RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 MT1LQ93083 61 aa7.07□□□□□ -1.28
CMTM3-207ENST00000564060 PSPHP1O15172 72 aa7.05□□□□□ -1.28
CMTM3-207ENST00000564060 DSTQ03001 7570 aaKnown RBP7.04□□□□□ -1.28
CMTM3-207ENST00000564060 MT1MQ8N339 61 aa7.02□□□□□ -1.29
CMTM3-207ENST00000564060 KRTAP25-1Q3LHN0 102 aa6.98□□□□□ -1.29
CMTM3-207ENST00000564060 RPS28P62857 69 aaKnown RBP6.97□□□□□ -1.29
CMTM3-207ENST00000564060 KRTAP12-3P60328 96 aa6.94□□□□□ -1.3
CMTM3-207ENST00000564060 A6NED7 52 aa6.87□□□□□ -1.31
CMTM3-207ENST00000564060 KRTAP4-9Q9BYQ8 210 aa6.81□□□□□ -1.32
CMTM3-207ENST00000564060 LCE4AQ5TA78 99 aa6.79□□□□□ -1.32
CMTM3-207ENST00000564060 KRTAP4-3Q9BYR4 195 aa6.78□□□□□ -1.32
CMTM3-207ENST00000564060 KRTAP23-1A1A580 65 aa6.74□□□□□ -1.33
CMTM3-207ENST00000564060 LCE1DQ5T752 114 aa6.7□□□□□ -1.34
CMTM3-207ENST00000564060 CDC42SE1Q9NRR8 79 aa6.69□□□□□ -1.34
CMTM3-207ENST00000564060 KRTAP4-7Q9BYR0 210 aa6.66□□□□□ -1.34
CMTM3-207ENST00000564060 KRTAP19-4Q3LI73 84 aa6.65□□□□□ -1.34
CMTM3-207ENST00000564060 MT4P47944 62 aa6.64□□□□□ -1.35
CMTM3-207ENST00000564060 KRTAP5-4Q6L8H1 288 aa6.63□□□□□ -1.35
CMTM3-207ENST00000564060 ROMO1P60602 79 aa6.56□□□□□ -1.36
CMTM3-207ENST00000564060 KRTAP15-1Q3LI76 137 aa6.53□□□□□ -1.36
CMTM3-207ENST00000564060 HMCN1Q96RW7 5635 aa6.48□□□□□ -1.37
CMTM3-207ENST00000564060 KRTAP4-6Q9BYQ5 205 aa6.43□□□□□ -1.38
CMTM3-207ENST00000564060 KRTAP5-5Q701N2 237 aaPredicted RBP6.42□□□□□ -1.38
CMTM3-207ENST00000564060 GPR98Q8WXG9 6306 aa6.4□□□□□ -1.39
CMTM3-207ENST00000564060 LCE3CQ5T5A8 94 aa6.39□□□□□ -1.39
CMTM3-207ENST00000564060 LOC100996750A0A140TA64 210 aa6.32□□□□□ -1.4
CMTM3-207ENST00000564060 KRTAP12-4P60329 112 aa6.29□□□□□ -1.4
CMTM3-207ENST00000564060 SPRR5A0A1B0GTR4 108 aa6.27□□□□□ -1.41
CMTM3-207ENST00000564060 BRK1Q8WUW1 75 aa6.26□□□□□ -1.41
CMTM3-207ENST00000564060 KRTAP20-2Q3LI61 65 aa6.25□□□□□ -1.41
CMTM3-207ENST00000564060 PRO0628Q9UI54 55 aa6.22□□□□□ -1.41
CMTM3-207ENST00000564060 AHNAK2Q8IVF2 5795 aa6.19□□□□□ -1.42
CMTM3-207ENST00000564060 KRTAP5-10Q6L8G5 202 aa6.17□□□□□ -1.42
CMTM3-207ENST00000564060 SYNE1Q8NF91 8797 aaKnown RBP6.07□□□□□ -1.44
CMTM3-207ENST00000564060 KRTAP5-3Q6L8H2 238 aa6.07□□□□□ -1.44
CMTM3-207ENST00000564060 MT1AP04731 61 aa6.04□□□□□ -1.44
CMTM3-207ENST00000564060 SVIPQ8NHG7 77 aa5.98□□□□□ -1.45
CMTM3-207ENST00000564060 KRTAP6-1Q3LI64 71 aa5.96□□□□□ -1.46
CMTM3-207ENST00000564060 KRTAP9-6A8MVA2 160 aa5.95□□□□□ -1.46
CMTM3-207ENST00000564060 PMAIP1Q13794 54 aa5.93□□□□□ -1.46
CMTM3-207ENST00000564060 KRTAP5-7Q6L8G8 165 aa5.93□□□□□ -1.46
CMTM3-207ENST00000564060 KRTAP5-2Q701N4 177 aa5.83□□□□□ -1.48
CMTM3-207ENST00000564060 KRTAP9-4Q9BYQ2 154 aa5.81□□□□□ -1.48
CMTM3-207ENST00000564060 KTN1-AS1Q86SY8 53 aa5.74□□□□□ -1.49
CMTM3-207ENST00000564060 KRTAP4-11Q9BYQ6 195 aa5.69□□□□□ -1.5
CMTM3-207ENST00000564060 KRTAP6-2Q3LI66 62 aa5.68□□□□□ -1.5
CMTM3-207ENST00000564060 MT3P25713 68 aa5.54□□□□□ -1.52
CMTM3-207ENST00000564060 PRAC1Q96KF2 57 aa5.53□□□□□ -1.52
CMTM3-207ENST00000564060 H3BS24 57 aa5.48□□□□□ -1.53
CMTM3-207ENST00000564060 KRTAP5-8O75690 187 aa5.48□□□□□ -1.53
CMTM3-207ENST00000564060 OBSCNQ5VST9 7968 aa5.33□□□□□ -1.56
CMTM3-207ENST00000564060 KRTAP9-9Q9BYP9 154 aa5.22□□□□□ -1.57
CMTM3-207ENST00000564060 KRTAP5-1Q6L8H4 278 aa5.19□□□□□ -1.58
CMTM3-207ENST00000564060 LCE1EQ5T753 118 aa5.07□□□□□ -1.6
CMTM3-207ENST00000564060 MUC5BQ9HC84 5762 aaPredicted RBP5.05□□□□□ -1.6
CMTM3-207ENST00000564060 MUC5ACP98088 5654 aa5.05□□□□□ -1.6
CMTM3-207ENST00000564060 KRTAP4-12Q9BQ66 201 aa5.01□□□□□ -1.61
CMTM3-207ENST00000564060 AHNAKQ09666 5890 aaKnown RBP4.99□□□□□ -1.61
CMTM3-207ENST00000564060 KRTAP4-2Q9BYR5 136 aa4.73□□□□□ -1.65
CMTM3-207ENST00000564060 LCE1BQ5T7P3 118 aa4.72□□□□□ -1.65
CMTM3-207ENST00000564060 LCE1CQ5T751 118 aa4.69□□□□□ -1.66
CMTM3-207ENST00000564060 LUZP6Q538Z0 58 aa4.64□□□□□ -1.67
CMTM3-207ENST00000564060 LCE3DQ9BYE3 92 aa4.64□□□□□ -1.67
CMTM3-207ENST00000564060 NDUFAF8A1L188 74 aa4.46□□□□□ -1.7
CMTM3-207ENST00000564060 LCE3EQ5T5B0 92 aa4.39□□□□□ -1.71
CMTM3-207ENST00000564060 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.29□□□□□ -1.72
CMTM3-207ENST00000564060 KRTAP5-11Q6L8G4 156 aa4.25□□□□□ -1.73
CMTM3-207ENST00000564060 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
CMTM3-207ENST00000564060 A0A0A0MQY5 61 aa3.96□□□□□ -1.78
CMTM3-207ENST00000564060 KRTAP21-2Q3LI59 83 aa3.92□□□□□ -1.78
CMTM3-207ENST00000564060 INE1O15225 51 aa3.72□□□□□ -1.81
CMTM3-207ENST00000564060 PHGR1C9JFL3 82 aa3.65□□□□□ -1.83
CMTM3-207ENST00000564060 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
CMTM3-207ENST00000564060 PRM1P04553 51 aa3.34□□□□□ -1.87
CMTM3-207ENST00000564060 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
CMTM3-207ENST00000564060 KRTAP21-1Q3LI58 79 aa2.76□□□□□ -1.97
CMTM3-207ENST00000564060 MUC16Q8WXI7 14507 aa2.34□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 62 ms