RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 SPRR5A0A1B0GTR4 108 aa2.4□□□□□ -2.03
CASC4-207ENST00000559037 MT2AP02795 61 aa2.4□□□□□ -2.03
CASC4-207ENST00000559037 KRTAP10-10P60014 251 aa2.39□□□□□ -2.03
CASC4-207ENST00000559037 CSAG1Q6PB30 78 aa2.39□□□□□ -2.03
CASC4-207ENST00000559037 MT1FP04733 61 aa2.38□□□□□ -2.03
CASC4-207ENST00000559037 H0YAA0 97 aa2.35□□□□□ -2.03
CASC4-207ENST00000559037 SSPOA2VEC9 5147 aa2.34□□□□□ -2.04
CASC4-207ENST00000559037 M0QZ58 72 aa2.33□□□□□ -2.04
CASC4-207ENST00000559037 USH2AO75445 5202 aa2.33□□□□□ -2.04
CASC4-207ENST00000559037 ADM2Q7Z4H4 148 aa2.31□□□□□ -2.04
CASC4-207ENST00000559037 KRTAP19-6Q3LI70 58 aa2.3□□□□□ -2.04
CASC4-207ENST00000559037 FCGBPQ9Y6R7 5405 aaPredicted RBP2.28□□□□□ -2.04
CASC4-207ENST00000559037 R4GN34 69 aa2.27□□□□□ -2.05
CASC4-207ENST00000559037 A0A0D9SG42 100 aa2.26□□□□□ -2.05
CASC4-207ENST00000559037 P0C880 135 aa2.25□□□□□ -2.05
CASC4-207ENST00000559037 ROMO1P60602 79 aa2.25□□□□□ -2.05
CASC4-207ENST00000559037 CRIPTQ9P021 101 aa2.25□□□□□ -2.05
CASC4-207ENST00000559037 KRTAP25-1Q3LHN0 102 aa2.23□□□□□ -2.05
CASC4-207ENST00000559037 KRTAP13-4Q3LI77 160 aa2.22□□□□□ -2.05
CASC4-207ENST00000559037 SPINT4Q6UDR6 99 aa2.22□□□□□ -2.05
CASC4-207ENST00000559037 SYNE2Q8WXH0 6885 aaKnown RBP2.21□□□□□ -2.06
CASC4-207ENST00000559037 SPRR2GQ9BYE4 73 aa2.2□□□□□ -2.06
CASC4-207ENST00000559037 MT1BP07438 61 aa2.19□□□□□ -2.06
CASC4-207ENST00000559037 KRTAP12-1P59990 96 aa2.19□□□□□ -2.06
CASC4-207ENST00000559037 KRTAP19-8Q3LI54 63 aa2.19□□□□□ -2.06
CASC4-207ENST00000559037 KRTAP6-3Q3LI67 103 aa2.19□□□□□ -2.06
CASC4-207ENST00000559037 MACF1Q9UPN3 7388 aaKnown RBP2.18□□□□□ -2.06
CASC4-207ENST00000559037 KRTAP20-1Q3LI63 56 aa2.15□□□□□ -2.07
CASC4-207ENST00000559037 PLAC4Q8WY50 150 aa2.11□□□□□ -2.07
CASC4-207ENST00000559037 KRTAP5-7Q6L8G8 165 aa2.08□□□□□ -2.08
CASC4-207ENST00000559037 TNP1P09430 55 aa2.07□□□□□ -2.08
CASC4-207ENST00000559037 MT1XP80297 61 aa2.05□□□□□ -2.08
CASC4-207ENST00000559037 C10orf95Q9H7T3 257 aa2.04□□□□□ -2.08
CASC4-207ENST00000559037 NEBP20929 6669 aa2.03□□□□□ -2.08
CASC4-207ENST00000559037 MUC12Q9UKN1 5478 aa2.03□□□□□ -2.08
CASC4-207ENST00000559037 KRTAP2-3P0C7H8 128 aa2.03□□□□□ -2.08
CASC4-207ENST00000559037 KRTAP2-4Q9BYR9 128 aa2.03□□□□□ -2.08
CASC4-207ENST00000559037 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
CASC4-207ENST00000559037 LUZP6Q538Z0 58 aa2.02□□□□□ -2.09
CASC4-207ENST00000559037 PRO2289Q9P1D8 64 aa2.01□□□□□ -2.09
CASC4-207ENST00000559037 KMT2DO14686 5537 aa2□□□□□ -2.09
CASC4-207ENST00000559037 SPRR2FQ96RM1 72 aa1.98□□□□□ -2.09
CASC4-207ENST00000559037 KRTAP8-1Q8IUC2 63 aa1.97□□□□□ -2.09
CASC4-207ENST00000559037 SPRR2EP22531 72 aa1.95□□□□□ -2.1
CASC4-207ENST00000559037 SPRR2BP35325 72 aa1.95□□□□□ -2.1
CASC4-207ENST00000559037 SPRR2AP35326 72 aa1.95□□□□□ -2.1
CASC4-207ENST00000559037 KRTAP2-1Q9BYU5 128 aa1.94□□□□□ -2.1
CASC4-207ENST00000559037 MDN1Q9NU22 5596 aa1.9□□□□□ -2.11
CASC4-207ENST00000559037 HMCN1Q96RW7 5635 aa1.9□□□□□ -2.11
CASC4-207ENST00000559037 SPRR2DP22532 72 aa1.89□□□□□ -2.11
CASC4-207ENST00000559037 KRTAP12-4P60329 112 aa1.87□□□□□ -2.11
CASC4-207ENST00000559037 KRTAP19-7Q3SYF9 63 aa1.84□□□□□ -2.11
CASC4-207ENST00000559037 KRTAP12-3P60328 96 aa1.83□□□□□ -2.12
CASC4-207ENST00000559037 INE1O15225 51 aa1.82□□□□□ -2.12
CASC4-207ENST00000559037 MT1EP04732 61 aa1.81□□□□□ -2.12
CASC4-207ENST00000559037 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
CASC4-207ENST00000559037 KRTAP19-3Q7Z4W3 81 aa1.79□□□□□ -2.12
CASC4-207ENST00000559037 MT1GP13640 62 aa1.78□□□□□ -2.12
CASC4-207ENST00000559037 KRTAP19-5Q3LI72 72 aa1.76□□□□□ -2.13
CASC4-207ENST00000559037 DSTQ03001 7570 aaKnown RBP1.74□□□□□ -2.13
CASC4-207ENST00000559037 MT1MQ8N339 61 aa1.73□□□□□ -2.13
CASC4-207ENST00000559037 MT1LQ93083 61 aa1.73□□□□□ -2.13
CASC4-207ENST00000559037 GPR98Q8WXG9 6306 aa1.73□□□□□ -2.13
CASC4-207ENST00000559037 KRTAP5-10Q6L8G5 202 aa1.68□□□□□ -2.14
CASC4-207ENST00000559037 MT4P47944 62 aa1.66□□□□□ -2.14
CASC4-207ENST00000559037 SYNE1Q8NF91 8797 aaKnown RBP1.58□□□□□ -2.16
CASC4-207ENST00000559037 KRTAP20-2Q3LI61 65 aa1.56□□□□□ -2.16
CASC4-207ENST00000559037 AHNAK2Q8IVF2 5795 aa1.55□□□□□ -2.16
CASC4-207ENST00000559037 MT1AP04731 61 aa1.47□□□□□ -2.17
CASC4-207ENST00000559037 KRTAP6-1Q3LI64 71 aa1.47□□□□□ -2.17
CASC4-207ENST00000559037 KRTAP6-2Q3LI66 62 aa1.4□□□□□ -2.19
CASC4-207ENST00000559037 MUC5ACP98088 5654 aa1.31□□□□□ -2.2
CASC4-207ENST00000559037 AHNAKQ09666 5890 aaKnown RBP1.29□□□□□ -2.2
CASC4-207ENST00000559037 MUC5BQ9HC84 5762 aaPredicted RBP1.25□□□□□ -2.21
CASC4-207ENST00000559037 PRM1P04553 51 aa1.15□□□□□ -2.23
CASC4-207ENST00000559037 PHGR1C9JFL3 82 aa1.01□□□□□ -2.25
CASC4-207ENST00000559037 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
CASC4-207ENST00000559037 KRTAP21-1Q3LI58 79 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 41.7 ms