RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 KRTAP2-3P0C7H8 128 aa3.01□□□□□ -1.93
SPG11-213ENST00000558988 DMAC1Q96GE9 116 aa3.01□□□□□ -1.93
SPG11-213ENST00000558988 KRTAP2-4Q9BYR9 128 aa3.01□□□□□ -1.93
SPG11-213ENST00000558988 MUC12Q9UKN1 5478 aa3□□□□□ -1.93
SPG11-213ENST00000558988 SPANXA2-OT1Q8N9U9 137 aa3□□□□□ -1.93
SPG11-213ENST00000558988 KMT2DO14686 5537 aa3□□□□□ -1.93
SPG11-213ENST00000558988 H3BPC8 53 aa2.99□□□□□ -1.93
SPG11-213ENST00000558988 MT-ATP8P03928 68 aa2.98□□□□□ -1.93
SPG11-213ENST00000558988 J3QR89 54 aa2.97□□□□□ -1.93
SPG11-213ENST00000558988 SPRR2DP22532 72 aa2.95□□□□□ -1.94
SPG11-213ENST00000558988 A6NED7 52 aa2.94□□□□□ -1.94
SPG11-213ENST00000558988 CHKB-CPT1BH3BT56 60 aa2.94□□□□□ -1.94
SPG11-213ENST00000558988 ACYP2P14621 99 aa2.94□□□□□ -1.94
SPG11-213ENST00000558988 TRAV7A0A075B6U4 112 aa2.93□□□□□ -1.94
SPG11-213ENST00000558988 SPTSSBQ8NFR3 76 aa2.93□□□□□ -1.94
SPG11-213ENST00000558988 MDN1Q9NU22 5596 aa2.92□□□□□ -1.94
SPG11-213ENST00000558988 KRTAP2-1Q9BYU5 128 aa2.91□□□□□ -1.94
SPG11-213ENST00000558988 SMIM20Q8N5G0 67 aa2.9□□□□□ -1.95
SPG11-213ENST00000558988 SNURFQ9Y675 71 aa2.89□□□□□ -1.95
SPG11-213ENST00000558988 KRTAP13-4Q3LI77 160 aa2.83□□□□□ -1.96
SPG11-213ENST00000558988 HMCN1Q96RW7 5635 aa2.82□□□□□ -1.96
SPG11-213ENST00000558988 K7ERU9 68 aa2.82□□□□□ -1.96
SPG11-213ENST00000558988 A0A0D9SG42 100 aa2.81□□□□□ -1.96
SPG11-213ENST00000558988 SPINT4Q6UDR6 99 aa2.81□□□□□ -1.96
SPG11-213ENST00000558988 A0A1B0GU33 70 aa2.77□□□□□ -1.97
SPG11-213ENST00000558988 COA5Q86WW8 74 aa2.76□□□□□ -1.97
SPG11-213ENST00000558988 SERP2Q8N6R1 65 aa2.76□□□□□ -1.97
SPG11-213ENST00000558988 SPATA8Q6RVD6 105 aa2.75□□□□□ -1.97
SPG11-213ENST00000558988 SERP1Q9Y6X1 66 aa2.75□□□□□ -1.97
SPG11-213ENST00000558988 KRTAP25-1Q3LHN0 102 aa2.74□□□□□ -1.97
SPG11-213ENST00000558988 MT1EP04732 61 aa2.72□□□□□ -1.97
SPG11-213ENST00000558988 KRTAP19-7Q3SYF9 63 aa2.72□□□□□ -1.97
SPG11-213ENST00000558988 KTN1-AS1Q86SY8 53 aa2.72□□□□□ -1.97
SPG11-213ENST00000558988 KRTAP19-3Q7Z4W3 81 aa2.71□□□□□ -1.98
SPG11-213ENST00000558988 KRTAP19-5Q3LI72 72 aa2.68□□□□□ -1.98
SPG11-213ENST00000558988 KRTAP12-1P59990 96 aa2.67□□□□□ -1.98
SPG11-213ENST00000558988 CYSTM1Q9H1C7 97 aa2.67□□□□□ -1.98
SPG11-213ENST00000558988 COX7CP15954 63 aa2.65□□□□□ -1.99
SPG11-213ENST00000558988 A0A1B0GU69 56 aa2.63□□□□□ -1.99
SPG11-213ENST00000558988 DSTQ03001 7570 aaKnown RBP2.62□□□□□ -1.99
SPG11-213ENST00000558988 H7BZZ5 65 aa2.62□□□□□ -1.99
SPG11-213ENST00000558988 MT4P47944 62 aa2.62□□□□□ -1.99
SPG11-213ENST00000558988 MT1GP13640 62 aa2.61□□□□□ -1.99
SPG11-213ENST00000558988 RPS28P62857 69 aaKnown RBP2.61□□□□□ -1.99
SPG11-213ENST00000558988 MT1MQ8N339 61 aa2.6□□□□□ -1.99
SPG11-213ENST00000558988 MT1LQ93083 61 aa2.59□□□□□ -1.99
SPG11-213ENST00000558988 C10orf95Q9H7T3 257 aa2.59□□□□□ -1.99
SPG11-213ENST00000558988 TNP1P09430 55 aa2.57□□□□□ -2
SPG11-213ENST00000558988 TMEM258P61165 79 aa2.56□□□□□ -2
SPG11-213ENST00000558988 GPR98Q8WXG9 6306 aa2.55□□□□□ -2
SPG11-213ENST00000558988 PRR15LQ9BU68 103 aa2.52□□□□□ -2.01
SPG11-213ENST00000558988 CCDC179H3BU77 68 aa2.51□□□□□ -2.01
SPG11-213ENST00000558988 KRTAP12-3P60328 96 aa2.47□□□□□ -2.01
SPG11-213ENST00000558988 BRK1Q8WUW1 75 aa2.47□□□□□ -2.01
SPG11-213ENST00000558988 ATP5EP56381 51 aaPredicted RBP2.45□□□□□ -2.02
SPG11-213ENST00000558988 LINC01558Q9Y6Z2 57 aa2.45□□□□□ -2.02
SPG11-213ENST00000558988 SPRR5A0A1B0GTR4 108 aa2.42□□□□□ -2.02
SPG11-213ENST00000558988 UQCR11O14957 56 aa2.42□□□□□ -2.02
SPG11-213ENST00000558988 KRTAP5-10Q6L8G5 202 aa2.42□□□□□ -2.02
SPG11-213ENST00000558988 ROMO1P60602 79 aa2.4□□□□□ -2.03
SPG11-213ENST00000558988 MIR22HGQ0VDD5 57 aa2.38□□□□□ -2.03
SPG11-213ENST00000558988 KRTAP20-2Q3LI61 65 aa2.37□□□□□ -2.03
SPG11-213ENST00000558988 AHNAK2Q8IVF2 5795 aa2.36□□□□□ -2.03
SPG11-213ENST00000558988 KRTAP12-4P60329 112 aa2.35□□□□□ -2.03
SPG11-213ENST00000558988 Q1T7F1 81 aa2.34□□□□□ -2.03
SPG11-213ENST00000558988 CDC42SE1Q9NRR8 79 aa2.22□□□□□ -2.05
SPG11-213ENST00000558988 KRTAP6-1Q3LI64 71 aa2.21□□□□□ -2.06
SPG11-213ENST00000558988 MT1AP04731 61 aa2.2□□□□□ -2.06
SPG11-213ENST00000558988 SYNE1Q8NF91 8797 aaKnown RBP2.15□□□□□ -2.07
SPG11-213ENST00000558988 KRTAP6-2Q3LI66 62 aa2.13□□□□□ -2.07
SPG11-213ENST00000558988 INE1O15225 51 aa2.09□□□□□ -2.07
SPG11-213ENST00000558988 MUC5ACP98088 5654 aa1.97□□□□□ -2.09
SPG11-213ENST00000558988 AHNAKQ09666 5890 aaKnown RBP1.93□□□□□ -2.1
SPG11-213ENST00000558988 MUC5BQ9HC84 5762 aaPredicted RBP1.9□□□□□ -2.1
SPG11-213ENST00000558988 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
SPG11-213ENST00000558988 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
SPG11-213ENST00000558988 PRM1P04553 51 aa1.13□□□□□ -2.23
SPG11-213ENST00000558988 KRTAP21-1Q3LI58 79 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 131.4 ms