6L8G4	156 aa		2.67	□□□□□ -1.98
ULK3-222	ENST00000570276	KRTAP5-7	Q6L8G8	165 aa		2.67	□□□□□ -1.98
ULK3-222	ENST00000570276	KRTAP9-9	Q9BYP9	154 aa		2.37	□□□□□ -2.03
ULK3-222	ENST00000570276	PHGR1	C9JFL3	82 aa		2.36	□□□□□ -2.03
ULK3-222	ENST00000570276	AHNAK	Q09666	5890 aa	Known RBP	2.19	□□□□□ -2.06
ULK3-222	ENST00000570276	MUC16	Q8WXI7	14507 aa		1.64	□□□□□ -2.15

Retrieved 78 of 20,778 RNA–protein pairs in 344.7 ms