RNA–Protein interactions for RNA: ENST00000561660.1

FANCA-206, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-206ENST00000561660 KRTAP4-9Q9BYQ8 210 aa6.35□□□□□ -1.39
FANCA-206ENST00000561660 UQCR11O14957 56 aa6.3□□□□□ -1.4
FANCA-206ENST00000561660 KRTAP4-3Q9BYR4 195 aa6.28□□□□□ -1.4
FANCA-206ENST00000561660 GPR98Q8WXG9 6306 aa6.23□□□□□ -1.41
FANCA-206ENST00000561660 HMCN1Q96RW7 5635 aa6.21□□□□□ -1.42
FANCA-206ENST00000561660 LCE1DQ5T752 114 aa6.19□□□□□ -1.42
FANCA-206ENST00000561660 KRTAP12-3P60328 96 aa6.18□□□□□ -1.42
FANCA-206ENST00000561660 MIR22HGQ0VDD5 57 aa6.17□□□□□ -1.42
FANCA-206ENST00000561660 LCE4AQ5TA78 99 aa6.16□□□□□ -1.42
FANCA-206ENST00000561660 RPS28P62857 69 aaKnown RBP6.15□□□□□ -1.42
FANCA-206ENST00000561660 KRTAP4-7Q9BYR0 210 aa6.15□□□□□ -1.42
FANCA-206ENST00000561660 MT4P47944 62 aa6.11□□□□□ -1.43
FANCA-206ENST00000561660 KRTAP5-4Q6L8H1 288 aa6.1□□□□□ -1.43
FANCA-206ENST00000561660 PSPHP1O15172 72 aa6.07□□□□□ -1.44
FANCA-206ENST00000561660 KRTAP25-1Q3LHN0 102 aa6.06□□□□□ -1.44
FANCA-206ENST00000561660 Q1T7F1 81 aa6.05□□□□□ -1.44
FANCA-206ENST00000561660 V9GYY9 64 aa6.02□□□□□ -1.45
FANCA-206ENST00000561660 K7ERS5 55 aa5.98□□□□□ -1.45
FANCA-206ENST00000561660 KRTAP4-6Q9BYQ5 205 aa5.98□□□□□ -1.45
FANCA-206ENST00000561660 AHNAK2Q8IVF2 5795 aa5.98□□□□□ -1.45
FANCA-206ENST00000561660 KRTAP5-5Q701N2 237 aaPredicted RBP5.89□□□□□ -1.47
FANCA-206ENST00000561660 KRTAP23-1A1A580 65 aa5.84□□□□□ -1.47
FANCA-206ENST00000561660 A6NED7 52 aa5.83□□□□□ -1.48
FANCA-206ENST00000561660 LOC100996750A0A140TA64 210 aa5.82□□□□□ -1.48
FANCA-206ENST00000561660 KRTAP19-4Q3LI73 84 aa5.78□□□□□ -1.48
FANCA-206ENST00000561660 KRTAP15-1Q3LI76 137 aa5.78□□□□□ -1.48
FANCA-206ENST00000561660 PRO0628Q9UI54 55 aa5.78□□□□□ -1.48
FANCA-206ENST00000561660 KRTAP5-10Q6L8G5 202 aa5.76□□□□□ -1.49
FANCA-206ENST00000561660 SYNE1Q8NF91 8797 aaKnown RBP5.75□□□□□ -1.49
FANCA-206ENST00000561660 KRTAP20-2Q3LI61 65 aa5.74□□□□□ -1.49
FANCA-206ENST00000561660 CDC42SE1Q9NRR8 79 aa5.71□□□□□ -1.5
FANCA-206ENST00000561660 LCE3CQ5T5A8 94 aa5.7□□□□□ -1.5
FANCA-206ENST00000561660 SPRR5A0A1B0GTR4 108 aa5.69□□□□□ -1.5
FANCA-206ENST00000561660 KRTAP12-4P60329 112 aa5.65□□□□□ -1.5
FANCA-206ENST00000561660 ROMO1P60602 79 aa5.65□□□□□ -1.5
FANCA-206ENST00000561660 KRTAP5-3Q6L8H2 238 aa5.62□□□□□ -1.51
FANCA-206ENST00000561660 BRK1Q8WUW1 75 aa5.56□□□□□ -1.52
FANCA-206ENST00000561660 KRTAP5-7Q6L8G8 165 aa5.51□□□□□ -1.53
FANCA-206ENST00000561660 KRTAP9-6A8MVA2 160 aa5.45□□□□□ -1.54
FANCA-206ENST00000561660 KRTAP6-1Q3LI64 71 aa5.45□□□□□ -1.54
FANCA-206ENST00000561660 MT1AP04731 61 aa5.44□□□□□ -1.54
FANCA-206ENST00000561660 PMAIP1Q13794 54 aa5.41□□□□□ -1.54
FANCA-206ENST00000561660 KRTAP5-2Q701N4 177 aa5.35□□□□□ -1.55
FANCA-206ENST00000561660 KTN1-AS1Q86SY8 53 aa5.28□□□□□ -1.56
FANCA-206ENST00000561660 KRTAP9-4Q9BYQ2 154 aa5.27□□□□□ -1.57
FANCA-206ENST00000561660 KRTAP4-11Q9BYQ6 195 aa5.24□□□□□ -1.57
FANCA-206ENST00000561660 KRTAP6-2Q3LI66 62 aa5.18□□□□□ -1.58
FANCA-206ENST00000561660 KRTAP5-8O75690 187 aa5.08□□□□□ -1.6
FANCA-206ENST00000561660 OBSCNQ5VST9 7968 aa5.04□□□□□ -1.6
FANCA-206ENST00000561660 MT3P25713 68 aa4.96□□□□□ -1.62
FANCA-206ENST00000561660 MUC5BQ9HC84 5762 aaPredicted RBP4.96□□□□□ -1.62
FANCA-206ENST00000561660 AHNAKQ09666 5890 aaKnown RBP4.93□□□□□ -1.62
FANCA-206ENST00000561660 MUC5ACP98088 5654 aa4.87□□□□□ -1.63
FANCA-206ENST00000561660 KRTAP5-1Q6L8H4 278 aa4.81□□□□□ -1.64
FANCA-206ENST00000561660 PRAC1Q96KF2 57 aa4.79□□□□□ -1.64
FANCA-206ENST00000561660 KRTAP9-9Q9BYP9 154 aa4.76□□□□□ -1.65
FANCA-206ENST00000561660 H3BS24 57 aa4.58□□□□□ -1.68
FANCA-206ENST00000561660 LCE1EQ5T753 118 aa4.56□□□□□ -1.68
FANCA-206ENST00000561660 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
FANCA-206ENST00000561660 LCE1BQ5T7P3 118 aa4.3□□□□□ -1.72
FANCA-206ENST00000561660 LCE1CQ5T751 118 aa4.24□□□□□ -1.73
FANCA-206ENST00000561660 NDUFAF8A1L188 74 aa4.15□□□□□ -1.75
FANCA-206ENST00000561660 LCE3DQ9BYE3 92 aa4.09□□□□□ -1.75
FANCA-206ENST00000561660 LUZP6Q538Z0 58 aa3.97□□□□□ -1.77
FANCA-206ENST00000561660 KRTAP4-12Q9BQ66 201 aa3.94□□□□□ -1.78
FANCA-206ENST00000561660 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
FANCA-206ENST00000561660 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.87□□□□□ -1.79
FANCA-206ENST00000561660 LCE3EQ5T5B0 92 aa3.85□□□□□ -1.79
FANCA-206ENST00000561660 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.79
FANCA-206ENST00000561660 LCE1FQ5T754 118 aa3.71□□□□□ -1.82
FANCA-206ENST00000561660 KRTAP21-2Q3LI59 83 aa3.6□□□□□ -1.83
FANCA-206ENST00000561660 INE1O15225 51 aa3.58□□□□□ -1.84
FANCA-206ENST00000561660 PHGR1C9JFL3 82 aa3.32□□□□□ -1.88
FANCA-206ENST00000561660 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
FANCA-206ENST00000561660 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
FANCA-206ENST00000561660 PRM1P04553 51 aa2.91□□□□□ -1.94
FANCA-206ENST00000561660 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
FANCA-206ENST00000561660 MUC16Q8WXI7 14507 aa2.27□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 12.7 ms