RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 MT1GP13640 62 aa4.91□□□□□ -1.62
PBX1-219ENST00000560641 MT1MQ8N339 61 aa4.9□□□□□ -1.62
PBX1-219ENST00000560641 SSPOA2VEC9 5147 aa4.87□□□□□ -1.63
PBX1-219ENST00000560641 KRTAP4-3Q9BYR4 195 aa4.86□□□□□ -1.63
PBX1-219ENST00000560641 KRTAP19-3Q7Z4W3 81 aa4.84□□□□□ -1.63
PBX1-219ENST00000560641 LCE2DQ5TA82 110 aaPredicted RBP4.82□□□□□ -1.64
PBX1-219ENST00000560641 KRTAP19-6Q3LI70 58 aa4.79□□□□□ -1.64
PBX1-219ENST00000560641 KRTAP9-2Q9BYQ4 174 aa4.76□□□□□ -1.65
PBX1-219ENST00000560641 KRTAP5-5Q701N2 237 aaPredicted RBP4.69□□□□□ -1.66
PBX1-219ENST00000560641 LCE5AQ5TCM9 118 aa4.65□□□□□ -1.66
PBX1-219ENST00000560641 LCE3EQ5T5B0 92 aa4.64□□□□□ -1.67
PBX1-219ENST00000560641 LCE3BQ5TA77 95 aa4.63□□□□□ -1.67
PBX1-219ENST00000560641 LCE3DQ9BYE3 92 aa4.63□□□□□ -1.67
PBX1-219ENST00000560641 CRCT1Q9UGL9 99 aa4.59□□□□□ -1.67
PBX1-219ENST00000560641 PRM1P04553 51 aa4.59□□□□□ -1.68
PBX1-219ENST00000560641 KRTAP4-9Q9BYQ8 210 aa4.58□□□□□ -1.68
PBX1-219ENST00000560641 KRTAP9-7A8MTY7 169 aa4.56□□□□□ -1.68
PBX1-219ENST00000560641 KRTAP6-1Q3LI64 71 aa4.51□□□□□ -1.69
PBX1-219ENST00000560641 FCGBPQ9Y6R7 5405 aaPredicted RBP4.48□□□□□ -1.69
PBX1-219ENST00000560641 KRTAP9-6A0A140TA67 174 aa4.48□□□□□ -1.69
PBX1-219ENST00000560641 KRTAP6-3Q3LI67 103 aa4.43□□□□□ -1.7
PBX1-219ENST00000560641 MUC12Q9UKN1 5478 aa4.42□□□□□ -1.7
PBX1-219ENST00000560641 SPRR2FQ96RM1 72 aa4.42□□□□□ -1.7
PBX1-219ENST00000560641 KRTAP6-2Q3LI66 62 aa4.34□□□□□ -1.72
PBX1-219ENST00000560641 KRTAP2-2Q9BYT5 123 aa4.31□□□□□ -1.72
PBX1-219ENST00000560641 SYNE1Q8NF91 8797 aaKnown RBP4.27□□□□□ -1.73
PBX1-219ENST00000560641 KRTAP9-4Q9BYQ2 154 aa4.22□□□□□ -1.73
PBX1-219ENST00000560641 LCE1AQ5T7P2 110 aa4.15□□□□□ -1.75
PBX1-219ENST00000560641 SPRR2AP35326 72 aa4.12□□□□□ -1.75
PBX1-219ENST00000560641 DSTQ03001 7570 aaKnown RBP4.07□□□□□ -1.76
PBX1-219ENST00000560641 MT3P25713 68 aa4□□□□□ -1.77
PBX1-219ENST00000560641 SPRR2EP22531 72 aa4□□□□□ -1.77
PBX1-219ENST00000560641 KRTAP5-9P26371 169 aa3.98□□□□□ -1.77
PBX1-219ENST00000560641 SPRR2BP35325 72 aa3.89□□□□□ -1.79
PBX1-219ENST00000560641 FSIP2Q5CZC0 6907 aa3.86□□□□□ -1.79
PBX1-219ENST00000560641 MACF1Q9UPN3 7388 aaKnown RBP3.8□□□□□ -1.8
PBX1-219ENST00000560641 MDN1Q9NU22 5596 aa3.78□□□□□ -1.8
PBX1-219ENST00000560641 SPRR2DP22532 72 aa3.75□□□□□ -1.81
PBX1-219ENST00000560641 SYNE2Q8WXH0 6885 aaKnown RBP3.75□□□□□ -1.81
PBX1-219ENST00000560641 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
PBX1-219ENST00000560641 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
PBX1-219ENST00000560641 LCE1DQ5T752 114 aa3.61□□□□□ -1.83
PBX1-219ENST00000560641 KRTAP5-2Q701N4 177 aa3.51□□□□□ -1.85
PBX1-219ENST00000560641 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.47□□□□□ -1.85
PBX1-219ENST00000560641 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
PBX1-219ENST00000560641 KRTAP5-10Q6L8G5 202 aa3.4□□□□□ -1.86
PBX1-219ENST00000560641 MUC5ACP98088 5654 aa3.39□□□□□ -1.87
PBX1-219ENST00000560641 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
PBX1-219ENST00000560641 KRTAP4-11Q9BYQ6 195 aa3.35□□□□□ -1.87
PBX1-219ENST00000560641 KRTAP20-2Q3LI61 65 aa3.29□□□□□ -1.88
PBX1-219ENST00000560641 KRTAP4-6Q9BYQ5 205 aa3.24□□□□□ -1.89
PBX1-219ENST00000560641 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
PBX1-219ENST00000560641 LCE4AQ5TA78 99 aa3.21□□□□□ -1.9
PBX1-219ENST00000560641 KRTAP5-3Q6L8H2 238 aa3.17□□□□□ -1.9
PBX1-219ENST00000560641 KRTAP20-1Q3LI63 56 aa3.12□□□□□ -1.91
PBX1-219ENST00000560641 NEBP20929 6669 aa3.11□□□□□ -1.91
PBX1-219ENST00000560641 KRTAP21-1Q3LI58 79 aa3.1□□□□□ -1.91
PBX1-219ENST00000560641 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
PBX1-219ENST00000560641 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
PBX1-219ENST00000560641 MT4P47944 62 aa3.05□□□□□ -1.92
PBX1-219ENST00000560641 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.03□□□□□ -1.92
PBX1-219ENST00000560641 KRTAP4-2Q9BYR5 136 aa3.02□□□□□ -1.93
PBX1-219ENST00000560641 HMCN1Q96RW7 5635 aa2.99□□□□□ -1.93
PBX1-219ENST00000560641 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
PBX1-219ENST00000560641 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
PBX1-219ENST00000560641 KRTAP9-9Q9BYP9 154 aa2.72□□□□□ -1.97
PBX1-219ENST00000560641 KRTAP5-7Q6L8G8 165 aa2.68□□□□□ -1.98
PBX1-219ENST00000560641 KRTAP5-8O75690 187 aa2.66□□□□□ -1.98
PBX1-219ENST00000560641 AHNAK2Q8IVF2 5795 aa2.61□□□□□ -1.99
PBX1-219ENST00000560641 KRTAP5-11Q6L8G4 156 aa2.6□□□□□ -1.99
PBX1-219ENST00000560641 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
PBX1-219ENST00000560641 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
PBX1-219ENST00000560641 AHNAKQ09666 5890 aaKnown RBP2.44□□□□□ -2.02
PBX1-219ENST00000560641 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
PBX1-219ENST00000560641 KRTAP4-12Q9BQ66 201 aa2.29□□□□□ -2.04
PBX1-219ENST00000560641 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
PBX1-219ENST00000560641 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 53.5 ms