RNA–Protein interactions for RNA: ENST00000569298.1

KARS-211, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-211ENST00000569298 MUC2Q02817 5179 aa2.6□□□□□ -1.99
KARS-211ENST00000569298 LPAP08519 4548 aa2.58□□□□□ -2
KARS-211ENST00000569298 KRTAP8-1Q8IUC2 63 aa2.57□□□□□ -2
KARS-211ENST00000569298 FAT4Q6V0I7 4981 aa2.51□□□□□ -2.01
KARS-211ENST00000569298 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
KARS-211ENST00000569298 OBSCNQ5VST9 7968 aa2.47□□□□□ -2.01
KARS-211ENST00000569298 KRTAP2-3P0C7H8 128 aa2.46□□□□□ -2.02
KARS-211ENST00000569298 KRTAP2-4Q9BYR9 128 aa2.46□□□□□ -2.02
KARS-211ENST00000569298 KRTAP2-1Q9BYU5 128 aa2.46□□□□□ -2.02
KARS-211ENST00000569298 KRTAP4-3Q9BYR4 195 aa2.45□□□□□ -2.02
KARS-211ENST00000569298 LCE3AQ5TA76 89 aa2.44□□□□□ -2.02
KARS-211ENST00000569298 MUC17Q685J3 4493 aa2.42□□□□□ -2.02
KARS-211ENST00000569298 KRTAP12-3P60328 96 aa2.38□□□□□ -2.03
KARS-211ENST00000569298 M0R2T5 61 aa2.35□□□□□ -2.03
KARS-211ENST00000569298 FSIP2Q5CZC0 6907 aa2.31□□□□□ -2.04
KARS-211ENST00000569298 SPRR2GQ9BYE4 73 aa2.3□□□□□ -2.04
KARS-211ENST00000569298 KRTAP4-1Q9BYQ7 146 aa2.29□□□□□ -2.04
KARS-211ENST00000569298 FLGP20930 4061 aaPredicted RBP2.28□□□□□ -2.04
KARS-211ENST00000569298 KRTAP5-5Q701N2 237 aaPredicted RBP2.27□□□□□ -2.05
KARS-211ENST00000569298 KRTAP5-2Q701N4 177 aa2.26□□□□□ -2.05
KARS-211ENST00000569298 KRTAP6-3Q3LI67 103 aa2.25□□□□□ -2.05
KARS-211ENST00000569298 MT1HP80294 61 aa2.23□□□□□ -2.05
KARS-211ENST00000569298 KRTAP19-2Q3LHN2 52 aa2.23□□□□□ -2.05
KARS-211ENST00000569298 CRCT1Q9UGL9 99 aa2.23□□□□□ -2.05
KARS-211ENST00000569298 USH2AO75445 5202 aa2.21□□□□□ -2.06
KARS-211ENST00000569298 SSPOA2VEC9 5147 aa2.19□□□□□ -2.06
KARS-211ENST00000569298 KRTAP12-4P60329 112 aa2.19□□□□□ -2.06
KARS-211ENST00000569298 KRTAP19-5Q3LI72 72 aa2.17□□□□□ -2.06
KARS-211ENST00000569298 LCE1CQ5T751 118 aa2.14□□□□□ -2.07
KARS-211ENST00000569298 LCE1BQ5T7P3 118 aa2.14□□□□□ -2.07
KARS-211ENST00000569298 LCE3DQ9BYE3 92 aa2.14□□□□□ -2.07
KARS-211ENST00000569298 FCGBPQ9Y6R7 5405 aaPredicted RBP2.14□□□□□ -2.07
KARS-211ENST00000569298 KRTAP19-8Q3LI54 63 aa2.13□□□□□ -2.07
KARS-211ENST00000569298 MT2AP02795 61 aa2.07□□□□□ -2.08
KARS-211ENST00000569298 MT1XP80297 61 aa2.06□□□□□ -2.08
KARS-211ENST00000569298 MT1FP04733 61 aa2.05□□□□□ -2.08
KARS-211ENST00000569298 MACF1Q9UPN3 7388 aaKnown RBP2.04□□□□□ -2.08
KARS-211ENST00000569298 MT1AP04731 61 aa2.02□□□□□ -2.09
KARS-211ENST00000569298 MT1EP04732 61 aa1.99□□□□□ -2.09
KARS-211ENST00000569298 SYNE2Q8WXH0 6885 aaKnown RBP1.98□□□□□ -2.09
KARS-211ENST00000569298 KRTAP19-6Q3LI70 58 aa1.98□□□□□ -2.09
KARS-211ENST00000569298 MUC12Q9UKN1 5478 aa1.98□□□□□ -2.09
KARS-211ENST00000569298 MDN1Q9NU22 5596 aa1.96□□□□□ -2.1
KARS-211ENST00000569298 PRM1P04553 51 aa1.95□□□□□ -2.1
KARS-211ENST00000569298 MT1BP07438 61 aa1.95□□□□□ -2.1
KARS-211ENST00000569298 MT1LQ93083 61 aa1.93□□□□□ -2.1
KARS-211ENST00000569298 KMT2DO14686 5537 aa1.92□□□□□ -2.1
KARS-211ENST00000569298 NEBP20929 6669 aa1.88□□□□□ -2.11
KARS-211ENST00000569298 KRTAP5-8O75690 187 aa1.86□□□□□ -2.11
KARS-211ENST00000569298 KRTAP19-7Q3SYF9 63 aa1.83□□□□□ -2.12
KARS-211ENST00000569298 KRTAP20-1Q3LI63 56 aa1.81□□□□□ -2.12
KARS-211ENST00000569298 KRTAP5-7Q6L8G8 165 aa1.76□□□□□ -2.13
KARS-211ENST00000569298 SPRR2FQ96RM1 72 aa1.76□□□□□ -2.13
KARS-211ENST00000569298 SPRR2AP35326 72 aa1.75□□□□□ -2.13
KARS-211ENST00000569298 SPRR2EP22531 72 aa1.74□□□□□ -2.13
KARS-211ENST00000569298 SPRR2BP35325 72 aa1.74□□□□□ -2.13
KARS-211ENST00000569298 KRTAP6-2Q3LI66 62 aa1.73□□□□□ -2.13
KARS-211ENST00000569298 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
KARS-211ENST00000569298 SPRR2DP22532 72 aa1.69□□□□□ -2.14
KARS-211ENST00000569298 GPR98Q8WXG9 6306 aa1.68□□□□□ -2.14
KARS-211ENST00000569298 MT1GP13640 62 aa1.66□□□□□ -2.14
KARS-211ENST00000569298 SYNE1Q8NF91 8797 aaKnown RBP1.66□□□□□ -2.14
KARS-211ENST00000569298 DSTQ03001 7570 aaKnown RBP1.62□□□□□ -2.15
KARS-211ENST00000569298 HMCN1Q96RW7 5635 aa1.61□□□□□ -2.15
KARS-211ENST00000569298 MT1MQ8N339 61 aa1.6□□□□□ -2.15
KARS-211ENST00000569298 KRTAP19-3Q7Z4W3 81 aa1.56□□□□□ -2.16
KARS-211ENST00000569298 AHNAK2Q8IVF2 5795 aa1.54□□□□□ -2.16
KARS-211ENST00000569298 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
KARS-211ENST00000569298 KRTAP6-1Q3LI64 71 aa1.5□□□□□ -2.17
KARS-211ENST00000569298 MT4P47944 62 aa1.48□□□□□ -2.17
KARS-211ENST00000569298 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
KARS-211ENST00000569298 KRTAP5-10Q6L8G5 202 aa1.41□□□□□ -2.18
KARS-211ENST00000569298 KRTAP20-2Q3LI61 65 aa1.36□□□□□ -2.19
KARS-211ENST00000569298 MUC5BQ9HC84 5762 aaPredicted RBP1.32□□□□□ -2.2
KARS-211ENST00000569298 AHNAKQ09666 5890 aaKnown RBP1.31□□□□□ -2.2
KARS-211ENST00000569298 MUC5ACP98088 5654 aa1.27□□□□□ -2.21
KARS-211ENST00000569298 PHGR1C9JFL3 82 aa0.83□□□□□ -2.28
KARS-211ENST00000569298 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 14.7 ms