RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 KRTAP19-3Q7Z4W3 81 aa6.54□□□□□ -1.36
CDH5-204ENST00000563425 MT1GP13640 62 aa6.52□□□□□ -1.37
CDH5-204ENST00000563425 MT1MQ8N339 61 aa6.49□□□□□ -1.37
CDH5-204ENST00000563425 KRTAP4-3Q9BYR4 195 aa6.45□□□□□ -1.38
CDH5-204ENST00000563425 SPRR2FQ96RM1 72 aa6.44□□□□□ -1.38
CDH5-204ENST00000563425 CRCT1Q9UGL9 99 aa6.43□□□□□ -1.38
CDH5-204ENST00000563425 MUC12Q9UKN1 5478 aa6.43□□□□□ -1.38
CDH5-204ENST00000563425 KRTAP2-3P0C7H8 128 aa6.42□□□□□ -1.38
CDH5-204ENST00000563425 KRTAP2-4Q9BYR9 128 aa6.42□□□□□ -1.38
CDH5-204ENST00000563425 KRTAP2-1Q9BYU5 128 aa6.42□□□□□ -1.38
CDH5-204ENST00000563425 INE1O15225 51 aa6.38□□□□□ -1.39
CDH5-204ENST00000563425 LCE5AQ5TCM9 118 aa6.37□□□□□ -1.39
CDH5-204ENST00000563425 LOC100996750A0A140TA64 210 aa6.33□□□□□ -1.4
CDH5-204ENST00000563425 MACF1Q9UPN3 7388 aaKnown RBP6.24□□□□□ -1.41
CDH5-204ENST00000563425 KRTAP5-9P26371 169 aa6.19□□□□□ -1.42
CDH5-204ENST00000563425 LCE1AQ5T7P2 110 aa6.09□□□□□ -1.43
CDH5-204ENST00000563425 SYNE2Q8WXH0 6885 aaKnown RBP6.01□□□□□ -1.45
CDH5-204ENST00000563425 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.99□□□□□ -1.45
CDH5-204ENST00000563425 KRTAP9-7A8MTY7 169 aa5.97□□□□□ -1.45
CDH5-204ENST00000563425 SPRR2EP22531 72 aa5.96□□□□□ -1.46
CDH5-204ENST00000563425 SPRR2BP35325 72 aa5.96□□□□□ -1.46
CDH5-204ENST00000563425 SPRR2AP35326 72 aa5.96□□□□□ -1.46
CDH5-204ENST00000563425 MDN1Q9NU22 5596 aa5.95□□□□□ -1.46
CDH5-204ENST00000563425 DSTQ03001 7570 aaKnown RBP5.93□□□□□ -1.46
CDH5-204ENST00000563425 KRTAP6-3Q3LI67 103 aa5.82□□□□□ -1.48
CDH5-204ENST00000563425 MT1AP04731 61 aa5.8□□□□□ -1.48
CDH5-204ENST00000563425 KRTAP5-5Q701N2 237 aaPredicted RBP5.8□□□□□ -1.48
CDH5-204ENST00000563425 KRTAP6-1Q3LI64 71 aa5.8□□□□□ -1.48
CDH5-204ENST00000563425 LCE3BQ5TA77 95 aa5.75□□□□□ -1.49
CDH5-204ENST00000563425 SPRR2DP22532 72 aa5.73□□□□□ -1.49
CDH5-204ENST00000563425 KRTAP12-4P60329 112 aa5.55□□□□□ -1.52
CDH5-204ENST00000563425 KRTAP4-9Q9BYQ8 210 aa5.55□□□□□ -1.52
CDH5-204ENST00000563425 KRTAP9-4Q9BYQ2 154 aa5.48□□□□□ -1.53
CDH5-204ENST00000563425 SYNE1Q8NF91 8797 aaKnown RBP5.41□□□□□ -1.54
CDH5-204ENST00000563425 LCE3DQ9BYE3 92 aa5.38□□□□□ -1.55
CDH5-204ENST00000563425 NEBP20929 6669 aa5.31□□□□□ -1.56
CDH5-204ENST00000563425 KRTAP5-4Q6L8H1 288 aa5.29□□□□□ -1.56
CDH5-204ENST00000563425 LCE3EQ5T5B0 92 aa5.28□□□□□ -1.56
CDH5-204ENST00000563425 KRTAP20-1Q3LI63 56 aa5.25□□□□□ -1.57
CDH5-204ENST00000563425 KRTAP6-2Q3LI66 62 aa5.25□□□□□ -1.57
CDH5-204ENST00000563425 MT3P25713 68 aa5.22□□□□□ -1.57
CDH5-204ENST00000563425 LCE4AQ5TA78 99 aa5.05□□□□□ -1.6
CDH5-204ENST00000563425 KRTAP4-6Q9BYQ5 205 aa5.03□□□□□ -1.6
CDH5-204ENST00000563425 MT4P47944 62 aa4.99□□□□□ -1.61
CDH5-204ENST00000563425 KRTAP20-2Q3LI61 65 aa4.93□□□□□ -1.62
CDH5-204ENST00000563425 KRTAP2-2Q9BYT5 123 aa4.91□□□□□ -1.62
CDH5-204ENST00000563425 KRTAP5-2Q701N4 177 aa4.89□□□□□ -1.63
CDH5-204ENST00000563425 PRM1P04553 51 aa4.86□□□□□ -1.63
CDH5-204ENST00000563425 LCE1DQ5T752 114 aa4.8□□□□□ -1.64
CDH5-204ENST00000563425 HMCN1Q96RW7 5635 aa4.74□□□□□ -1.65
CDH5-204ENST00000563425 KRTAP5-3Q6L8H2 238 aa4.74□□□□□ -1.65
CDH5-204ENST00000563425 OBSCNQ5VST9 7968 aa4.7□□□□□ -1.66
CDH5-204ENST00000563425 GPR98Q8WXG9 6306 aa4.42□□□□□ -1.7
CDH5-204ENST00000563425 LCE1EQ5T753 118 aa4.4□□□□□ -1.71
CDH5-204ENST00000563425 MUC5ACP98088 5654 aa4.26□□□□□ -1.73
CDH5-204ENST00000563425 LCE1BQ5T7P3 118 aa4.19□□□□□ -1.74
CDH5-204ENST00000563425 KRTAP5-10Q6L8G5 202 aa4.17□□□□□ -1.74
CDH5-204ENST00000563425 KRTAP5-1Q6L8H4 278 aa4.17□□□□□ -1.74
CDH5-204ENST00000563425 KRTAP4-11Q9BYQ6 195 aa4.15□□□□□ -1.74
CDH5-204ENST00000563425 KRTAP4-2Q9BYR5 136 aa4.13□□□□□ -1.75
CDH5-204ENST00000563425 LCE1CQ5T751 118 aa4.13□□□□□ -1.75
CDH5-204ENST00000563425 AHNAK2Q8IVF2 5795 aa4.09□□□□□ -1.75
CDH5-204ENST00000563425 KRTAP5-8O75690 187 aa3.99□□□□□ -1.77
CDH5-204ENST00000563425 KRTAP5-7Q6L8G8 165 aa3.99□□□□□ -1.77
CDH5-204ENST00000563425 KRTAP9-9Q9BYP9 154 aa3.93□□□□□ -1.78
CDH5-204ENST00000563425 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.9□□□□□ -1.78
CDH5-204ENST00000563425 KRTAP21-2Q3LI59 83 aa3.78□□□□□ -1.8
CDH5-204ENST00000563425 KRTAP4-12Q9BQ66 201 aa3.76□□□□□ -1.81
CDH5-204ENST00000563425 KRTAP5-11Q6L8G4 156 aa3.59□□□□□ -1.83
CDH5-204ENST00000563425 AHNAKQ09666 5890 aaKnown RBP3.41□□□□□ -1.86
CDH5-204ENST00000563425 MUC5BQ9HC84 5762 aaPredicted RBP3.37□□□□□ -1.87
CDH5-204ENST00000563425 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
CDH5-204ENST00000563425 PHGR1C9JFL3 82 aa3.09□□□□□ -1.92
CDH5-204ENST00000563425 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
CDH5-204ENST00000563425 KRTAP21-1Q3LI58 79 aa3.05□□□□□ -1.92
CDH5-204ENST00000563425 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
CDH5-204ENST00000563425 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 168.8 ms