RNA–Protein interactions for RNA: ENST00000570146.3

TCF4-244, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-244ENST00000570146 KRTAP5-5Q701N2 237 aaPredicted RBP3.39□□□□□ -1.87
TCF4-244ENST00000570146 KRTAP13-4Q3LI77 160 aa3.38□□□□□ -1.87
TCF4-244ENST00000570146 OCR1Q9BZK8 76 aa3.38□□□□□ -1.87
TCF4-244ENST00000570146 C10orf95Q9H7T3 257 aa3.38□□□□□ -1.87
TCF4-244ENST00000570146 SYNE1Q8NF91 8797 aaKnown RBP3.38□□□□□ -1.87
TCF4-244ENST00000570146 A0A0A0MQY5 61 aa3.37□□□□□ -1.87
TCF4-244ENST00000570146 ETDBQ3ZM63 59 aa3.36□□□□□ -1.87
TCF4-244ENST00000570146 F8W1H4 67 aa3.35□□□□□ -1.87
TCF4-244ENST00000570146 SMIM6P0DI80 62 aa3.35□□□□□ -1.87
TCF4-244ENST00000570146 LCE3CQ5T5A8 94 aa3.35□□□□□ -1.87
TCF4-244ENST00000570146 SPINT4Q6UDR6 99 aa3.33□□□□□ -1.88
TCF4-244ENST00000570146 GTF2H5Q6ZYL4 71 aa3.32□□□□□ -1.88
TCF4-244ENST00000570146 KRTAP5-8O75690 187 aa3.31□□□□□ -1.88
TCF4-244ENST00000570146 FAM240AA0A1B0GVK7 77 aa3.3□□□□□ -1.88
TCF4-244ENST00000570146 LCE3AQ5TA76 89 aa3.3□□□□□ -1.88
TCF4-244ENST00000570146 COL5A1-AS1Q5SY13 56 aa3.29□□□□□ -1.88
TCF4-244ENST00000570146 TNP1P09430 55 aa3.25□□□□□ -1.89
TCF4-244ENST00000570146 LINC00643Q86TS7 51 aa3.25□□□□□ -1.89
TCF4-244ENST00000570146 SCGB1A1P11684 91 aa3.24□□□□□ -1.89
TCF4-244ENST00000570146 KRTAP12-3P60328 96 aa3.22□□□□□ -1.89
TCF4-244ENST00000570146 SEC61GP60059 68 aa3.21□□□□□ -1.9
TCF4-244ENST00000570146 KRTAP12-1P59990 96 aa3.19□□□□□ -1.9
TCF4-244ENST00000570146 SERP1Q9Y6X1 66 aa3.19□□□□□ -1.9
TCF4-244ENST00000570146 SPATA8Q6RVD6 105 aa3.18□□□□□ -1.9
TCF4-244ENST00000570146 A0A1B0GU33 70 aa3.12□□□□□ -1.91
TCF4-244ENST00000570146 SMIM26A0A096LP01 95 aa3.07□□□□□ -1.92
TCF4-244ENST00000570146 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
TCF4-244ENST00000570146 MT1AP04731 61 aa3.04□□□□□ -1.92
TCF4-244ENST00000570146 KRTAP6-1Q3LI64 71 aa3.03□□□□□ -1.92
TCF4-244ENST00000570146 SPANXA2-OT1Q8N9U9 137 aa3.03□□□□□ -1.92
TCF4-244ENST00000570146 SMIM20Q8N5G0 67 aa3.02□□□□□ -1.93
TCF4-244ENST00000570146 KRTAP6-2Q3LI66 62 aa3.01□□□□□ -1.93
TCF4-244ENST00000570146 KRTAP25-1Q3LHN0 102 aa2.96□□□□□ -1.94
TCF4-244ENST00000570146 SNURFQ9Y675 71 aa2.96□□□□□ -1.94
TCF4-244ENST00000570146 A8MU10 97 aa2.95□□□□□ -1.94
TCF4-244ENST00000570146 COA5Q86WW8 74 aa2.95□□□□□ -1.94
TCF4-244ENST00000570146 SERP2Q8N6R1 65 aa2.95□□□□□ -1.94
TCF4-244ENST00000570146 J3QR89 54 aa2.88□□□□□ -1.95
TCF4-244ENST00000570146 A0A1B0GU69 56 aa2.87□□□□□ -1.95
TCF4-244ENST00000570146 LOC105371267A0A1B0GV96 52 aa2.87□□□□□ -1.95
TCF4-244ENST00000570146 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
TCF4-244ENST00000570146 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
TCF4-244ENST00000570146 NDUFAF8A1L188 74 aa2.79□□□□□ -1.96
TCF4-244ENST00000570146 PCP4L1A6NKN8 68 aa2.78□□□□□ -1.96
TCF4-244ENST00000570146 PRAC1Q96KF2 57 aa2.75□□□□□ -1.97
TCF4-244ENST00000570146 PRR15LQ9BU68 103 aa2.74□□□□□ -1.97
TCF4-244ENST00000570146 H7BZZ5 65 aa2.73□□□□□ -1.97
TCF4-244ENST00000570146 A0A1B0GV90 55 aa2.62□□□□□ -1.99
TCF4-244ENST00000570146 K7ERS5 55 aa2.58□□□□□ -2
TCF4-244ENST00000570146 UQCR11O14957 56 aa2.55□□□□□ -2
TCF4-244ENST00000570146 RPS28P62857 69 aaKnown RBP2.51□□□□□ -2.01
TCF4-244ENST00000570146 K7ERU9 68 aa2.5□□□□□ -2.01
TCF4-244ENST00000570146 COX7CP15954 63 aa2.46□□□□□ -2.02
TCF4-244ENST00000570146 LINC01558Q9Y6Z2 57 aa2.45□□□□□ -2.02
TCF4-244ENST00000570146 MIR22HGQ0VDD5 57 aa2.43□□□□□ -2.02
TCF4-244ENST00000570146 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
TCF4-244ENST00000570146 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
TCF4-244ENST00000570146 CDC42SE1Q9NRR8 79 aa2.32□□□□□ -2.04
TCF4-244ENST00000570146 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
TCF4-244ENST00000570146 ATP5EP56381 51 aaPredicted RBP2.28□□□□□ -2.04
TCF4-244ENST00000570146 Q1T7F1 81 aa2.22□□□□□ -2.05
TCF4-244ENST00000570146 ROMO1P60602 79 aa2.21□□□□□ -2.06
TCF4-244ENST00000570146 ANAPC13Q9BS18 74 aa2.14□□□□□ -2.07
TCF4-244ENST00000570146 PSPHP1O15172 72 aa2.09□□□□□ -2.07
TCF4-244ENST00000570146 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
TCF4-244ENST00000570146 V9GYY9 64 aa2.07□□□□□ -2.08
TCF4-244ENST00000570146 CCDC179H3BU77 68 aa2.05□□□□□ -2.08
TCF4-244ENST00000570146 A6NED7 52 aa2.03□□□□□ -2.08
TCF4-244ENST00000570146 TMEM258P61165 79 aa2□□□□□ -2.09
TCF4-244ENST00000570146 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
TCF4-244ENST00000570146 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
TCF4-244ENST00000570146 BRK1Q8WUW1 75 aa1.35□□□□□ -2.19
TCF4-244ENST00000570146 LUZP6Q538Z0 58 aa1.16□□□□□ -2.22
TCF4-244ENST00000570146 PRM1P04553 51 aa1.08□□□□□ -2.24
TCF4-244ENST00000570146 PMAIP1Q13794 54 aa1.06□□□□□ -2.24
TCF4-244ENST00000570146 PRO0628Q9UI54 55 aa0.63□□□□□ -2.31
TCF4-244ENST00000570146 KTN1-AS1Q86SY8 53 aa0.59□□□□□ -2.31
TCF4-244ENST00000570146 INE1O15225 51 aa0.13□□□□□ -2.39
Retrieved 78 of 20,778 RNA–protein pairs in 167.8 ms