RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 LRP1Q07954 4544 aaKnown RBP1.64□□□□□ -2.15
LPCAT2-208ENST00000566915 LCE3BQ5TA77 95 aa1.62□□□□□ -2.15
LPCAT2-208ENST00000566915 KRTAP19-6Q3LI70 58 aa1.61□□□□□ -2.15
LPCAT2-208ENST00000566915 KRTAP19-5Q3LI72 72 aa1.61□□□□□ -2.15
LPCAT2-208ENST00000566915 SPRR2FQ96RM1 72 aa1.61□□□□□ -2.15
LPCAT2-208ENST00000566915 KRTAP19-2Q3LHN2 52 aa1.6□□□□□ -2.15
LPCAT2-208ENST00000566915 SPRR2EP22531 72 aa1.6□□□□□ -2.15
LPCAT2-208ENST00000566915 SPRR2BP35325 72 aa1.6□□□□□ -2.15
LPCAT2-208ENST00000566915 SPRR2AP35326 72 aa1.6□□□□□ -2.15
LPCAT2-208ENST00000566915 KRTAP10-7P60409 375 aaPredicted RBP1.58□□□□□ -2.16
LPCAT2-208ENST00000566915 LCE1AQ5T7P2 110 aa1.58□□□□□ -2.16
LPCAT2-208ENST00000566915 KRTAP6-3Q3LI67 103 aa1.58□□□□□ -2.16
LPCAT2-208ENST00000566915 SPRR2DP22532 72 aa1.57□□□□□ -2.16
LPCAT2-208ENST00000566915 GPR98Q8WXG9 6306 aa1.56□□□□□ -2.16
LPCAT2-208ENST00000566915 LRP2P98164 4655 aa1.55□□□□□ -2.16
LPCAT2-208ENST00000566915 HMCN2Q8NDA2 5059 aa1.55□□□□□ -2.16
LPCAT2-208ENST00000566915 MT1XP80297 61 aa1.54□□□□□ -2.16
LPCAT2-208ENST00000566915 KRTAP20-1Q3LI63 56 aa1.54□□□□□ -2.16
LPCAT2-208ENST00000566915 KRTAP5-4Q6L8H1 288 aa1.54□□□□□ -2.16
LPCAT2-208ENST00000566915 MT1BP07438 61 aa1.54□□□□□ -2.16
LPCAT2-208ENST00000566915 RNF213Q63HN8 5207 aa1.52□□□□□ -2.17
LPCAT2-208ENST00000566915 MT1GP13640 62 aa1.51□□□□□ -2.17
LPCAT2-208ENST00000566915 KRTAP2-3P0C7H8 128 aa1.5□□□□□ -2.17
LPCAT2-208ENST00000566915 KRTAP2-4Q9BYR9 128 aa1.5□□□□□ -2.17
LPCAT2-208ENST00000566915 KRTAP12-4P60329 112 aa1.49□□□□□ -2.17
LPCAT2-208ENST00000566915 MT1LQ93083 61 aa1.47□□□□□ -2.17
LPCAT2-208ENST00000566915 FAT4Q6V0I7 4981 aa1.46□□□□□ -2.18
LPCAT2-208ENST00000566915 LCE3EQ5T5B0 92 aa1.45□□□□□ -2.18
LPCAT2-208ENST00000566915 LCE3DQ9BYE3 92 aa1.45□□□□□ -2.18
LPCAT2-208ENST00000566915 KRTAP5-5Q701N2 237 aaPredicted RBP1.43□□□□□ -2.18
LPCAT2-208ENST00000566915 KRTAP2-2Q9BYT5 123 aa1.43□□□□□ -2.18
LPCAT2-208ENST00000566915 KRTAP2-1Q9BYU5 128 aa1.43□□□□□ -2.18
LPCAT2-208ENST00000566915 UBR4Q5T4S7 5183 aa1.42□□□□□ -2.18
LPCAT2-208ENST00000566915 KRTAP19-3Q7Z4W3 81 aa1.42□□□□□ -2.18
LPCAT2-208ENST00000566915 MUC2Q02817 5179 aa1.42□□□□□ -2.18
LPCAT2-208ENST00000566915 MT1EP04732 61 aa1.42□□□□□ -2.18
LPCAT2-208ENST00000566915 KRTAP5-8O75690 187 aa1.38□□□□□ -2.19
LPCAT2-208ENST00000566915 MT3P25713 68 aa1.35□□□□□ -2.19
LPCAT2-208ENST00000566915 MT1MQ8N339 61 aa1.35□□□□□ -2.19
LPCAT2-208ENST00000566915 SSPOA2VEC9 5147 aa1.32□□□□□ -2.2
LPCAT2-208ENST00000566915 KRTAP5-11Q6L8G4 156 aa1.31□□□□□ -2.2
LPCAT2-208ENST00000566915 MT1AP04731 61 aa1.3□□□□□ -2.2
LPCAT2-208ENST00000566915 KRTAP19-7Q3SYF9 63 aa1.3□□□□□ -2.2
LPCAT2-208ENST00000566915 NEBP20929 6669 aa1.3□□□□□ -2.2
LPCAT2-208ENST00000566915 LCE1FQ5T754 118 aa1.3□□□□□ -2.2
LPCAT2-208ENST00000566915 MT4P47944 62 aa1.29□□□□□ -2.2
LPCAT2-208ENST00000566915 PRM1P04553 51 aa1.29□□□□□ -2.2
LPCAT2-208ENST00000566915 SYNE2Q8WXH0 6885 aaKnown RBP1.28□□□□□ -2.2
LPCAT2-208ENST00000566915 KRTAP4-4Q9BYR3 166 aa1.27□□□□□ -2.21
LPCAT2-208ENST00000566915 OBSCNQ5VST9 7968 aa1.26□□□□□ -2.21
LPCAT2-208ENST00000566915 AHNAKQ09666 5890 aaKnown RBP1.26□□□□□ -2.21
LPCAT2-208ENST00000566915 USH2AO75445 5202 aa1.25□□□□□ -2.21
LPCAT2-208ENST00000566915 SYNE1Q8NF91 8797 aaKnown RBP1.2□□□□□ -2.22
LPCAT2-208ENST00000566915 FSIP2Q5CZC0 6907 aa1.2□□□□□ -2.22
LPCAT2-208ENST00000566915 KRTAP4-3Q9BYR4 195 aa1.19□□□□□ -2.22
LPCAT2-208ENST00000566915 KRTAP9-6A8MVA2 160 aa1.18□□□□□ -2.22
LPCAT2-208ENST00000566915 FCGBPQ9Y6R7 5405 aaPredicted RBP1.17□□□□□ -2.22
LPCAT2-208ENST00000566915 KRTAP6-1Q3LI64 71 aa1.15□□□□□ -2.23
LPCAT2-208ENST00000566915 KRTAP6-2Q3LI66 62 aa1.15□□□□□ -2.23
LPCAT2-208ENST00000566915 LCE1BQ5T7P3 118 aa1.14□□□□□ -2.23
LPCAT2-208ENST00000566915 KRTAP5-1Q6L8H4 278 aa1.13□□□□□ -2.23
LPCAT2-208ENST00000566915 MACF1Q9UPN3 7388 aaKnown RBP1.13□□□□□ -2.23
LPCAT2-208ENST00000566915 KRTAP20-2Q3LI61 65 aa1.1□□□□□ -2.23
LPCAT2-208ENST00000566915 KMT2DO14686 5537 aa1.08□□□□□ -2.24
LPCAT2-208ENST00000566915 LCE1EQ5T753 118 aa1.04□□□□□ -2.24
LPCAT2-208ENST00000566915 MDN1Q9NU22 5596 aa1.02□□□□□ -2.25
LPCAT2-208ENST00000566915 AHNAK2Q8IVF2 5795 aa1.02□□□□□ -2.25
LPCAT2-208ENST00000566915 MUC19Q7Z5P9 8384 aa0.98□□□□□ -2.25
LPCAT2-208ENST00000566915 KRTAP5-7Q6L8G8 165 aa0.97□□□□□ -2.25
LPCAT2-208ENST00000566915 LCE1CQ5T751 118 aa0.94□□□□□ -2.26
LPCAT2-208ENST00000566915 KRTAP5-10Q6L8G5 202 aa0.93□□□□□ -2.26
LPCAT2-208ENST00000566915 MUC12Q9UKN1 5478 aa0.9□□□□□ -2.26
LPCAT2-208ENST00000566915 DSTQ03001 7570 aaKnown RBP0.9□□□□□ -2.27
LPCAT2-208ENST00000566915 MUC5ACP98088 5654 aa0.89□□□□□ -2.27
LPCAT2-208ENST00000566915 PHGR1C9JFL3 82 aa0.74□□□□□ -2.29
LPCAT2-208ENST00000566915 KRTAP21-1Q3LI58 79 aa0.64□□□□□ -2.31
LPCAT2-208ENST00000566915 KRTAP21-2Q3LI59 83 aa0.62□□□□□ -2.31
LPCAT2-208ENST00000566915 MUC16Q8WXI7 14507 aa0.46□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 37 ms