RNA–Protein interactions for RNA: ENST00000564850.1

RBFOX1-216, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 293 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-216ENST00000564850 AEBP2Q6ZN18 517 aaPredicted RBP27.14■■□□□ 1.94
RBFOX1-216ENST00000564850 CHIC1Q5VXU3 224 aa25.45■■□□□ 1.66
RBFOX1-216ENST00000564850 SENP3Q9H4L4 574 aaPredicted RBP23.38■■□□□ 1.33
RBFOX1-216ENST00000564850 PHF23Q9BUL5 403 aaPredicted RBP22.91■■□□□ 1.26
RBFOX1-216ENST00000564850 FOXD1Q16676 465 aa21.85■■□□□ 1.09
RBFOX1-216ENST00000564850 POTEDQ86YR6 584 aa21.85■■□□□ 1.09
RBFOX1-216ENST00000564850 MSH5O43196 834 aa20.86■□□□□ 0.93
RBFOX1-216ENST00000564850 PIAS4Q8N2W9 510 aaPredicted RBP20.26■□□□□ 0.83
RBFOX1-216ENST00000564850 PPP6R1Q9UPN7 881 aa19.7■□□□□ 0.74
RBFOX1-216ENST00000564850 ADRA2BP18089 450 aa19.62■□□□□ 0.73
RBFOX1-216ENST00000564850 PLPPR3Q6T4P5 718 aa19.55■□□□□ 0.72
RBFOX1-216ENST00000564850 CACNB1Q02641 598 aaPredicted RBP18.46■□□□□ 0.55
RBFOX1-216ENST00000564850 DMRT2Q9Y5R5 561 aa18.37■□□□□ 0.53
RBFOX1-216ENST00000564850 MAPK8IP2Q13387 824 aaPredicted RBP18.28■□□□□ 0.52
RBFOX1-216ENST00000564850 SCAF1Q9H7N4 1312 aaKnown RBP18.01■□□□□ 0.47
RBFOX1-216ENST00000564850 DCAF8L1A6NGE4 600 aa17.76■□□□□ 0.43
RBFOX1-216ENST00000564850 RNF39Q9H2S5 420 aa17.66■□□□□ 0.42
RBFOX1-216ENST00000564850 C1QBPQ07021 282 aaKnown RBP17.38■□□□□ 0.37
RBFOX1-216ENST00000564850 HOXD11P31277 338 aaPredicted RBP17.31■□□□□ 0.36
RBFOX1-216ENST00000564850 PPP4R3CPQ6ZMV5 832 aa17■□□□□ 0.31
RBFOX1-216ENST00000564850 RNF216Q9NWF9 866 aaPredicted RBP16.97■□□□□ 0.31
RBFOX1-216ENST00000564850 POTEHQ6S545 545 aa16.96■□□□□ 0.31
RBFOX1-216ENST00000564850 CNKSR2Q8WXI2 1034 aa16.9■□□□□ 0.3
RBFOX1-216ENST00000564850 DNAJC5BQ9UF47 199 aa16.89■□□□□ 0.29
RBFOX1-216ENST00000564850 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.58■□□□□ 0.24
RBFOX1-216ENST00000564850 DSG3P32926 999 aa16.24■□□□□ 0.19
RBFOX1-216ENST00000564850 CAPN15O75808 1086 aa16.19■□□□□ 0.18
RBFOX1-216ENST00000564850 NCBP3Q53F19 620 aaKnown RBP16.12■□□□□ 0.17
RBFOX1-216ENST00000564850 SPINK5Q9NQ38 1064 aaPredicted RBP16.11■□□□□ 0.17
RBFOX1-216ENST00000564850 U3KPZ7 1027 aaPredicted RBP16.08■□□□□ 0.16
RBFOX1-216ENST00000564850 NPM3O75607 178 aaKnown RBP15.83■□□□□ 0.12
RBFOX1-216ENST00000564850 ABCB7O75027 752 aa15.71■□□□□ 0.11
RBFOX1-216ENST00000564850 TRHP20396 242 aaPredicted RBP15.71■□□□□ 0.11
RBFOX1-216ENST00000564850 ZNF219Q9P2Y4 722 aaPredicted RBP15.64■□□□□ 0.09
RBFOX1-216ENST00000564850 APLP2Q06481 763 aa15.61■□□□□ 0.09
RBFOX1-216ENST00000564850 RBM42Q9BTD8 480 aaKnown RBP15.59■□□□□ 0.09
RBFOX1-216ENST00000564850 CHRDL2Q6WN34 429 aa15.57■□□□□ 0.08
RBFOX1-216ENST00000564850 SP7Q8TDD2 431 aaPredicted RBP15.48■□□□□ 0.07
RBFOX1-216ENST00000564850 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.37■□□□□ 0.05
RBFOX1-216ENST00000564850 HNRNPUL2Q1KMD3 747 aaKnown RBP15.37■□□□□ 0.05
RBFOX1-216ENST00000564850 SLC4A2P04920 1241 aa15.32■□□□□ 0.04
RBFOX1-216ENST00000564850 SAMD1Q6SPF0 538 aaPredicted RBP15.22■□□□□ 0.03
RBFOX1-216ENST00000564850 POLA2Q14181 598 aa15.04■□□□□ -0
RBFOX1-216ENST00000564850 HAX1O00165 279 aa15.01□□□□□ -0.01
RBFOX1-216ENST00000564850 AKT1S1Q96B36 256 aa15□□□□□ -0.01
RBFOX1-216ENST00000564850 PIP4P2Q8N4L2 257 aa14.99□□□□□ -0.01
RBFOX1-216ENST00000564850 REM2Q8IYK8 340 aaPredicted RBP14.85□□□□□ -0.03
RBFOX1-216ENST00000564850 FXR2P51116 673 aaKnown RBP eCLIP14.74□□□□□ -0.05
RBFOX1-216ENST00000564850 KCNA4P22459 653 aa14.72□□□□□ -0.05
RBFOX1-216ENST00000564850 PITPNM1O00562 1244 aa14.71□□□□□ -0.05
RBFOX1-216ENST00000564850 ZBTB12Q9Y330 459 aaPredicted RBP14.71□□□□□ -0.05
RBFOX1-216ENST00000564850 MYCNP04198 464 aaPredicted RBP14.7□□□□□ -0.06
RBFOX1-216ENST00000564850 EVX2Q03828 476 aa14.66□□□□□ -0.06
RBFOX1-216ENST00000564850 OSCARQ8IYS5 282 aa14.63□□□□□ -0.07
RBFOX1-216ENST00000564850 LHX8Q68G74 356 aa14.52□□□□□ -0.09
RBFOX1-216ENST00000564850 PLSCR2Q9NRY7 297 aa14.41□□□□□ -0.1
RBFOX1-216ENST00000564850 ATF5Q9Y2D1 282 aaPredicted RBP14.37□□□□□ -0.11
RBFOX1-216ENST00000564850 PRKAR2AP13861 404 aaKnown RBP14.34□□□□□ -0.11
RBFOX1-216ENST00000564850 GABBR2O75899 941 aa14.33□□□□□ -0.12
RBFOX1-216ENST00000564850 C19orf67A6NJJ6 358 aa14.3□□□□□ -0.12
RBFOX1-216ENST00000564850 CLEC11AQ9Y240 323 aa14.19□□□□□ -0.14
RBFOX1-216ENST00000564850 SPDYE2BA6NHP3 402 aa14.15□□□□□ -0.14
RBFOX1-216ENST00000564850 SPDYE6P0CI01 402 aa14.15□□□□□ -0.14
RBFOX1-216ENST00000564850 SPDYE2Q495Y8 402 aa14.15□□□□□ -0.14
RBFOX1-216ENST00000564850 SPDYE1Q8NFV5 336 aaPredicted RBP14.15□□□□□ -0.14
RBFOX1-216ENST00000564850 FOXD4L1Q9NU39 408 aa14.06□□□□□ -0.16
RBFOX1-216ENST00000564850 POTEIP0CG38 1075 aa13.98□□□□□ -0.17
RBFOX1-216ENST00000564850 FBLN2P98095 1184 aa13.98□□□□□ -0.17
RBFOX1-216ENST00000564850 CHADLQ6NUI6 762 aa13.97□□□□□ -0.17
RBFOX1-216ENST00000564850 ZNF692Q9BU19 519 aaPredicted RBP13.85□□□□□ -0.19
RBFOX1-216ENST00000564850 CD44P16070 742 aaKnown RBP13.84□□□□□ -0.19
RBFOX1-216ENST00000564850 SSUH2Q9Y2M2 353 aa13.83□□□□□ -0.2
RBFOX1-216ENST00000564850 PRR29P0C7W0 189 aa13.81□□□□□ -0.2
RBFOX1-216ENST00000564850 CLCN6P51797 869 aa13.81□□□□□ -0.2
RBFOX1-216ENST00000564850 DCBLD2Q96PD2 775 aa13.81□□□□□ -0.2
RBFOX1-216ENST00000564850 SLC4A1APQ9BWU0 796 aaKnown RBP13.76□□□□□ -0.21
RBFOX1-216ENST00000564850 POTEMA6NI47 508 aa13.73□□□□□ -0.21
RBFOX1-216ENST00000564850 ATXN8OSP0DMR3 200 aa13.69□□□□□ -0.22
RBFOX1-216ENST00000564850 FARP1Q9Y4F1 1045 aaPredicted RBP13.67□□□□□ -0.22
RBFOX1-216ENST00000564850 MKRN4PQ13434 485 aaPredicted RBP13.66□□□□□ -0.22
RBFOX1-216ENST00000564850 POTEGQ6S5H5 508 aa13.66□□□□□ -0.22
RBFOX1-216ENST00000564850 OTUD5Q96G74 571 aa13.65□□□□□ -0.22
RBFOX1-216ENST00000564850 PABPN1Q86U42 306 aaKnown RBP eCLIP13.61□□□□□ -0.23
RBFOX1-216ENST00000564850 ZNF579Q8NAF0 562 aaKnown RBP13.55□□□□□ -0.24
RBFOX1-216ENST00000564850 PCDH10Q9P2E7 1040 aa13.54□□□□□ -0.24
RBFOX1-216ENST00000564850 ZRANB1Q9UGI0 708 aa13.51□□□□□ -0.25
RBFOX1-216ENST00000564850 POTEB2H3BUK9 544 aa13.49□□□□□ -0.25
RBFOX1-216ENST00000564850 ZBTB22O15209 634 aa13.48□□□□□ -0.25
RBFOX1-216ENST00000564850 GALR2O43603 387 aaPredicted RBP13.46□□□□□ -0.25
RBFOX1-216ENST00000564850 PAK3O75914 559 aaPredicted RBP13.26□□□□□ -0.29
RBFOX1-216ENST00000564850 PELP1Q8IZL8 1130 aaKnown RBP13.24□□□□□ -0.29
RBFOX1-216ENST00000564850 PHF12Q96QT6 1004 aa13.23□□□□□ -0.29
RBFOX1-216ENST00000564850 MAMSTRQ6ZN01 415 aa13.22□□□□□ -0.29
RBFOX1-216ENST00000564850 METRNQ9UJH8 293 aa13.22□□□□□ -0.29
RBFOX1-216ENST00000564850 FAM163AQ96GL9 167 aaPredicted RBP13.2□□□□□ -0.3
RBFOX1-216ENST00000564850 CREBZFQ9NS37 354 aa13.2□□□□□ -0.3
RBFOX1-216ENST00000564850 LCE2DQ5TA82 110 aaPredicted RBP13.19□□□□□ -0.3
RBFOX1-216ENST00000564850 SLC39A7Q92504 469 aa13.15□□□□□ -0.3
RBFOX1-216ENST00000564850 POTEJP0CG39 1038 aa13.14□□□□□ -0.31
RBFOX1-216ENST00000564850 C7P10643 843 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms