RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 KRTAP4-9Q9BYQ8 210 aa8.31□□□□□ -1.08
CDR2-202ENST00000561630 V9GYY9 64 aa8.26□□□□□ -1.09
CDR2-202ENST00000561630 K7ERS5 55 aa8.25□□□□□ -1.09
CDR2-202ENST00000561630 KRTAP12-3P60328 96 aa8.25□□□□□ -1.09
CDR2-202ENST00000561630 KRTAP4-3Q9BYR4 195 aa8.22□□□□□ -1.09
CDR2-202ENST00000561630 PSPHP1O15172 72 aa8.21□□□□□ -1.1
CDR2-202ENST00000561630 Q1T7F1 81 aa8.2□□□□□ -1.1
CDR2-202ENST00000561630 KRTAP25-1Q3LHN0 102 aa8.18□□□□□ -1.1
CDR2-202ENST00000561630 GPR98Q8WXG9 6306 aa8.17□□□□□ -1.1
CDR2-202ENST00000561630 LCE4AQ5TA78 99 aa8.15□□□□□ -1.1
CDR2-202ENST00000561630 HMCN1Q96RW7 5635 aa8.13□□□□□ -1.11
CDR2-202ENST00000561630 LCE1DQ5T752 114 aa8.13□□□□□ -1.11
CDR2-202ENST00000561630 KRTAP4-7Q9BYR0 210 aa8.07□□□□□ -1.12
CDR2-202ENST00000561630 MT4P47944 62 aa8.03□□□□□ -1.12
CDR2-202ENST00000561630 KRTAP5-4Q6L8H1 288 aa8.03□□□□□ -1.12
CDR2-202ENST00000561630 A6NED7 52 aa7.92□□□□□ -1.14
CDR2-202ENST00000561630 KRTAP23-1A1A580 65 aa7.89□□□□□ -1.15
CDR2-202ENST00000561630 KRTAP4-6Q9BYQ5 205 aa7.84□□□□□ -1.15
CDR2-202ENST00000561630 KRTAP19-4Q3LI73 84 aa7.82□□□□□ -1.16
CDR2-202ENST00000561630 RPS28P62857 69 aaKnown RBP7.8□□□□□ -1.16
CDR2-202ENST00000561630 AHNAK2Q8IVF2 5795 aa7.77□□□□□ -1.17
CDR2-202ENST00000561630 KRTAP5-5Q701N2 237 aaPredicted RBP7.76□□□□□ -1.17
CDR2-202ENST00000561630 CDC42SE1Q9NRR8 79 aa7.75□□□□□ -1.17
CDR2-202ENST00000561630 KRTAP15-1Q3LI76 137 aa7.73□□□□□ -1.17
CDR2-202ENST00000561630 PCP4P48539 62 aa7.67□□□□□ -1.18
CDR2-202ENST00000561630 LOC100996750A0A140TA64 210 aa7.64□□□□□ -1.19
CDR2-202ENST00000561630 ROMO1P60602 79 aa7.64□□□□□ -1.19
CDR2-202ENST00000561630 LCE3CQ5T5A8 94 aa7.6□□□□□ -1.19
CDR2-202ENST00000561630 KRTAP20-2Q3LI61 65 aa7.56□□□□□ -1.2
CDR2-202ENST00000561630 SPRR5A0A1B0GTR4 108 aa7.55□□□□□ -1.2
CDR2-202ENST00000561630 KRTAP5-10Q6L8G5 202 aa7.54□□□□□ -1.2
CDR2-202ENST00000561630 KRTAP12-4P60329 112 aa7.53□□□□□ -1.2
CDR2-202ENST00000561630 SYNE1Q8NF91 8797 aaKnown RBP7.5□□□□□ -1.21
CDR2-202ENST00000561630 KRTAP5-3Q6L8H2 238 aa7.38□□□□□ -1.23
CDR2-202ENST00000561630 KRTAP5-7Q6L8G8 165 aa7.23□□□□□ -1.25
CDR2-202ENST00000561630 MT1AP04731 61 aa7.22□□□□□ -1.25
CDR2-202ENST00000561630 KRTAP9-6A8MVA2 160 aa7.18□□□□□ -1.26
CDR2-202ENST00000561630 KRTAP6-1Q3LI64 71 aa7.18□□□□□ -1.26
CDR2-202ENST00000561630 KRTAP5-2Q701N4 177 aa7.04□□□□□ -1.28
CDR2-202ENST00000561630 KRTAP9-4Q9BYQ2 154 aa6.98□□□□□ -1.29
CDR2-202ENST00000561630 KRTAP4-11Q9BYQ6 195 aa6.9□□□□□ -1.3
CDR2-202ENST00000561630 KRTAP6-2Q3LI66 62 aa6.85□□□□□ -1.31
CDR2-202ENST00000561630 BRK1Q8WUW1 75 aa6.81□□□□□ -1.32
CDR2-202ENST00000561630 KRTAP5-8O75690 187 aa6.66□□□□□ -1.34
CDR2-202ENST00000561630 OBSCNQ5VST9 7968 aa6.63□□□□□ -1.35
CDR2-202ENST00000561630 MT3P25713 68 aa6.61□□□□□ -1.35
CDR2-202ENST00000561630 MUC5BQ9HC84 5762 aaPredicted RBP6.44□□□□□ -1.38
CDR2-202ENST00000561630 AHNAKQ09666 5890 aaKnown RBP6.42□□□□□ -1.38
CDR2-202ENST00000561630 PMAIP1Q13794 54 aa6.41□□□□□ -1.38
CDR2-202ENST00000561630 MUC5ACP98088 5654 aa6.39□□□□□ -1.39
CDR2-202ENST00000561630 KRTAP5-1Q6L8H4 278 aa6.31□□□□□ -1.4
CDR2-202ENST00000561630 KRTAP9-9Q9BYP9 154 aa6.3□□□□□ -1.4
CDR2-202ENST00000561630 SVIPQ8NHG7 77 aa6.27□□□□□ -1.41
CDR2-202ENST00000561630 PRAC1Q96KF2 57 aa6.18□□□□□ -1.42
CDR2-202ENST00000561630 LCE1EQ5T753 118 aa6.07□□□□□ -1.44
CDR2-202ENST00000561630 PRO0628Q9UI54 55 aa5.91□□□□□ -1.46
CDR2-202ENST00000561630 KRTAP4-2Q9BYR5 136 aa5.72□□□□□ -1.49
CDR2-202ENST00000561630 LCE1BQ5T7P3 118 aa5.68□□□□□ -1.5
CDR2-202ENST00000561630 KTN1-AS1Q86SY8 53 aa5.67□□□□□ -1.5
CDR2-202ENST00000561630 LCE1CQ5T751 118 aa5.63□□□□□ -1.51
CDR2-202ENST00000561630 LCE3DQ9BYE3 92 aa5.49□□□□□ -1.53
CDR2-202ENST00000561630 LUZP6Q538Z0 58 aa5.33□□□□□ -1.56
CDR2-202ENST00000561630 LCE3EQ5T5B0 92 aa5.17□□□□□ -1.58
CDR2-202ENST00000561630 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.14□□□□□ -1.59
CDR2-202ENST00000561630 KRTAP4-12Q9BQ66 201 aa5.14□□□□□ -1.59
CDR2-202ENST00000561630 KRTAP5-11Q6L8G4 156 aa5.09□□□□□ -1.59
CDR2-202ENST00000561630 LCE1FQ5T754 118 aa4.94□□□□□ -1.62
CDR2-202ENST00000561630 KRTAP21-2Q3LI59 83 aa4.74□□□□□ -1.65
CDR2-202ENST00000561630 H3BS24 57 aa4.48□□□□□ -1.69
CDR2-202ENST00000561630 PHGR1C9JFL3 82 aa4.4□□□□□ -1.71
CDR2-202ENST00000561630 A0A0A0MQY5 61 aa4.38□□□□□ -1.71
CDR2-202ENST00000561630 KRTAP4-4Q9BYR3 166 aa4.3□□□□□ -1.72
CDR2-202ENST00000561630 NDUFAF8A1L188 74 aa4.13□□□□□ -1.75
CDR2-202ENST00000561630 MUC19Q7Z5P9 8384 aa4.09□□□□□ -1.75
CDR2-202ENST00000561630 PRM1P04553 51 aa3.9□□□□□ -1.79
CDR2-202ENST00000561630 INE1O15225 51 aa3.38□□□□□ -1.87
CDR2-202ENST00000561630 KRTAP21-1Q3LI58 79 aa3.33□□□□□ -1.88
CDR2-202ENST00000561630 MUC16Q8WXI7 14507 aa2.92□□□□□ -1.94
Retrieved 78 of 20,778 RNA–protein pairs in 104.8 ms