RNA–Protein interactions for RNA: ENST00000564850.1

RBFOX1-216, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 293 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-216ENST00000564850 CEP295Q9C0D2 2601 aa0.43□□□□□ -2.34
RBFOX1-216ENST00000564850 CEP350Q5VT06 3117 aa0.42□□□□□ -2.34
RBFOX1-216ENST00000564850 WDFY4Q6ZS81 3184 aa0.42□□□□□ -2.34
RBFOX1-216ENST00000564850 LAMA2P24043 3122 aaKnown RBP0.42□□□□□ -2.34
RBFOX1-216ENST00000564850 DNAH17Q9UFH2 4485 aa0.41□□□□□ -2.34
RBFOX1-216ENST00000564850 MT1LQ93083 61 aa0.41□□□□□ -2.34
RBFOX1-216ENST00000564850 DNAH5Q8TE73 4624 aa0.4□□□□□ -2.35
RBFOX1-216ENST00000564850 CENPEQ02224 2701 aa0.39□□□□□ -2.35
RBFOX1-216ENST00000564850 HERC1Q15751 4861 aa0.38□□□□□ -2.35
RBFOX1-216ENST00000564850 DYNC1H1Q14204 4646 aaKnown RBP0.38□□□□□ -2.35
RBFOX1-216ENST00000564850 DEFB4AO15263 64 aa0.38□□□□□ -2.35
RBFOX1-216ENST00000564850 TLN1Q9Y490 2541 aaKnown RBP0.38□□□□□ -2.35
RBFOX1-216ENST00000564850 LOC400499M0QZD8 3231 aa0.38□□□□□ -2.35
RBFOX1-216ENST00000564850 PHGR1C9JFL3 82 aa0.37□□□□□ -2.35
RBFOX1-216ENST00000564850 LRP2P98164 4655 aa0.37□□□□□ -2.35
RBFOX1-216ENST00000564850 MUC17Q685J3 4493 aa0.36□□□□□ -2.35
RBFOX1-216ENST00000564850 SYNE2Q8WXH0 6885 aaKnown RBP0.35□□□□□ -2.35
RBFOX1-216ENST00000564850 HTN3P15516 51 aa0.34□□□□□ -2.36
RBFOX1-216ENST00000564850 ASPMQ8IZT6 3477 aa0.34□□□□□ -2.36
RBFOX1-216ENST00000564850 MUC5ACP98088 5654 aa0.33□□□□□ -2.36
RBFOX1-216ENST00000564850 MT1XP80297 61 aa0.33□□□□□ -2.36
RBFOX1-216ENST00000564850 CFAP47Q6ZTR5 3102 aa0.33□□□□□ -2.36
RBFOX1-216ENST00000564850 MYO15AQ9UKN7 3530 aa0.33□□□□□ -2.36
RBFOX1-216ENST00000564850 USP34Q70CQ2 3546 aa0.32□□□□□ -2.36
RBFOX1-216ENST00000564850 EYSQ5T1H1 3165 aa0.32□□□□□ -2.36
RBFOX1-216ENST00000564850 MACF1Q9UPN3 7388 aaKnown RBP0.31□□□□□ -2.36
RBFOX1-216ENST00000564850 MYO9AB2RTY4 2548 aa0.31□□□□□ -2.36
RBFOX1-216ENST00000564850 SSPOA2VEC9 5147 aa0.3□□□□□ -2.36
RBFOX1-216ENST00000564850 FSIP2Q5CZC0 6907 aa0.3□□□□□ -2.36
RBFOX1-216ENST00000564850 PCNTO95613 3336 aa0.28□□□□□ -2.36
RBFOX1-216ENST00000564850 UTRNP46939 3433 aa0.28□□□□□ -2.36
RBFOX1-216ENST00000564850 SPRR2GQ9BYE4 73 aa0.28□□□□□ -2.36
RBFOX1-216ENST00000564850 KMT2DO14686 5537 aa0.28□□□□□ -2.37
RBFOX1-216ENST00000564850 SPEGQ15772 3267 aa0.27□□□□□ -2.37
RBFOX1-216ENST00000564850 STARD9Q9P2P6 4700 aa0.27□□□□□ -2.37
RBFOX1-216ENST00000564850 KMT2CQ8NEZ4 4911 aaKnown RBP0.25□□□□□ -2.37
RBFOX1-216ENST00000564850 PCLOQ9Y6V0 5065 aa0.23□□□□□ -2.37
RBFOX1-216ENST00000564850 VCANP13611 3396 aa0.23□□□□□ -2.37
RBFOX1-216ENST00000564850 VPS13AQ96RL7 3174 aa0.22□□□□□ -2.37
RBFOX1-216ENST00000564850 GOLGB1Q14789 3259 aaKnown RBP0.22□□□□□ -2.37
RBFOX1-216ENST00000564850 USH2AO75445 5202 aa0.21□□□□□ -2.38
RBFOX1-216ENST00000564850 MT1GP13640 62 aa0.2□□□□□ -2.38
RBFOX1-216ENST00000564850 KRTAP19-7Q3SYF9 63 aa0.2□□□□□ -2.38
RBFOX1-216ENST00000564850 UNC80Q8N2C7 3258 aa0.2□□□□□ -2.38
RBFOX1-216ENST00000564850 DNHD1Q96M86 4753 aa0.18□□□□□ -2.38
RBFOX1-216ENST00000564850 EP400Q96L91 3159 aa0.18□□□□□ -2.38
RBFOX1-216ENST00000564850 KRTAP19-8Q3LI54 63 aa0.17□□□□□ -2.38
RBFOX1-216ENST00000564850 WDFY3Q8IZQ1 3526 aa0.17□□□□□ -2.38
RBFOX1-216ENST00000564850 MT2AP02795 61 aa0.16□□□□□ -2.38
RBFOX1-216ENST00000564850 KRTAP6-1Q3LI64 71 aa0.16□□□□□ -2.38
RBFOX1-216ENST00000564850 MT1MQ8N339 61 aa0.16□□□□□ -2.38
RBFOX1-216ENST00000564850 BRCA2P51587 3418 aa0.15□□□□□ -2.39
RBFOX1-216ENST00000564850 UBR4Q5T4S7 5183 aa0.14□□□□□ -2.39
RBFOX1-216ENST00000564850 MUC2Q02817 5179 aa0.14□□□□□ -2.39
RBFOX1-216ENST00000564850 MT1HL1P0DM35 61 aa0.12□□□□□ -2.39
RBFOX1-216ENST00000564850 RYR1P21817 5038 aa0.11□□□□□ -2.39
RBFOX1-216ENST00000564850 CENPFP49454 3210 aa0.09□□□□□ -2.39
RBFOX1-216ENST00000564850 DNAH14Q0VDD8 3507 aa0.09□□□□□ -2.4
RBFOX1-216ENST00000564850 HERC2O95714 4834 aa0.05□□□□□ -2.4
RBFOX1-216ENST00000564850 DSTQ03001 7570 aaKnown RBP0.04□□□□□ -2.4
RBFOX1-216ENST00000564850 MUC12Q9UKN1 5478 aa0.03□□□□□ -2.4
RBFOX1-216ENST00000564850 BIRC6Q9NR09 4857 aa0.03□□□□□ -2.4
RBFOX1-216ENST00000564850 MT1BP07438 61 aa0.02□□□□□ -2.41
RBFOX1-216ENST00000564850 RYR3Q15413 4870 aa0.01□□□□□ -2.41
RBFOX1-216ENST00000564850 MT4P47944 62 aa0.01□□□□□ -2.41
RBFOX1-216ENST00000564850 MT1FP04733 61 aa-0.02□□□□□ -2.41
RBFOX1-216ENST00000564850 KRTAP19-2Q3LHN2 52 aa-0.02□□□□□ -2.41
RBFOX1-216ENST00000564850 KRTAP20-2Q3LI61 65 aa-0.02□□□□□ -2.41
RBFOX1-216ENST00000564850 RNF213Q63HN8 5207 aa-0.03□□□□□ -2.41
RBFOX1-216ENST00000564850 EPPK1P58107 5090 aaKnown RBP-0.06□□□□□ -2.42
RBFOX1-216ENST00000564850 HYDINQ4G0P3 5121 aa-0.06□□□□□ -2.42
RBFOX1-216ENST00000564850 CDH23Q9H251 3354 aa-0.08□□□□□ -2.42
RBFOX1-216ENST00000564850 KIAA1109Q2LD37 5005 aa-0.13□□□□□ -2.43
RBFOX1-216ENST00000564850 RYR2Q92736 4967 aa-0.21□□□□□ -2.44
RBFOX1-216ENST00000564850 NEBP20929 6669 aa-0.26□□□□□ -2.45
RBFOX1-216ENST00000564850 ABCA13Q86UQ4 5058 aa-0.29□□□□□ -2.46
RBFOX1-216ENST00000564850 KRTAP20-1Q3LI63 56 aa-0.47□□□□□ -2.48
RBFOX1-216ENST00000564850 KRTAP19-6Q3LI70 58 aa-0.48□□□□□ -2.49
Retrieved 78 of 20,778 RNA–protein pairs in 50.5 ms