RNA–Protein interactions for RNA: ENST00000564594.1

HMGN2P46-206, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 46, humanhuman

TSL 4

Gene HMGN2P46, Length 572 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P46-206ENST00000564594 KRTAP4-3Q9BYR4 195 aa3.67□□□□□ -1.82
HMGN2P46-206ENST00000564594 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
HMGN2P46-206ENST00000564594 SMIM20Q8N5G0 67 aa3.59□□□□□ -1.83
HMGN2P46-206ENST00000564594 SPANXA2-OT1Q8N9U9 137 aa3.58□□□□□ -1.84
HMGN2P46-206ENST00000564594 J3QR89 54 aa3.57□□□□□ -1.84
HMGN2P46-206ENST00000564594 KRTAP12-1P59990 96 aa3.57□□□□□ -1.84
HMGN2P46-206ENST00000564594 SPINT4Q6UDR6 99 aa3.57□□□□□ -1.84
HMGN2P46-206ENST00000564594 C10orf95Q9H7T3 257 aa3.57□□□□□ -1.84
HMGN2P46-206ENST00000564594 SNURFQ9Y675 71 aa3.57□□□□□ -1.84
HMGN2P46-206ENST00000564594 SPATA8Q6RVD6 105 aa3.56□□□□□ -1.84
HMGN2P46-206ENST00000564594 KRTAP20-2Q3LI61 65 aa3.55□□□□□ -1.84
HMGN2P46-206ENST00000564594 KRTAP5-11Q6L8G4 156 aa3.55□□□□□ -1.84
HMGN2P46-206ENST00000564594 LCE3AQ5TA76 89 aa3.54□□□□□ -1.84
HMGN2P46-206ENST00000564594 A0A1B0GV90 55 aa3.53□□□□□ -1.84
HMGN2P46-206ENST00000564594 SPRR5A0A1B0GTR4 108 aa3.5□□□□□ -1.85
HMGN2P46-206ENST00000564594 SYNE1Q8NF91 8797 aaKnown RBP3.5□□□□□ -1.85
HMGN2P46-206ENST00000564594 A0A1B0GU33 70 aa3.49□□□□□ -1.85
HMGN2P46-206ENST00000564594 SEC61GP60059 68 aa3.49□□□□□ -1.85
HMGN2P46-206ENST00000564594 KRTAP5-5Q701N2 237 aaPredicted RBP3.49□□□□□ -1.85
HMGN2P46-206ENST00000564594 SERP1Q9Y6X1 66 aa3.49□□□□□ -1.85
HMGN2P46-206ENST00000564594 COA5Q86WW8 74 aa3.48□□□□□ -1.85
HMGN2P46-206ENST00000564594 TNP1P09430 55 aa3.45□□□□□ -1.86
HMGN2P46-206ENST00000564594 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.43□□□□□ -1.86
HMGN2P46-206ENST00000564594 KRTAP12-4P60329 112 aa3.42□□□□□ -1.86
HMGN2P46-206ENST00000564594 KRTAP12-3P60328 96 aa3.41□□□□□ -1.86
HMGN2P46-206ENST00000564594 SMIM26A0A096LP01 95 aa3.39□□□□□ -1.87
HMGN2P46-206ENST00000564594 LCE3CQ5T5A8 94 aa3.39□□□□□ -1.87
HMGN2P46-206ENST00000564594 A8MU10 97 aa3.38□□□□□ -1.87
HMGN2P46-206ENST00000564594 SERP2Q8N6R1 65 aa3.38□□□□□ -1.87
HMGN2P46-206ENST00000564594 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
HMGN2P46-206ENST00000564594 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
HMGN2P46-206ENST00000564594 K7ERU9 68 aa3.31□□□□□ -1.88
HMGN2P46-206ENST00000564594 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
HMGN2P46-206ENST00000564594 A0A1B0GU69 56 aa3.29□□□□□ -1.88
HMGN2P46-206ENST00000564594 MUC5ACP98088 5654 aa3.28□□□□□ -1.88
HMGN2P46-206ENST00000564594 KRTAP5-2Q701N4 177 aa3.26□□□□□ -1.89
HMGN2P46-206ENST00000564594 H7BZZ5 65 aa3.24□□□□□ -1.89
HMGN2P46-206ENST00000564594 KRTAP5-8O75690 187 aa3.21□□□□□ -1.9
HMGN2P46-206ENST00000564594 COX7CP15954 63 aa3.2□□□□□ -1.9
HMGN2P46-206ENST00000564594 MT1AP04731 61 aa3.15□□□□□ -1.91
HMGN2P46-206ENST00000564594 KRTAP6-1Q3LI64 71 aa3.15□□□□□ -1.91
HMGN2P46-206ENST00000564594 KRTAP25-1Q3LHN0 102 aa3.13□□□□□ -1.91
HMGN2P46-206ENST00000564594 OBSCNQ5VST9 7968 aa3.11□□□□□ -1.91
HMGN2P46-206ENST00000564594 PRR15LQ9BU68 103 aa3.1□□□□□ -1.91
HMGN2P46-206ENST00000564594 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
HMGN2P46-206ENST00000564594 KRTAP6-2Q3LI66 62 aa3.05□□□□□ -1.92
HMGN2P46-206ENST00000564594 LINC01558Q9Y6Z2 57 aa3.05□□□□□ -1.92
HMGN2P46-206ENST00000564594 UQCR11O14957 56 aa3.01□□□□□ -1.93
HMGN2P46-206ENST00000564594 KRTAP5-1Q6L8H4 278 aa2.99□□□□□ -1.93
HMGN2P46-206ENST00000564594 ATP5EP56381 51 aaPredicted RBP2.93□□□□□ -1.94
HMGN2P46-206ENST00000564594 MIR22HGQ0VDD5 57 aa2.92□□□□□ -1.94
HMGN2P46-206ENST00000564594 ANAPC13Q9BS18 74 aa2.9□□□□□ -1.95
HMGN2P46-206ENST00000564594 CCDC179H3BU77 68 aa2.88□□□□□ -1.95
HMGN2P46-206ENST00000564594 K7ERS5 55 aa2.88□□□□□ -1.95
HMGN2P46-206ENST00000564594 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
HMGN2P46-206ENST00000564594 TMEM258P61165 79 aa2.74□□□□□ -1.97
HMGN2P46-206ENST00000564594 RPS28P62857 69 aaKnown RBP2.74□□□□□ -1.97
HMGN2P46-206ENST00000564594 Q1T7F1 81 aa2.71□□□□□ -1.98
HMGN2P46-206ENST00000564594 CDC42SE1Q9NRR8 79 aa2.71□□□□□ -1.98
HMGN2P46-206ENST00000564594 PSPHP1O15172 72 aa2.7□□□□□ -1.98
HMGN2P46-206ENST00000564594 ROMO1P60602 79 aa2.66□□□□□ -1.98
HMGN2P46-206ENST00000564594 V9GYY9 64 aa2.65□□□□□ -1.99
HMGN2P46-206ENST00000564594 A6NED7 52 aa2.57□□□□□ -2
HMGN2P46-206ENST00000564594 LCE1BQ5T7P3 118 aa2.56□□□□□ -2
HMGN2P46-206ENST00000564594 LCE3DQ9BYE3 92 aa2.54□□□□□ -2
HMGN2P46-206ENST00000564594 LCE1CQ5T751 118 aa2.53□□□□□ -2
HMGN2P46-206ENST00000564594 BRK1Q8WUW1 75 aa2.24□□□□□ -2.05
HMGN2P46-206ENST00000564594 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
HMGN2P46-206ENST00000564594 PMAIP1Q13794 54 aa2.15□□□□□ -2.07
HMGN2P46-206ENST00000564594 PRO0628Q9UI54 55 aa2.15□□□□□ -2.07
HMGN2P46-206ENST00000564594 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
HMGN2P46-206ENST00000564594 KTN1-AS1Q86SY8 53 aa2□□□□□ -2.09
HMGN2P46-206ENST00000564594 LUZP6Q538Z0 58 aa1.97□□□□□ -2.09
HMGN2P46-206ENST00000564594 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
HMGN2P46-206ENST00000564594 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
HMGN2P46-206ENST00000564594 INE1O15225 51 aa1.4□□□□□ -2.19
HMGN2P46-206ENST00000564594 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
HMGN2P46-206ENST00000564594 PRM1P04553 51 aa1.34□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 37.7 ms