RNA–Protein interactions for RNA: ENST00000566286.5

TCF4-232, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-232ENST00000566286 MT1BP07438 61 aa4.26□□□□□ -1.73
TCF4-232ENST00000566286 KRTAP10-7P60409 375 aaPredicted RBP4.15□□□□□ -1.74
TCF4-232ENST00000566286 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
TCF4-232ENST00000566286 USH2AO75445 5202 aa4.02□□□□□ -1.77
TCF4-232ENST00000566286 KRTAP19-5Q3LI72 72 aa4.02□□□□□ -1.77
TCF4-232ENST00000566286 LCE1DQ5T752 114 aa4.01□□□□□ -1.77
TCF4-232ENST00000566286 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
TCF4-232ENST00000566286 KRTAP5-3Q6L8H2 238 aa3.9□□□□□ -1.79
TCF4-232ENST00000566286 SSPOA2VEC9 5147 aa3.89□□□□□ -1.79
TCF4-232ENST00000566286 KRTAP4-8A0A0G2JLE6 195 aa3.86□□□□□ -1.79
TCF4-232ENST00000566286 KRTAP9-6A8MVA2 160 aa3.86□□□□□ -1.79
TCF4-232ENST00000566286 KRTAP2-3P0C7H8 128 aa3.85□□□□□ -1.79
TCF4-232ENST00000566286 KRTAP2-4Q9BYR9 128 aa3.85□□□□□ -1.79
TCF4-232ENST00000566286 KRTAP2-1Q9BYU5 128 aa3.85□□□□□ -1.79
TCF4-232ENST00000566286 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
TCF4-232ENST00000566286 KMT2DO14686 5537 aa3.81□□□□□ -1.8
TCF4-232ENST00000566286 KRTAP19-7Q3SYF9 63 aa3.81□□□□□ -1.8
TCF4-232ENST00000566286 KRTAP19-6Q3LI70 58 aa3.8□□□□□ -1.8
TCF4-232ENST00000566286 KRTAP4-7Q9BYR0 210 aa3.8□□□□□ -1.8
TCF4-232ENST00000566286 KRTAP4-9Q9BYQ8 210 aa3.76□□□□□ -1.81
TCF4-232ENST00000566286 FSIP2Q5CZC0 6907 aa3.75□□□□□ -1.81
TCF4-232ENST00000566286 MT1LQ93083 61 aa3.72□□□□□ -1.81
TCF4-232ENST00000566286 KRTAP6-3Q3LI67 103 aa3.71□□□□□ -1.81
TCF4-232ENST00000566286 MT1EP04732 61 aa3.7□□□□□ -1.82
TCF4-232ENST00000566286 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
TCF4-232ENST00000566286 FCGBPQ9Y6R7 5405 aaPredicted RBP3.65□□□□□ -1.83
TCF4-232ENST00000566286 KRTAP4-2Q9BYR5 136 aa3.6□□□□□ -1.83
TCF4-232ENST00000566286 MUC12Q9UKN1 5478 aa3.46□□□□□ -1.85
TCF4-232ENST00000566286 MT1GP13640 62 aa3.46□□□□□ -1.86
TCF4-232ENST00000566286 KRTAP4-3Q9BYR4 195 aa3.44□□□□□ -1.86
TCF4-232ENST00000566286 KRTAP12-4P60329 112 aa3.44□□□□□ -1.86
TCF4-232ENST00000566286 MT1MQ8N339 61 aa3.44□□□□□ -1.86
TCF4-232ENST00000566286 MACF1Q9UPN3 7388 aaKnown RBP3.43□□□□□ -1.86
TCF4-232ENST00000566286 KRTAP19-3Q7Z4W3 81 aa3.43□□□□□ -1.86
TCF4-232ENST00000566286 CRCT1Q9UGL9 99 aa3.43□□□□□ -1.86
TCF4-232ENST00000566286 SPRR2FQ96RM1 72 aa3.4□□□□□ -1.86
TCF4-232ENST00000566286 SYNE2Q8WXH0 6885 aaKnown RBP3.33□□□□□ -1.88
TCF4-232ENST00000566286 KRTAP5-9P26371 169 aa3.3□□□□□ -1.88
TCF4-232ENST00000566286 MT1AP04731 61 aa3.25□□□□□ -1.89
TCF4-232ENST00000566286 MDN1Q9NU22 5596 aa3.25□□□□□ -1.89
TCF4-232ENST00000566286 SPRR2EP22531 72 aa3.18□□□□□ -1.9
TCF4-232ENST00000566286 SPRR2BP35325 72 aa3.18□□□□□ -1.9
TCF4-232ENST00000566286 SPRR2AP35326 72 aa3.18□□□□□ -1.9
TCF4-232ENST00000566286 DSTQ03001 7570 aaKnown RBP3.17□□□□□ -1.9
TCF4-232ENST00000566286 KRTAP6-1Q3LI64 71 aa3.14□□□□□ -1.91
TCF4-232ENST00000566286 SYNE1Q8NF91 8797 aaKnown RBP3.1□□□□□ -1.91
TCF4-232ENST00000566286 SPRR2DP22532 72 aa3.05□□□□□ -1.92
TCF4-232ENST00000566286 KRTAP5-5Q701N2 237 aaPredicted RBP3.05□□□□□ -1.92
TCF4-232ENST00000566286 PRM1P04553 51 aa3.04□□□□□ -1.92
TCF4-232ENST00000566286 NEBP20929 6669 aa2.97□□□□□ -1.93
TCF4-232ENST00000566286 KRTAP6-2Q3LI66 62 aa2.9□□□□□ -1.94
TCF4-232ENST00000566286 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
TCF4-232ENST00000566286 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
TCF4-232ENST00000566286 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
TCF4-232ENST00000566286 KRTAP20-1Q3LI63 56 aa2.67□□□□□ -1.98
TCF4-232ENST00000566286 MT4P47944 62 aa2.66□□□□□ -1.98
TCF4-232ENST00000566286 KRTAP20-2Q3LI61 65 aa2.62□□□□□ -1.99
TCF4-232ENST00000566286 OBSCNQ5VST9 7968 aa2.62□□□□□ -1.99
TCF4-232ENST00000566286 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
TCF4-232ENST00000566286 KRTAP5-2Q701N4 177 aa2.59□□□□□ -2
TCF4-232ENST00000566286 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
TCF4-232ENST00000566286 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
TCF4-232ENST00000566286 MUC5ACP98088 5654 aa2.38□□□□□ -2.03
TCF4-232ENST00000566286 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.03
TCF4-232ENST00000566286 GPR98Q8WXG9 6306 aa2.31□□□□□ -2.04
TCF4-232ENST00000566286 KRTAP5-10Q6L8G5 202 aa2.27□□□□□ -2.05
TCF4-232ENST00000566286 AHNAK2Q8IVF2 5795 aa2.22□□□□□ -2.05
TCF4-232ENST00000566286 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
TCF4-232ENST00000566286 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
TCF4-232ENST00000566286 KRTAP5-7Q6L8G8 165 aa2.1□□□□□ -2.07
TCF4-232ENST00000566286 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
TCF4-232ENST00000566286 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
TCF4-232ENST00000566286 MUC5BQ9HC84 5762 aaPredicted RBP1.98□□□□□ -2.09
TCF4-232ENST00000566286 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
TCF4-232ENST00000566286 AHNAKQ09666 5890 aaKnown RBP1.78□□□□□ -2.13
TCF4-232ENST00000566286 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
TCF4-232ENST00000566286 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 187.1 ms