RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 RPL37P61927 97 aaKnown RBP1.71□□□□□ -2.14
CHD9-212ENST00000564641 UBR4Q5T4S7 5183 aa1.7□□□□□ -2.14
CHD9-212ENST00000564641 COX6B2Q6YFQ2 88 aa1.69□□□□□ -2.14
CHD9-212ENST00000564641 LRP2P98164 4655 aa1.69□□□□□ -2.14
CHD9-212ENST00000564641 HMCN2Q8NDA2 5059 aa1.69□□□□□ -2.14
CHD9-212ENST00000564641 RPS29P62273 56 aaKnown RBP1.68□□□□□ -2.14
CHD9-212ENST00000564641 C10orf95Q9H7T3 257 aa1.68□□□□□ -2.14
CHD9-212ENST00000564641 LPAP08519 4548 aa1.67□□□□□ -2.14
CHD9-212ENST00000564641 RNF213Q63HN8 5207 aa1.67□□□□□ -2.14
CHD9-212ENST00000564641 A0A0D9SG42 100 aa1.65□□□□□ -2.15
CHD9-212ENST00000564641 PLAC4Q8WY50 150 aa1.63□□□□□ -2.15
CHD9-212ENST00000564641 PRO2289Q9P1D8 64 aa1.63□□□□□ -2.15
CHD9-212ENST00000564641 S4R3F8 94 aa1.63□□□□□ -2.15
CHD9-212ENST00000564641 MUC17Q685J3 4493 aa1.62□□□□□ -2.15
CHD9-212ENST00000564641 MUC2Q02817 5179 aa1.62□□□□□ -2.15
CHD9-212ENST00000564641 KRTAP13-4Q3LI77 160 aa1.61□□□□□ -2.15
CHD9-212ENST00000564641 FCGBPQ9Y6R7 5405 aaPredicted RBP1.6□□□□□ -2.15
CHD9-212ENST00000564641 M0R2T5 61 aa1.6□□□□□ -2.15
CHD9-212ENST00000564641 KRTAP12-1P59990 96 aa1.56□□□□□ -2.16
CHD9-212ENST00000564641 C9orf92A6NGG3 77 aa1.55□□□□□ -2.16
CHD9-212ENST00000564641 FAT4Q6V0I7 4981 aa1.54□□□□□ -2.16
CHD9-212ENST00000564641 M0QZ58 72 aa1.53□□□□□ -2.16
CHD9-212ENST00000564641 MT1HP80294 61 aa1.51□□□□□ -2.17
CHD9-212ENST00000564641 FSIP2Q5CZC0 6907 aa1.51□□□□□ -2.17
CHD9-212ENST00000564641 INE1O15225 51 aa1.5□□□□□ -2.17
CHD9-212ENST00000564641 FLGP20930 4061 aaPredicted RBP1.47□□□□□ -2.17
CHD9-212ENST00000564641 KRTAP19-2Q3LHN2 52 aa1.46□□□□□ -2.18
CHD9-212ENST00000564641 HMCN1Q96RW7 5635 aa1.41□□□□□ -2.18
CHD9-212ENST00000564641 MT2AP02795 61 aa1.39□□□□□ -2.19
CHD9-212ENST00000564641 TNP1P09430 55 aa1.39□□□□□ -2.19
CHD9-212ENST00000564641 KRTAP19-6Q3LI70 58 aa1.37□□□□□ -2.19
CHD9-212ENST00000564641 USH2AO75445 5202 aa1.37□□□□□ -2.19
CHD9-212ENST00000564641 MT1FP04733 61 aa1.36□□□□□ -2.19
CHD9-212ENST00000564641 SSPOA2VEC9 5147 aa1.34□□□□□ -2.19
CHD9-212ENST00000564641 MACF1Q9UPN3 7388 aaKnown RBP1.3□□□□□ -2.2
CHD9-212ENST00000564641 KRTAP20-1Q3LI63 56 aa1.3□□□□□ -2.2
CHD9-212ENST00000564641 SYNE2Q8WXH0 6885 aaKnown RBP1.29□□□□□ -2.2
CHD9-212ENST00000564641 SPRR2GQ9BYE4 73 aa1.28□□□□□ -2.2
CHD9-212ENST00000564641 KRTAP19-8Q3LI54 63 aa1.26□□□□□ -2.21
CHD9-212ENST00000564641 KRTAP2-3P0C7H8 128 aa1.25□□□□□ -2.21
CHD9-212ENST00000564641 KRTAP2-4Q9BYR9 128 aa1.25□□□□□ -2.21
CHD9-212ENST00000564641 KMT2DO14686 5537 aa1.25□□□□□ -2.21
CHD9-212ENST00000564641 MT1BP07438 61 aa1.23□□□□□ -2.21
CHD9-212ENST00000564641 KRTAP8-1Q8IUC2 63 aa1.23□□□□□ -2.21
CHD9-212ENST00000564641 SPRR2FQ96RM1 72 aa1.23□□□□□ -2.21
CHD9-212ENST00000564641 SPRR2EP22531 72 aa1.22□□□□□ -2.21
CHD9-212ENST00000564641 SPRR2BP35325 72 aa1.22□□□□□ -2.21
CHD9-212ENST00000564641 SPRR2AP35326 72 aa1.22□□□□□ -2.21
CHD9-212ENST00000564641 KRTAP2-1Q9BYU5 128 aa1.21□□□□□ -2.22
CHD9-212ENST00000564641 MUC12Q9UKN1 5478 aa1.2□□□□□ -2.22
CHD9-212ENST00000564641 SPRR2DP22532 72 aa1.19□□□□□ -2.22
CHD9-212ENST00000564641 MDN1Q9NU22 5596 aa1.18□□□□□ -2.22
CHD9-212ENST00000564641 NEBP20929 6669 aa1.18□□□□□ -2.22
CHD9-212ENST00000564641 MT1XP80297 61 aa1.15□□□□□ -2.23
CHD9-212ENST00000564641 KRTAP5-10Q6L8G5 202 aa1.12□□□□□ -2.23
CHD9-212ENST00000564641 MT1GP13640 62 aa1.07□□□□□ -2.24
CHD9-212ENST00000564641 KRTAP19-3Q7Z4W3 81 aa1.07□□□□□ -2.24
CHD9-212ENST00000564641 DSTQ03001 7570 aaKnown RBP1.07□□□□□ -2.24
CHD9-212ENST00000564641 KRTAP19-5Q3LI72 72 aa1.06□□□□□ -2.24
CHD9-212ENST00000564641 MT1EP04732 61 aa1.04□□□□□ -2.24
CHD9-212ENST00000564641 MT4P47944 62 aa1.01□□□□□ -2.25
CHD9-212ENST00000564641 KRTAP19-7Q3SYF9 63 aa1.01□□□□□ -2.25
CHD9-212ENST00000564641 MT1MQ8N339 61 aa0.99□□□□□ -2.25
CHD9-212ENST00000564641 MT1LQ93083 61 aa0.98□□□□□ -2.25
CHD9-212ENST00000564641 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
CHD9-212ENST00000564641 GPR98Q8WXG9 6306 aa0.98□□□□□ -2.25
CHD9-212ENST00000564641 PRM1P04553 51 aa0.96□□□□□ -2.26
CHD9-212ENST00000564641 MT1AP04731 61 aa0.93□□□□□ -2.26
CHD9-212ENST00000564641 KRTAP20-2Q3LI61 65 aa0.93□□□□□ -2.26
CHD9-212ENST00000564641 SYNE1Q8NF91 8797 aaKnown RBP0.9□□□□□ -2.27
CHD9-212ENST00000564641 AHNAK2Q8IVF2 5795 aa0.89□□□□□ -2.27
CHD9-212ENST00000564641 KRTAP6-2Q3LI66 62 aa0.85□□□□□ -2.27
CHD9-212ENST00000564641 KRTAP6-1Q3LI64 71 aa0.82□□□□□ -2.28
CHD9-212ENST00000564641 MUC5BQ9HC84 5762 aaPredicted RBP0.79□□□□□ -2.28
CHD9-212ENST00000564641 MUC5ACP98088 5654 aa0.78□□□□□ -2.28
CHD9-212ENST00000564641 AHNAKQ09666 5890 aaKnown RBP0.76□□□□□ -2.29
CHD9-212ENST00000564641 KRTAP21-1Q3LI58 79 aa0.62□□□□□ -2.31
CHD9-212ENST00000564641 PHGR1C9JFL3 82 aa0.61□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 35.8 ms