RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 KRTAP2-1Q9BYU5 128 aa7.03□□□□□ -1.28
MAP1LC3B-206ENST00000564844 LOC100996750A0A140TA64 210 aa6.93□□□□□ -1.3
MAP1LC3B-206ENST00000564844 SYNE1Q8NF91 8797 aaKnown RBP6.91□□□□□ -1.3
MAP1LC3B-206ENST00000564844 KRTAP4-3Q9BYR4 195 aa6.91□□□□□ -1.3
MAP1LC3B-206ENST00000564844 OBSCNQ5VST9 7968 aa6.9□□□□□ -1.3
MAP1LC3B-206ENST00000564844 MT1LQ93083 61 aa6.9□□□□□ -1.31
MAP1LC3B-206ENST00000564844 MT1EP04732 61 aa6.82□□□□□ -1.32
MAP1LC3B-206ENST00000564844 MT1GP13640 62 aa6.75□□□□□ -1.33
MAP1LC3B-206ENST00000564844 KRTAP12-4P60329 112 aa6.61□□□□□ -1.35
MAP1LC3B-206ENST00000564844 SYNE2Q8WXH0 6885 aaKnown RBP6.53□□□□□ -1.36
MAP1LC3B-206ENST00000564844 KRTAP4-9Q9BYQ8 210 aa6.45□□□□□ -1.38
MAP1LC3B-206ENST00000564844 LCE2DQ5TA82 110 aaPredicted RBP6.45□□□□□ -1.38
MAP1LC3B-206ENST00000564844 MACF1Q9UPN3 7388 aaKnown RBP6.45□□□□□ -1.38
MAP1LC3B-206ENST00000564844 KRTAP19-6Q3LI70 58 aa6.44□□□□□ -1.38
MAP1LC3B-206ENST00000564844 LCE3BQ5TA77 95 aa6.39□□□□□ -1.39
MAP1LC3B-206ENST00000564844 MT1MQ8N339 61 aa6.37□□□□□ -1.39
MAP1LC3B-206ENST00000564844 KRTAP19-4Q3LI73 84 aa6.34□□□□□ -1.4
MAP1LC3B-206ENST00000564844 SPRR2FQ96RM1 72 aa6.31□□□□□ -1.4
MAP1LC3B-206ENST00000564844 KRTAP19-3Q7Z4W3 81 aa6.28□□□□□ -1.4
MAP1LC3B-206ENST00000564844 MDN1Q9NU22 5596 aa6.26□□□□□ -1.41
MAP1LC3B-206ENST00000564844 KRTAP9-2Q9BYQ4 174 aa6.11□□□□□ -1.43
MAP1LC3B-206ENST00000564844 KRTAP9-7A8MTY7 169 aa6.03□□□□□ -1.44
MAP1LC3B-206ENST00000564844 KRTAP6-1Q3LI64 71 aa5.99□□□□□ -1.45
MAP1LC3B-206ENST00000564844 LCE5AQ5TCM9 118 aa5.96□□□□□ -1.45
MAP1LC3B-206ENST00000564844 LCE3DQ9BYE3 92 aa5.93□□□□□ -1.46
MAP1LC3B-206ENST00000564844 PRM1P04553 51 aa5.92□□□□□ -1.46
MAP1LC3B-206ENST00000564844 LCE1AQ5T7P2 110 aa5.86□□□□□ -1.47
MAP1LC3B-206ENST00000564844 KRTAP2-2Q9BYT5 123 aa5.85□□□□□ -1.47
MAP1LC3B-206ENST00000564844 KRTAP6-3Q3LI67 103 aa5.83□□□□□ -1.48
MAP1LC3B-206ENST00000564844 LCE3EQ5T5B0 92 aa5.83□□□□□ -1.48
MAP1LC3B-206ENST00000564844 KRTAP5-5Q701N2 237 aaPredicted RBP5.8□□□□□ -1.48
MAP1LC3B-206ENST00000564844 MT1AP04731 61 aa5.73□□□□□ -1.49
MAP1LC3B-206ENST00000564844 SPRR2EP22531 72 aa5.68□□□□□ -1.5
MAP1LC3B-206ENST00000564844 SPRR2BP35325 72 aa5.68□□□□□ -1.5
MAP1LC3B-206ENST00000564844 SPRR2AP35326 72 aa5.68□□□□□ -1.5
MAP1LC3B-206ENST00000564844 KRTAP9-6A0A140TA67 174 aa5.68□□□□□ -1.5
MAP1LC3B-206ENST00000564844 LCE1EQ5T753 118 aa5.66□□□□□ -1.5
MAP1LC3B-206ENST00000564844 KRTAP6-2Q3LI66 62 aa5.58□□□□□ -1.52
MAP1LC3B-206ENST00000564844 KRTAP5-9P26371 169 aa5.47□□□□□ -1.53
MAP1LC3B-206ENST00000564844 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.42□□□□□ -1.54
MAP1LC3B-206ENST00000564844 SPRR2DP22532 72 aa5.41□□□□□ -1.54
MAP1LC3B-206ENST00000564844 LCE1DQ5T752 114 aa5.38□□□□□ -1.55
MAP1LC3B-206ENST00000564844 KRTAP9-4Q9BYQ2 154 aa5.32□□□□□ -1.56
MAP1LC3B-206ENST00000564844 MT3P25713 68 aa5.11□□□□□ -1.59
MAP1LC3B-206ENST00000564844 NEBP20929 6669 aa5.02□□□□□ -1.61
MAP1LC3B-206ENST00000564844 MT4P47944 62 aa4.99□□□□□ -1.61
MAP1LC3B-206ENST00000564844 LCE1FQ5T754 118 aa4.96□□□□□ -1.62
MAP1LC3B-206ENST00000564844 KRTAP4-6Q9BYQ5 205 aa4.89□□□□□ -1.63
MAP1LC3B-206ENST00000564844 HMCN1Q96RW7 5635 aa4.73□□□□□ -1.65
MAP1LC3B-206ENST00000564844 MUC5ACP98088 5654 aa4.63□□□□□ -1.67
MAP1LC3B-206ENST00000564844 KRTAP5-4Q6L8H1 288 aa4.62□□□□□ -1.67
MAP1LC3B-206ENST00000564844 MUC19Q7Z5P9 8384 aa4.62□□□□□ -1.67
MAP1LC3B-206ENST00000564844 LCE1BQ5T7P3 118 aa4.57□□□□□ -1.68
MAP1LC3B-206ENST00000564844 KRTAP4-11Q9BYQ6 195 aa4.55□□□□□ -1.68
MAP1LC3B-206ENST00000564844 KRTAP20-2Q3LI61 65 aa4.54□□□□□ -1.68
MAP1LC3B-206ENST00000564844 LCE4AQ5TA78 99 aa4.4□□□□□ -1.71
MAP1LC3B-206ENST00000564844 KRTAP20-1Q3LI63 56 aa4.37□□□□□ -1.71
MAP1LC3B-206ENST00000564844 KRTAP5-2Q701N4 177 aa4.25□□□□□ -1.73
MAP1LC3B-206ENST00000564844 KRTAP5-3Q6L8H2 238 aa4.23□□□□□ -1.73
MAP1LC3B-206ENST00000564844 KRTAP5-10Q6L8G5 202 aa4.19□□□□□ -1.74
MAP1LC3B-206ENST00000564844 KRTAP4-4Q9BYR3 166 aa3.95□□□□□ -1.78
MAP1LC3B-206ENST00000564844 KRTAP5-1Q6L8H4 278 aa3.92□□□□□ -1.78
MAP1LC3B-206ENST00000564844 KRTAP4-2Q9BYR5 136 aa3.86□□□□□ -1.79
MAP1LC3B-206ENST00000564844 AHNAK2Q8IVF2 5795 aa3.82□□□□□ -1.8
MAP1LC3B-206ENST00000564844 MUC5BQ9HC84 5762 aaPredicted RBP3.78□□□□□ -1.8
MAP1LC3B-206ENST00000564844 LCE1CQ5T751 118 aa3.75□□□□□ -1.81
MAP1LC3B-206ENST00000564844 KRTAP21-2Q3LI59 83 aa3.73□□□□□ -1.81
MAP1LC3B-206ENST00000564844 KRTAP5-8O75690 187 aa3.64□□□□□ -1.83
MAP1LC3B-206ENST00000564844 KRTAP4-12Q9BQ66 201 aa3.62□□□□□ -1.83
MAP1LC3B-206ENST00000564844 KRTAP21-1Q3LI58 79 aa3.51□□□□□ -1.85
MAP1LC3B-206ENST00000564844 KRTAP9-9Q9BYP9 154 aa3.47□□□□□ -1.85
MAP1LC3B-206ENST00000564844 GPR98Q8WXG9 6306 aa3.43□□□□□ -1.86
MAP1LC3B-206ENST00000564844 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.39□□□□□ -1.87
MAP1LC3B-206ENST00000564844 KRTAP5-7Q6L8G8 165 aa3.24□□□□□ -1.89
MAP1LC3B-206ENST00000564844 KRTAP5-11Q6L8G4 156 aa3.14□□□□□ -1.91
MAP1LC3B-206ENST00000564844 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
MAP1LC3B-206ENST00000564844 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
MAP1LC3B-206ENST00000564844 MUC16Q8WXI7 14507 aa1.99□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms