RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 KMT2CQ8NEZ4 4911 aaKnown RBP1.19□□□□□ -2.22
CNOT1-209ENST00000566240 RYR1P21817 5038 aa1.18□□□□□ -2.22
CNOT1-209ENST00000566240 KIAA1109Q2LD37 5005 aa1.17□□□□□ -2.22
CNOT1-209ENST00000566240 FAT1Q14517 4588 aa1.16□□□□□ -2.22
CNOT1-209ENST00000566240 TNXBP22105 4242 aa1.16□□□□□ -2.22
CNOT1-209ENST00000566240 TNP1P09430 55 aa1.16□□□□□ -2.22
CNOT1-209ENST00000566240 RYR3Q15413 4870 aa1.15□□□□□ -2.22
CNOT1-209ENST00000566240 LRP1Q07954 4544 aaKnown RBP1.14□□□□□ -2.23
CNOT1-209ENST00000566240 MT1HP80294 61 aa1.14□□□□□ -2.23
CNOT1-209ENST00000566240 FAT3Q8TDW7 4589 aa1.14□□□□□ -2.23
CNOT1-209ENST00000566240 KRTAP19-2Q3LHN2 52 aa1.13□□□□□ -2.23
CNOT1-209ENST00000566240 EPPK1P58107 5090 aaKnown RBP1.12□□□□□ -2.23
CNOT1-209ENST00000566240 SPRR2GQ9BYE4 73 aa1.12□□□□□ -2.23
CNOT1-209ENST00000566240 C10orf95Q9H7T3 257 aa1.12□□□□□ -2.23
CNOT1-209ENST00000566240 BIRC6Q9NR09 4857 aa1.12□□□□□ -2.23
CNOT1-209ENST00000566240 MYCBP2O75592 4640 aa1.11□□□□□ -2.23
CNOT1-209ENST00000566240 MT2AP02795 61 aa1.1□□□□□ -2.23
CNOT1-209ENST00000566240 MT1FP04733 61 aa1.09□□□□□ -2.23
CNOT1-209ENST00000566240 HERC2O95714 4834 aa1.09□□□□□ -2.24
CNOT1-209ENST00000566240 KRTAP19-8Q3LI54 63 aa1.08□□□□□ -2.24
CNOT1-209ENST00000566240 LPAP08519 4548 aa1.08□□□□□ -2.24
CNOT1-209ENST00000566240 LRP2P98164 4655 aa1.08□□□□□ -2.24
CNOT1-209ENST00000566240 ABCA13Q86UQ4 5058 aa1.07□□□□□ -2.24
CNOT1-209ENST00000566240 PCLOQ9Y6V0 5065 aa1.05□□□□□ -2.24
CNOT1-209ENST00000566240 MUC17Q685J3 4493 aa1.05□□□□□ -2.24
CNOT1-209ENST00000566240 MT1BP07438 61 aa1.03□□□□□ -2.24
CNOT1-209ENST00000566240 HERC1Q15751 4861 aa1.03□□□□□ -2.24
CNOT1-209ENST00000566240 MT1XP80297 61 aa1.02□□□□□ -2.25
CNOT1-209ENST00000566240 KRTAP19-3Q7Z4W3 81 aa1□□□□□ -2.25
CNOT1-209ENST00000566240 KRTAP8-1Q8IUC2 63 aa1□□□□□ -2.25
CNOT1-209ENST00000566240 HMCN2Q8NDA2 5059 aa1□□□□□ -2.25
CNOT1-209ENST00000566240 FLGP20930 4061 aaPredicted RBP0.98□□□□□ -2.25
CNOT1-209ENST00000566240 KRTAP19-6Q3LI70 58 aa0.95□□□□□ -2.26
CNOT1-209ENST00000566240 KRTAP19-5Q3LI72 72 aa0.95□□□□□ -2.26
CNOT1-209ENST00000566240 UBR4Q5T4S7 5183 aa0.93□□□□□ -2.26
CNOT1-209ENST00000566240 FAT4Q6V0I7 4981 aa0.93□□□□□ -2.26
CNOT1-209ENST00000566240 RNF213Q63HN8 5207 aa0.93□□□□□ -2.26
CNOT1-209ENST00000566240 MUC2Q02817 5179 aa0.92□□□□□ -2.26
CNOT1-209ENST00000566240 MT1EP04732 61 aa0.9□□□□□ -2.27
CNOT1-209ENST00000566240 SPRR2FQ96RM1 72 aa0.9□□□□□ -2.27
CNOT1-209ENST00000566240 KRTAP19-7Q3SYF9 63 aa0.89□□□□□ -2.27
CNOT1-209ENST00000566240 MT1LQ93083 61 aa0.89□□□□□ -2.27
CNOT1-209ENST00000566240 MT1GP13640 62 aa0.88□□□□□ -2.27
CNOT1-209ENST00000566240 SPRR2EP22531 72 aa0.85□□□□□ -2.27
CNOT1-209ENST00000566240 SPRR2BP35325 72 aa0.85□□□□□ -2.27
CNOT1-209ENST00000566240 SPRR2AP35326 72 aa0.85□□□□□ -2.27
CNOT1-209ENST00000566240 MT1MQ8N339 61 aa0.85□□□□□ -2.27
CNOT1-209ENST00000566240 KRTAP5-10Q6L8G5 202 aa0.84□□□□□ -2.27
CNOT1-209ENST00000566240 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
CNOT1-209ENST00000566240 SPRR2DP22532 72 aa0.82□□□□□ -2.28
CNOT1-209ENST00000566240 SSPOA2VEC9 5147 aa0.82□□□□□ -2.28
CNOT1-209ENST00000566240 KRTAP2-3P0C7H8 128 aa0.8□□□□□ -2.28
CNOT1-209ENST00000566240 KRTAP2-4Q9BYR9 128 aa0.8□□□□□ -2.28
CNOT1-209ENST00000566240 KRTAP2-1Q9BYU5 128 aa0.8□□□□□ -2.28
CNOT1-209ENST00000566240 MT1AP04731 61 aa0.78□□□□□ -2.28
CNOT1-209ENST00000566240 USH2AO75445 5202 aa0.78□□□□□ -2.29
CNOT1-209ENST00000566240 KRTAP6-1Q3LI64 71 aa0.74□□□□□ -2.29
CNOT1-209ENST00000566240 KMT2DO14686 5537 aa0.71□□□□□ -2.3
CNOT1-209ENST00000566240 KRTAP20-1Q3LI63 56 aa0.71□□□□□ -2.3
CNOT1-209ENST00000566240 AHNAK2Q8IVF2 5795 aa0.71□□□□□ -2.3
CNOT1-209ENST00000566240 FSIP2Q5CZC0 6907 aa0.7□□□□□ -2.3
CNOT1-209ENST00000566240 MT4P47944 62 aa0.69□□□□□ -2.3
CNOT1-209ENST00000566240 KRTAP21-1Q3LI58 79 aa0.68□□□□□ -2.3
CNOT1-209ENST00000566240 KRTAP6-2Q3LI66 62 aa0.68□□□□□ -2.3
CNOT1-209ENST00000566240 MACF1Q9UPN3 7388 aaKnown RBP0.68□□□□□ -2.3
CNOT1-209ENST00000566240 KRTAP20-2Q3LI61 65 aa0.66□□□□□ -2.3
CNOT1-209ENST00000566240 MUC12Q9UKN1 5478 aa0.65□□□□□ -2.31
CNOT1-209ENST00000566240 PRM1P04553 51 aa0.64□□□□□ -2.31
CNOT1-209ENST00000566240 DSTQ03001 7570 aaKnown RBP0.59□□□□□ -2.32
CNOT1-209ENST00000566240 SYNE2Q8WXH0 6885 aaKnown RBP0.58□□□□□ -2.32
CNOT1-209ENST00000566240 MDN1Q9NU22 5596 aa0.55□□□□□ -2.32
CNOT1-209ENST00000566240 NEBP20929 6669 aa0.53□□□□□ -2.32
CNOT1-209ENST00000566240 SYNE1Q8NF91 8797 aaKnown RBP0.53□□□□□ -2.32
CNOT1-209ENST00000566240 PHGR1C9JFL3 82 aa0.53□□□□□ -2.32
CNOT1-209ENST00000566240 AHNAKQ09666 5890 aaKnown RBP0.49□□□□□ -2.33
CNOT1-209ENST00000566240 MUC5BQ9HC84 5762 aaPredicted RBP0.45□□□□□ -2.34
CNOT1-209ENST00000566240 MUC5ACP98088 5654 aa0.42□□□□□ -2.34
CNOT1-209ENST00000566240 GPR98Q8WXG9 6306 aa0.34□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 255.5 ms