RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 V9GYY9 64 aa5.39□□□□□ -1.55
CCDC113-203ENST00000561517 Q1T7F1 81 aa5.37□□□□□ -1.55
CCDC113-203ENST00000561517 KRTAP12-3P60328 96 aa5.36□□□□□ -1.55
CCDC113-203ENST00000561517 KRTAP4-9Q9BYQ8 210 aa5.36□□□□□ -1.55
CCDC113-203ENST00000561517 PSPHP1O15172 72 aa5.34□□□□□ -1.55
CCDC113-203ENST00000561517 KRTAP4-3Q9BYR4 195 aa5.34□□□□□ -1.55
CCDC113-203ENST00000561517 KRTAP25-1Q3LHN0 102 aa5.33□□□□□ -1.56
CCDC113-203ENST00000561517 K7ERS5 55 aa5.31□□□□□ -1.56
CCDC113-203ENST00000561517 LCE4AQ5TA78 99 aa5.29□□□□□ -1.56
CCDC113-203ENST00000561517 LCE1DQ5T752 114 aa5.27□□□□□ -1.57
CCDC113-203ENST00000561517 KRTAP4-7Q9BYR0 210 aa5.24□□□□□ -1.57
CCDC113-203ENST00000561517 KRTAP5-4Q6L8H1 288 aa5.23□□□□□ -1.57
CCDC113-203ENST00000561517 MT4P47944 62 aa5.19□□□□□ -1.58
CCDC113-203ENST00000561517 KRTAP23-1A1A580 65 aa5.16□□□□□ -1.58
CCDC113-203ENST00000561517 A6NED7 52 aa5.16□□□□□ -1.58
CCDC113-203ENST00000561517 HMCN1Q96RW7 5635 aa5.16□□□□□ -1.58
CCDC113-203ENST00000561517 RPS28P62857 69 aaKnown RBP5.12□□□□□ -1.59
CCDC113-203ENST00000561517 KRTAP19-4Q3LI73 84 aa5.1□□□□□ -1.59
CCDC113-203ENST00000561517 GPR98Q8WXG9 6306 aa5.1□□□□□ -1.59
CCDC113-203ENST00000561517 KRTAP4-6Q9BYQ5 205 aa5.08□□□□□ -1.6
CCDC113-203ENST00000561517 PCP4P48539 62 aa5.07□□□□□ -1.6
CCDC113-203ENST00000561517 KRTAP5-5Q701N2 237 aaPredicted RBP5.04□□□□□ -1.6
CCDC113-203ENST00000561517 CDC42SE1Q9NRR8 79 aa5.04□□□□□ -1.6
CCDC113-203ENST00000561517 KRTAP15-1Q3LI76 137 aa5.03□□□□□ -1.6
CCDC113-203ENST00000561517 LOC100996750A0A140TA64 210 aa5.02□□□□□ -1.61
CCDC113-203ENST00000561517 AHNAK2Q8IVF2 5795 aa4.97□□□□□ -1.61
CCDC113-203ENST00000561517 ROMO1P60602 79 aa4.97□□□□□ -1.61
CCDC113-203ENST00000561517 LCE3CQ5T5A8 94 aa4.94□□□□□ -1.62
CCDC113-203ENST00000561517 KRTAP20-2Q3LI61 65 aa4.91□□□□□ -1.62
CCDC113-203ENST00000561517 SPRR5A0A1B0GTR4 108 aa4.9□□□□□ -1.63
CCDC113-203ENST00000561517 KRTAP5-10Q6L8G5 202 aa4.88□□□□□ -1.63
CCDC113-203ENST00000561517 KRTAP12-4P60329 112 aa4.87□□□□□ -1.63
CCDC113-203ENST00000561517 SYNE1Q8NF91 8797 aaKnown RBP4.78□□□□□ -1.64
CCDC113-203ENST00000561517 KRTAP5-3Q6L8H2 238 aa4.78□□□□□ -1.64
CCDC113-203ENST00000561517 MT1AP04731 61 aa4.71□□□□□ -1.66
CCDC113-203ENST00000561517 KRTAP5-7Q6L8G8 165 aa4.69□□□□□ -1.66
CCDC113-203ENST00000561517 KRTAP9-6A8MVA2 160 aa4.67□□□□□ -1.66
CCDC113-203ENST00000561517 KRTAP6-1Q3LI64 71 aa4.67□□□□□ -1.66
CCDC113-203ENST00000561517 KRTAP5-2Q701N4 177 aa4.59□□□□□ -1.67
CCDC113-203ENST00000561517 KRTAP9-4Q9BYQ2 154 aa4.54□□□□□ -1.68
CCDC113-203ENST00000561517 KRTAP4-11Q9BYQ6 195 aa4.47□□□□□ -1.69
CCDC113-203ENST00000561517 BRK1Q8WUW1 75 aa4.44□□□□□ -1.7
CCDC113-203ENST00000561517 KRTAP6-2Q3LI66 62 aa4.43□□□□□ -1.7
CCDC113-203ENST00000561517 KRTAP5-8O75690 187 aa4.32□□□□□ -1.72
CCDC113-203ENST00000561517 MT3P25713 68 aa4.29□□□□□ -1.72
CCDC113-203ENST00000561517 KRTAP4-12Q9BQ66 201 aa4.22□□□□□ -1.73
CCDC113-203ENST00000561517 KRTAP9-9Q9BYP9 154 aa4.22□□□□□ -1.73
CCDC113-203ENST00000561517 OBSCNQ5VST9 7968 aa4.19□□□□□ -1.74
CCDC113-203ENST00000561517 PMAIP1Q13794 54 aa4.19□□□□□ -1.74
CCDC113-203ENST00000561517 KRTAP5-1Q6L8H4 278 aa4.1□□□□□ -1.75
CCDC113-203ENST00000561517 MUC5BQ9HC84 5762 aaPredicted RBP4.08□□□□□ -1.76
CCDC113-203ENST00000561517 AHNAKQ09666 5890 aaKnown RBP4.06□□□□□ -1.76
CCDC113-203ENST00000561517 MUC5ACP98088 5654 aa4.05□□□□□ -1.76
CCDC113-203ENST00000561517 PRAC1Q96KF2 57 aa4.04□□□□□ -1.76
CCDC113-203ENST00000561517 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
CCDC113-203ENST00000561517 PRO0628Q9UI54 55 aa3.94□□□□□ -1.78
CCDC113-203ENST00000561517 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.79
CCDC113-203ENST00000561517 KTN1-AS1Q86SY8 53 aa3.76□□□□□ -1.81
CCDC113-203ENST00000561517 LCE1BQ5T7P3 118 aa3.67□□□□□ -1.82
CCDC113-203ENST00000561517 LCE1CQ5T751 118 aa3.66□□□□□ -1.82
CCDC113-203ENST00000561517 SVIPQ8NHG7 77 aa3.62□□□□□ -1.83
CCDC113-203ENST00000561517 LCE3DQ9BYE3 92 aa3.56□□□□□ -1.84
CCDC113-203ENST00000561517 H3BS24 57 aa3.45□□□□□ -1.86
CCDC113-203ENST00000561517 LUZP6Q538Z0 58 aa3.4□□□□□ -1.87
CCDC113-203ENST00000561517 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
CCDC113-203ENST00000561517 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
CCDC113-203ENST00000561517 KRTAP5-11Q6L8G4 156 aa3.31□□□□□ -1.88
CCDC113-203ENST00000561517 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
CCDC113-203ENST00000561517 KRTAP21-2Q3LI59 83 aa3.08□□□□□ -1.92
CCDC113-203ENST00000561517 PHGR1C9JFL3 82 aa2.86□□□□□ -1.95
CCDC113-203ENST00000561517 NDUFAF8A1L188 74 aa2.8□□□□□ -1.96
CCDC113-203ENST00000561517 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
CCDC113-203ENST00000561517 MUC19Q7Z5P9 8384 aa2.59□□□□□ -1.99
CCDC113-203ENST00000561517 PRM1P04553 51 aa2.53□□□□□ -2
CCDC113-203ENST00000561517 A0A0A0MQY5 61 aa2.29□□□□□ -2.04
CCDC113-203ENST00000561517 INE1O15225 51 aa2.25□□□□□ -2.05
CCDC113-203ENST00000561517 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
CCDC113-203ENST00000561517 MUC16Q8WXI7 14507 aa1.88□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 46.3 ms