RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 A8MU10 97 aa3.36□□□□□ -1.87
CLN6-203ENST00000563917 PRR15LQ9BU68 103 aa3.36□□□□□ -1.87
CLN6-203ENST00000563917 C10orf95Q9H7T3 257 aa3.36□□□□□ -1.87
CLN6-203ENST00000563917 LCE3AQ5TA76 89 aa3.34□□□□□ -1.87
CLN6-203ENST00000563917 ANAPC13Q9BS18 74 aa3.29□□□□□ -1.88
CLN6-203ENST00000563917 HMCN1Q96RW7 5635 aa3.29□□□□□ -1.88
CLN6-203ENST00000563917 KRTAP4-3Q9BYR4 195 aa3.28□□□□□ -1.88
CLN6-203ENST00000563917 KRTAP5-4Q6L8H1 288 aa3.27□□□□□ -1.89
CLN6-203ENST00000563917 ATP5EP56381 51 aaPredicted RBP3.26□□□□□ -1.89
CLN6-203ENST00000563917 KRTAP12-3P60328 96 aa3.25□□□□□ -1.89
CLN6-203ENST00000563917 KRTAP4-6Q9BYQ5 205 aa3.23□□□□□ -1.89
CLN6-203ENST00000563917 AHNAK2Q8IVF2 5795 aa3.21□□□□□ -1.9
CLN6-203ENST00000563917 UQCR11O14957 56 aa3.21□□□□□ -1.9
CLN6-203ENST00000563917 LINC01558Q9Y6Z2 57 aa3.21□□□□□ -1.9
CLN6-203ENST00000563917 KRTAP5-10Q6L8G5 202 aa3.2□□□□□ -1.9
CLN6-203ENST00000563917 KRTAP19-4Q3LI73 84 aa3.19□□□□□ -1.9
CLN6-203ENST00000563917 CCDC179H3BU77 68 aa3.18□□□□□ -1.9
CLN6-203ENST00000563917 PRAC1Q96KF2 57 aa3.18□□□□□ -1.9
CLN6-203ENST00000563917 KRTAP4-7Q9BYR0 210 aa3.18□□□□□ -1.9
CLN6-203ENST00000563917 K7ERS5 55 aa3.17□□□□□ -1.9
CLN6-203ENST00000563917 PRO0628Q9UI54 55 aa3.16□□□□□ -1.9
CLN6-203ENST00000563917 KRTAP25-1Q3LHN0 102 aa3.15□□□□□ -1.91
CLN6-203ENST00000563917 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
CLN6-203ENST00000563917 KRTAP5-3Q6L8H2 238 aa3.13□□□□□ -1.91
CLN6-203ENST00000563917 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
CLN6-203ENST00000563917 SPRR5A0A1B0GTR4 108 aa3.11□□□□□ -1.91
CLN6-203ENST00000563917 MIR22HGQ0VDD5 57 aa3.11□□□□□ -1.91
CLN6-203ENST00000563917 TMEM258P61165 79 aa3.1□□□□□ -1.91
CLN6-203ENST00000563917 KRTAP5-7Q6L8G8 165 aa3.1□□□□□ -1.91
CLN6-203ENST00000563917 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.91
CLN6-203ENST00000563917 PSPHP1O15172 72 aa3.05□□□□□ -1.92
CLN6-203ENST00000563917 PMAIP1Q13794 54 aa3.04□□□□□ -1.92
CLN6-203ENST00000563917 LOC100996750A0A140TA64 210 aa3.02□□□□□ -1.93
CLN6-203ENST00000563917 SYNE1Q8NF91 8797 aaKnown RBP3.01□□□□□ -1.93
CLN6-203ENST00000563917 KRTAP15-1Q3LI76 137 aa3.01□□□□□ -1.93
CLN6-203ENST00000563917 LCE3CQ5T5A8 94 aa2.97□□□□□ -1.93
CLN6-203ENST00000563917 CDC42SE1Q9NRR8 79 aa2.93□□□□□ -1.94
CLN6-203ENST00000563917 A6NED7 52 aa2.91□□□□□ -1.94
CLN6-203ENST00000563917 Q1T7F1 81 aa2.91□□□□□ -1.94
CLN6-203ENST00000563917 RPS28P62857 69 aaKnown RBP2.9□□□□□ -1.95
CLN6-203ENST00000563917 MT1AP04731 61 aa2.89□□□□□ -1.95
CLN6-203ENST00000563917 KRTAP4-11Q9BYQ6 195 aa2.88□□□□□ -1.95
CLN6-203ENST00000563917 KRTAP6-1Q3LI64 71 aa2.85□□□□□ -1.95
CLN6-203ENST00000563917 ROMO1P60602 79 aa2.84□□□□□ -1.95
CLN6-203ENST00000563917 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
CLN6-203ENST00000563917 KTN1-AS1Q86SY8 53 aa2.81□□□□□ -1.96
CLN6-203ENST00000563917 LUZP6Q538Z0 58 aa2.8□□□□□ -1.96
CLN6-203ENST00000563917 KRTAP9-4Q9BYQ2 154 aa2.8□□□□□ -1.96
CLN6-203ENST00000563917 KRTAP6-2Q3LI66 62 aa2.77□□□□□ -1.97
CLN6-203ENST00000563917 NDUFAF8A1L188 74 aa2.76□□□□□ -1.97
CLN6-203ENST00000563917 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
CLN6-203ENST00000563917 KRTAP9-6A8MVA2 160 aa2.73□□□□□ -1.97
CLN6-203ENST00000563917 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.98
CLN6-203ENST00000563917 KRTAP9-9Q9BYP9 154 aa2.71□□□□□ -1.98
CLN6-203ENST00000563917 BRK1Q8WUW1 75 aa2.7□□□□□ -1.98
CLN6-203ENST00000563917 AHNAKQ09666 5890 aaKnown RBP2.7□□□□□ -1.98
CLN6-203ENST00000563917 MT3P25713 68 aa2.69□□□□□ -1.98
CLN6-203ENST00000563917 MUC5ACP98088 5654 aa2.69□□□□□ -1.98
CLN6-203ENST00000563917 KRTAP4-12Q9BQ66 201 aa2.68□□□□□ -1.98
CLN6-203ENST00000563917 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
CLN6-203ENST00000563917 KRTAP5-1Q6L8H4 278 aa2.56□□□□□ -2
CLN6-203ENST00000563917 LCE1EQ5T753 118 aa2.46□□□□□ -2.02
CLN6-203ENST00000563917 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
CLN6-203ENST00000563917 KRTAP4-2Q9BYR5 136 aa2.3□□□□□ -2.04
CLN6-203ENST00000563917 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
CLN6-203ENST00000563917 LCE1FQ5T754 118 aa2.15□□□□□ -2.07
CLN6-203ENST00000563917 LCE3DQ9BYE3 92 aa2.15□□□□□ -2.07
CLN6-203ENST00000563917 KRTAP5-11Q6L8G4 156 aa2.06□□□□□ -2.08
CLN6-203ENST00000563917 INE1O15225 51 aa2.04□□□□□ -2.08
CLN6-203ENST00000563917 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.04□□□□□ -2.08
CLN6-203ENST00000563917 LCE3EQ5T5B0 92 aa2□□□□□ -2.09
CLN6-203ENST00000563917 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
CLN6-203ENST00000563917 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
CLN6-203ENST00000563917 KRTAP4-4Q9BYR3 166 aa1.74□□□□□ -2.13
CLN6-203ENST00000563917 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
CLN6-203ENST00000563917 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
CLN6-203ENST00000563917 PRM1P04553 51 aa1.43□□□□□ -2.18
CLN6-203ENST00000563917 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 21.3 ms