RNA–Protein interactions for RNA: ENST00000568369.5

FANCA-230, Transcript of FA complementation group A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene FANCA, Length 4,601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-230ENST00000568369 MT1EP04732 61 aa3.46□□□□□ -1.86
FANCA-230ENST00000568369 KRTAP19-3Q7Z4W3 81 aa3.46□□□□□ -1.86
FANCA-230ENST00000568369 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
FANCA-230ENST00000568369 LCE3EQ5T5B0 92 aa3.43□□□□□ -1.86
FANCA-230ENST00000568369 SPRR2DP22532 72 aa3.39□□□□□ -1.87
FANCA-230ENST00000568369 FSIP2Q5CZC0 6907 aa3.38□□□□□ -1.87
FANCA-230ENST00000568369 MT1MQ8N339 61 aa3.33□□□□□ -1.88
FANCA-230ENST00000568369 KRTAP19-6Q3LI70 58 aa3.29□□□□□ -1.88
FANCA-230ENST00000568369 KRTAP19-7Q3SYF9 63 aa3.29□□□□□ -1.88
FANCA-230ENST00000568369 LOC100996750A0A140TA64 210 aa3.25□□□□□ -1.89
FANCA-230ENST00000568369 KRTAP4-3Q9BYR4 195 aa3.23□□□□□ -1.89
FANCA-230ENST00000568369 LCE2AQ5TA79 106 aaPredicted RBP3.21□□□□□ -1.9
FANCA-230ENST00000568369 KRTAP2-3P0C7H8 128 aa3.2□□□□□ -1.9
FANCA-230ENST00000568369 KRTAP2-4Q9BYR9 128 aa3.2□□□□□ -1.9
FANCA-230ENST00000568369 KRTAP2-1Q9BYU5 128 aa3.2□□□□□ -1.9
FANCA-230ENST00000568369 MT3P25713 68 aa3.19□□□□□ -1.9
FANCA-230ENST00000568369 KRTAP9-6A8MVA2 160 aa3.18□□□□□ -1.9
FANCA-230ENST00000568369 PRM1P04553 51 aa3.16□□□□□ -1.9
FANCA-230ENST00000568369 LCE2DQ5TA82 110 aaPredicted RBP3.11□□□□□ -1.91
FANCA-230ENST00000568369 MT1AP04731 61 aa3.1□□□□□ -1.91
FANCA-230ENST00000568369 FCGBPQ9Y6R7 5405 aaPredicted RBP3.09□□□□□ -1.91
FANCA-230ENST00000568369 DSTQ03001 7570 aaKnown RBP3.07□□□□□ -1.92
FANCA-230ENST00000568369 KRTAP4-9Q9BYQ8 210 aa3.03□□□□□ -1.92
FANCA-230ENST00000568369 KRTAP9-2Q9BYQ4 174 aa3.01□□□□□ -1.93
FANCA-230ENST00000568369 MT4P47944 62 aa3□□□□□ -1.93
FANCA-230ENST00000568369 SSPOA2VEC9 5147 aa2.97□□□□□ -1.93
FANCA-230ENST00000568369 SYNE2Q8WXH0 6885 aaKnown RBP2.95□□□□□ -1.94
FANCA-230ENST00000568369 LCE1DQ5T752 114 aa2.93□□□□□ -1.94
FANCA-230ENST00000568369 LCE5AQ5TCM9 118 aa2.93□□□□□ -1.94
FANCA-230ENST00000568369 MUC12Q9UKN1 5478 aa2.93□□□□□ -1.94
FANCA-230ENST00000568369 KRTAP6-1Q3LI64 71 aa2.92□□□□□ -1.94
FANCA-230ENST00000568369 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
FANCA-230ENST00000568369 LCE1AQ5T7P2 110 aa2.91□□□□□ -1.94
FANCA-230ENST00000568369 KRTAP6-2Q3LI66 62 aa2.83□□□□□ -1.96
FANCA-230ENST00000568369 KRTAP9-4Q9BYQ2 154 aa2.83□□□□□ -1.96
FANCA-230ENST00000568369 KRTAP9-6A0A140TA67 174 aa2.82□□□□□ -1.96
FANCA-230ENST00000568369 KRTAP9-7A8MTY7 169 aa2.76□□□□□ -1.97
FANCA-230ENST00000568369 KRTAP6-3Q3LI67 103 aa2.75□□□□□ -1.97
FANCA-230ENST00000568369 MACF1Q9UPN3 7388 aaKnown RBP2.7□□□□□ -1.98
FANCA-230ENST00000568369 LCE4AQ5TA78 99 aa2.67□□□□□ -1.98
FANCA-230ENST00000568369 MUC19Q7Z5P9 8384 aa2.65□□□□□ -1.99
FANCA-230ENST00000568369 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.63□□□□□ -1.99
FANCA-230ENST00000568369 KRTAP20-1Q3LI63 56 aa2.62□□□□□ -1.99
FANCA-230ENST00000568369 MDN1Q9NU22 5596 aa2.6□□□□□ -1.99
FANCA-230ENST00000568369 KRTAP2-2Q9BYT5 123 aa2.56□□□□□ -2
FANCA-230ENST00000568369 KRTAP5-5Q701N2 237 aaPredicted RBP2.53□□□□□ -2
FANCA-230ENST00000568369 KRTAP5-9P26371 169 aa2.5□□□□□ -2.01
FANCA-230ENST00000568369 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
FANCA-230ENST00000568369 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
FANCA-230ENST00000568369 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
FANCA-230ENST00000568369 KRTAP4-6Q9BYQ5 205 aa2.35□□□□□ -2.03
FANCA-230ENST00000568369 NEBP20929 6669 aa2.33□□□□□ -2.04
FANCA-230ENST00000568369 KRTAP4-11Q9BYQ6 195 aa2.33□□□□□ -2.04
FANCA-230ENST00000568369 KRTAP20-2Q3LI61 65 aa2.33□□□□□ -2.04
FANCA-230ENST00000568369 GPR98Q8WXG9 6306 aa2.28□□□□□ -2.04
FANCA-230ENST00000568369 KRTAP9-9Q9BYP9 154 aa2.22□□□□□ -2.05
FANCA-230ENST00000568369 KRTAP5-4Q6L8H1 288 aa2.13□□□□□ -2.07
FANCA-230ENST00000568369 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
FANCA-230ENST00000568369 MUC5ACP98088 5654 aa2.04□□□□□ -2.08
FANCA-230ENST00000568369 KRTAP4-12Q9BQ66 201 aa2□□□□□ -2.09
FANCA-230ENST00000568369 KRTAP4-2Q9BYR5 136 aa2□□□□□ -2.09
FANCA-230ENST00000568369 HMCN1Q96RW7 5635 aa1.97□□□□□ -2.09
FANCA-230ENST00000568369 KRTAP5-3Q6L8H2 238 aa1.87□□□□□ -2.11
FANCA-230ENST00000568369 KRTAP5-10Q6L8G5 202 aa1.84□□□□□ -2.11
FANCA-230ENST00000568369 AHNAK2Q8IVF2 5795 aa1.82□□□□□ -2.12
FANCA-230ENST00000568369 KRTAP5-2Q701N4 177 aa1.81□□□□□ -2.12
FANCA-230ENST00000568369 KRTAP5-8O75690 187 aa1.7□□□□□ -2.14
FANCA-230ENST00000568369 KRTAP5-1Q6L8H4 278 aa1.68□□□□□ -2.14
FANCA-230ENST00000568369 KRTAP5-11Q6L8G4 156 aa1.6□□□□□ -2.15
FANCA-230ENST00000568369 MUC5BQ9HC84 5762 aaPredicted RBP1.59□□□□□ -2.15
FANCA-230ENST00000568369 KRTAP21-2Q3LI59 83 aa1.56□□□□□ -2.16
FANCA-230ENST00000568369 AHNAKQ09666 5890 aaKnown RBP1.53□□□□□ -2.16
FANCA-230ENST00000568369 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
FANCA-230ENST00000568369 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.48□□□□□ -2.17
FANCA-230ENST00000568369 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
FANCA-230ENST00000568369 KRTAP5-7Q6L8G8 165 aa1.32□□□□□ -2.2
FANCA-230ENST00000568369 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 73.8 ms