RNA–Protein interactions for RNA: ENST00000569045.1

CDR2-207, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 826 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-207ENST00000569045 HMCN1Q96RW7 5635 aa5.83□□□□□ -1.48
CDR2-207ENST00000569045 LOC100996750A0A140TA64 210 aa5.81□□□□□ -1.48
CDR2-207ENST00000569045 KRTAP4-6Q9BYQ5 205 aa5.81□□□□□ -1.48
CDR2-207ENST00000569045 MT4P47944 62 aa5.8□□□□□ -1.48
CDR2-207ENST00000569045 CCDC179H3BU77 68 aa5.76□□□□□ -1.49
CDR2-207ENST00000569045 LINC01558Q9Y6Z2 57 aa5.73□□□□□ -1.49
CDR2-207ENST00000569045 KRTAP4-3Q9BYR4 195 aa5.72□□□□□ -1.49
CDR2-207ENST00000569045 UQCR11O14957 56 aa5.68□□□□□ -1.5
CDR2-207ENST00000569045 KRTAP12-3P60328 96 aa5.68□□□□□ -1.5
CDR2-207ENST00000569045 KRTAP5-4Q6L8H1 288 aa5.67□□□□□ -1.5
CDR2-207ENST00000569045 AHNAK2Q8IVF2 5795 aa5.66□□□□□ -1.5
CDR2-207ENST00000569045 TMEM258P61165 79 aa5.59□□□□□ -1.51
CDR2-207ENST00000569045 KRTAP4-7Q9BYR0 210 aa5.56□□□□□ -1.52
CDR2-207ENST00000569045 KRTAP19-4Q3LI73 84 aa5.55□□□□□ -1.52
CDR2-207ENST00000569045 KRTAP25-1Q3LHN0 102 aa5.54□□□□□ -1.52
CDR2-207ENST00000569045 K7ERS5 55 aa5.53□□□□□ -1.52
CDR2-207ENST00000569045 MIR22HGQ0VDD5 57 aa5.52□□□□□ -1.53
CDR2-207ENST00000569045 KRTAP5-10Q6L8G5 202 aa5.48□□□□□ -1.53
CDR2-207ENST00000569045 KRTAP4-12Q9BQ66 201 aa5.41□□□□□ -1.54
CDR2-207ENST00000569045 KRTAP12-4P60329 112 aa5.39□□□□□ -1.55
CDR2-207ENST00000569045 KRTAP5-5Q701N2 237 aaPredicted RBP5.39□□□□□ -1.55
CDR2-207ENST00000569045 V9GYY9 64 aa5.39□□□□□ -1.55
CDR2-207ENST00000569045 SPRR5A0A1B0GTR4 108 aa5.38□□□□□ -1.55
CDR2-207ENST00000569045 KRTAP20-2Q3LI61 65 aa5.38□□□□□ -1.55
CDR2-207ENST00000569045 KRTAP5-3Q6L8H2 238 aa5.34□□□□□ -1.55
CDR2-207ENST00000569045 PSPHP1O15172 72 aa5.33□□□□□ -1.56
CDR2-207ENST00000569045 KRTAP23-1A1A580 65 aa5.31□□□□□ -1.56
CDR2-207ENST00000569045 KRTAP5-7Q6L8G8 165 aa5.3□□□□□ -1.56
CDR2-207ENST00000569045 KRTAP15-1Q3LI76 137 aa5.27□□□□□ -1.57
CDR2-207ENST00000569045 Q1T7F1 81 aa5.26□□□□□ -1.57
CDR2-207ENST00000569045 SYNE1Q8NF91 8797 aaKnown RBP5.22□□□□□ -1.57
CDR2-207ENST00000569045 LCE3CQ5T5A8 94 aa5.21□□□□□ -1.58
CDR2-207ENST00000569045 SVIPQ8NHG7 77 aa5.21□□□□□ -1.58
CDR2-207ENST00000569045 A6NED7 52 aa5.18□□□□□ -1.58
CDR2-207ENST00000569045 CDC42SE1Q9NRR8 79 aa5.17□□□□□ -1.58
CDR2-207ENST00000569045 KRTAP9-9Q9BYP9 154 aa5.1□□□□□ -1.59
CDR2-207ENST00000569045 KRTAP9-4Q9BYQ2 154 aa5.1□□□□□ -1.59
CDR2-207ENST00000569045 RPS28P62857 69 aaKnown RBP5.08□□□□□ -1.6
CDR2-207ENST00000569045 ROMO1P60602 79 aa5.05□□□□□ -1.6
CDR2-207ENST00000569045 MT1AP04731 61 aa5.03□□□□□ -1.6
CDR2-207ENST00000569045 KRTAP6-1Q3LI64 71 aa4.98□□□□□ -1.61
CDR2-207ENST00000569045 KRTAP4-11Q9BYQ6 195 aa4.96□□□□□ -1.62
CDR2-207ENST00000569045 KRTAP5-2Q701N4 177 aa4.94□□□□□ -1.62
CDR2-207ENST00000569045 KRTAP9-6A8MVA2 160 aa4.83□□□□□ -1.64
CDR2-207ENST00000569045 KRTAP6-2Q3LI66 62 aa4.8□□□□□ -1.64
CDR2-207ENST00000569045 KRTAP5-8O75690 187 aa4.76□□□□□ -1.65
CDR2-207ENST00000569045 AHNAKQ09666 5890 aaKnown RBP4.74□□□□□ -1.65
CDR2-207ENST00000569045 PCP4P48539 62 aa4.72□□□□□ -1.65
CDR2-207ENST00000569045 MUC5BQ9HC84 5762 aaPredicted RBP4.69□□□□□ -1.66
CDR2-207ENST00000569045 MUC5ACP98088 5654 aa4.68□□□□□ -1.66
CDR2-207ENST00000569045 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
CDR2-207ENST00000569045 MT3P25713 68 aa4.64□□□□□ -1.67
CDR2-207ENST00000569045 KRTAP4-2Q9BYR5 136 aa4.53□□□□□ -1.68
CDR2-207ENST00000569045 A0A0A0MQY5 61 aa4.51□□□□□ -1.69
CDR2-207ENST00000569045 KRTAP5-1Q6L8H4 278 aa4.45□□□□□ -1.7
CDR2-207ENST00000569045 LCE1EQ5T753 118 aa4.27□□□□□ -1.73
CDR2-207ENST00000569045 BRK1Q8WUW1 75 aa4.27□□□□□ -1.73
CDR2-207ENST00000569045 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
CDR2-207ENST00000569045 PMAIP1Q13794 54 aa4.01□□□□□ -1.77
CDR2-207ENST00000569045 LCE1CQ5T751 118 aa3.96□□□□□ -1.78
CDR2-207ENST00000569045 PRAC1Q96KF2 57 aa3.84□□□□□ -1.79
CDR2-207ENST00000569045 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
CDR2-207ENST00000569045 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
CDR2-207ENST00000569045 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.57□□□□□ -1.84
CDR2-207ENST00000569045 NDUFAF8A1L188 74 aa3.56□□□□□ -1.84
CDR2-207ENST00000569045 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
CDR2-207ENST00000569045 PRO0628Q9UI54 55 aa3.52□□□□□ -1.85
CDR2-207ENST00000569045 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
CDR2-207ENST00000569045 KTN1-AS1Q86SY8 53 aa3.43□□□□□ -1.86
CDR2-207ENST00000569045 LUZP6Q538Z0 58 aa3.41□□□□□ -1.86
CDR2-207ENST00000569045 KRTAP21-2Q3LI59 83 aa3.27□□□□□ -1.89
CDR2-207ENST00000569045 PHGR1C9JFL3 82 aa3.24□□□□□ -1.89
CDR2-207ENST00000569045 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
CDR2-207ENST00000569045 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
CDR2-207ENST00000569045 PRM1P04553 51 aa2.55□□□□□ -2
CDR2-207ENST00000569045 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
CDR2-207ENST00000569045 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
CDR2-207ENST00000569045 INE1O15225 51 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 158.8 ms