RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 KRTAP4-12Q9BQ66 201 aa2.19□□□□□ -2.06
CTDSPL2-206ENST00000559175 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
CTDSPL2-206ENST00000559175 MT1HP80294 61 aa2.15□□□□□ -2.07
CTDSPL2-206ENST00000559175 KRTAP4-9Q9BYQ8 210 aa2.14□□□□□ -2.07
CTDSPL2-206ENST00000559175 SPRR2GQ9BYE4 73 aa2.14□□□□□ -2.07
CTDSPL2-206ENST00000559175 KRTAP19-8Q3LI54 63 aa2.13□□□□□ -2.07
CTDSPL2-206ENST00000559175 KRTAP19-6Q3LI70 58 aa2.11□□□□□ -2.07
CTDSPL2-206ENST00000559175 KRTAP4-2Q9BYR5 136 aa2.11□□□□□ -2.07
CTDSPL2-206ENST00000559175 USH2AO75445 5202 aa2.11□□□□□ -2.07
CTDSPL2-206ENST00000559175 SSPOA2VEC9 5147 aa2.1□□□□□ -2.07
CTDSPL2-206ENST00000559175 KRTAP12-3P60328 96 aa2.08□□□□□ -2.08
CTDSPL2-206ENST00000559175 KRTAP10-5P60370 271 aa2.06□□□□□ -2.08
CTDSPL2-206ENST00000559175 KRTAP5-9P26371 169 aa2.04□□□□□ -2.08
CTDSPL2-206ENST00000559175 MT2AP02795 61 aa2□□□□□ -2.09
CTDSPL2-206ENST00000559175 MT1BP07438 61 aa1.96□□□□□ -2.1
CTDSPL2-206ENST00000559175 MT1FP04733 61 aa1.96□□□□□ -2.1
CTDSPL2-206ENST00000559175 KRTAP4-11Q9BYQ6 195 aa1.95□□□□□ -2.1
CTDSPL2-206ENST00000559175 MUC2Q02817 5179 aa1.94□□□□□ -2.1
CTDSPL2-206ENST00000559175 CRCT1Q9UGL9 99 aa1.93□□□□□ -2.1
CTDSPL2-206ENST00000559175 MT1XP80297 61 aa1.89□□□□□ -2.11
CTDSPL2-206ENST00000559175 LCE3AQ5TA76 89 aa1.88□□□□□ -2.11
CTDSPL2-206ENST00000559175 KRTAP8-1Q8IUC2 63 aa1.84□□□□□ -2.12
CTDSPL2-206ENST00000559175 KRTAP2-3P0C7H8 128 aa1.81□□□□□ -2.12
CTDSPL2-206ENST00000559175 KRTAP2-4Q9BYR9 128 aa1.81□□□□□ -2.12
CTDSPL2-206ENST00000559175 KRTAP2-1Q9BYU5 128 aa1.81□□□□□ -2.12
CTDSPL2-206ENST00000559175 OBSCNQ5VST9 7968 aa1.79□□□□□ -2.12
CTDSPL2-206ENST00000559175 SYNE1Q8NF91 8797 aaKnown RBP1.78□□□□□ -2.12
CTDSPL2-206ENST00000559175 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
CTDSPL2-206ENST00000559175 FCGBPQ9Y6R7 5405 aaPredicted RBP1.76□□□□□ -2.13
CTDSPL2-206ENST00000559175 PRM1P04553 51 aa1.76□□□□□ -2.13
CTDSPL2-206ENST00000559175 KRTAP5-4Q6L8H1 288 aa1.74□□□□□ -2.13
CTDSPL2-206ENST00000559175 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.74□□□□□ -2.13
CTDSPL2-206ENST00000559175 NEBP20929 6669 aa1.72□□□□□ -2.13
CTDSPL2-206ENST00000559175 KRTAP19-7Q3SYF9 63 aa1.72□□□□□ -2.13
CTDSPL2-206ENST00000559175 KRTAP9-6A8MVA2 160 aa1.7□□□□□ -2.14
CTDSPL2-206ENST00000559175 MT1EP04732 61 aa1.7□□□□□ -2.14
CTDSPL2-206ENST00000559175 KRTAP5-5Q701N2 237 aaPredicted RBP1.68□□□□□ -2.14
CTDSPL2-206ENST00000559175 KRTAP19-5Q3LI72 72 aa1.65□□□□□ -2.15
CTDSPL2-206ENST00000559175 MT1LQ93083 61 aa1.62□□□□□ -2.15
CTDSPL2-206ENST00000559175 MUC12Q9UKN1 5478 aa1.62□□□□□ -2.15
CTDSPL2-206ENST00000559175 KMT2DO14686 5537 aa1.61□□□□□ -2.15
CTDSPL2-206ENST00000559175 LCE1CQ5T751 118 aa1.59□□□□□ -2.16
CTDSPL2-206ENST00000559175 LCE1BQ5T7P3 118 aa1.59□□□□□ -2.16
CTDSPL2-206ENST00000559175 GPR98Q8WXG9 6306 aa1.58□□□□□ -2.16
CTDSPL2-206ENST00000559175 KRTAP5-2Q701N4 177 aa1.58□□□□□ -2.16
CTDSPL2-206ENST00000559175 FSIP2Q5CZC0 6907 aa1.58□□□□□ -2.16
CTDSPL2-206ENST00000559175 MT1GP13640 62 aa1.56□□□□□ -2.16
CTDSPL2-206ENST00000559175 KRTAP19-3Q7Z4W3 81 aa1.55□□□□□ -2.16
CTDSPL2-206ENST00000559175 DSTQ03001 7570 aaKnown RBP1.55□□□□□ -2.16
CTDSPL2-206ENST00000559175 KRTAP20-1Q3LI63 56 aa1.55□□□□□ -2.16
CTDSPL2-206ENST00000559175 KRTAP5-7Q6L8G8 165 aa1.55□□□□□ -2.16
CTDSPL2-206ENST00000559175 MT1MQ8N339 61 aa1.54□□□□□ -2.16
CTDSPL2-206ENST00000559175 MACF1Q9UPN3 7388 aaKnown RBP1.53□□□□□ -2.16
CTDSPL2-206ENST00000559175 KRTAP5-10Q6L8G5 202 aa1.49□□□□□ -2.17
CTDSPL2-206ENST00000559175 SPRR2FQ96RM1 72 aa1.48□□□□□ -2.17
CTDSPL2-206ENST00000559175 MT1AP04731 61 aa1.47□□□□□ -2.17
CTDSPL2-206ENST00000559175 KRTAP5-8O75690 187 aa1.45□□□□□ -2.18
CTDSPL2-206ENST00000559175 KRTAP6-2Q3LI66 62 aa1.43□□□□□ -2.18
CTDSPL2-206ENST00000559175 MDN1Q9NU22 5596 aa1.42□□□□□ -2.18
CTDSPL2-206ENST00000559175 SPRR2EP22531 72 aa1.37□□□□□ -2.19
CTDSPL2-206ENST00000559175 SPRR2BP35325 72 aa1.37□□□□□ -2.19
CTDSPL2-206ENST00000559175 SPRR2AP35326 72 aa1.37□□□□□ -2.19
CTDSPL2-206ENST00000559175 SPRR2DP22532 72 aa1.36□□□□□ -2.19
CTDSPL2-206ENST00000559175 KRTAP4-4Q9BYR3 166 aa1.36□□□□□ -2.19
CTDSPL2-206ENST00000559175 AHNAK2Q8IVF2 5795 aa1.35□□□□□ -2.19
CTDSPL2-206ENST00000559175 KRTAP4-3Q9BYR4 195 aa1.35□□□□□ -2.19
CTDSPL2-206ENST00000559175 KRTAP20-2Q3LI61 65 aa1.35□□□□□ -2.19
CTDSPL2-206ENST00000559175 KRTAP5-1Q6L8H4 278 aa1.34□□□□□ -2.19
CTDSPL2-206ENST00000559175 SYNE2Q8WXH0 6885 aaKnown RBP1.34□□□□□ -2.2
CTDSPL2-206ENST00000559175 AHNAKQ09666 5890 aaKnown RBP1.28□□□□□ -2.2
CTDSPL2-206ENST00000559175 KRTAP6-1Q3LI64 71 aa1.28□□□□□ -2.2
CTDSPL2-206ENST00000559175 KRTAP5-11Q6L8G4 156 aa1.28□□□□□ -2.2
CTDSPL2-206ENST00000559175 MUC5ACP98088 5654 aa1.15□□□□□ -2.23
CTDSPL2-206ENST00000559175 MT4P47944 62 aa1.14□□□□□ -2.23
CTDSPL2-206ENST00000559175 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
CTDSPL2-206ENST00000559175 KRTAP21-2Q3LI59 83 aa0.99□□□□□ -2.25
CTDSPL2-206ENST00000559175 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
CTDSPL2-206ENST00000559175 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 94.3 ms