RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 KRTAP19-3Q7Z4W3 81 aa3.62□□□□□ -1.83
SPG11-212ENST00000558790 MT1EP04732 61 aa3.61□□□□□ -1.83
SPG11-212ENST00000558790 CYSTM1Q9H1C7 97 aa3.56□□□□□ -1.84
SPG11-212ENST00000558790 LINC00643Q86TS7 51 aa3.55□□□□□ -1.84
SPG11-212ENST00000558790 TRAV7A0A075B6U4 112 aa3.54□□□□□ -1.84
SPG11-212ENST00000558790 H3BPC8 53 aa3.54□□□□□ -1.84
SPG11-212ENST00000558790 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
SPG11-212ENST00000558790 KRTAP13-4Q3LI77 160 aa3.5□□□□□ -1.85
SPG11-212ENST00000558790 MT1GP13640 62 aa3.48□□□□□ -1.85
SPG11-212ENST00000558790 KRTAP5-5Q701N2 237 aaPredicted RBP3.48□□□□□ -1.85
SPG11-212ENST00000558790 SPTSSBQ8NFR3 76 aa3.48□□□□□ -1.85
SPG11-212ENST00000558790 AHNAKQ09666 5890 aaKnown RBP3.47□□□□□ -1.85
SPG11-212ENST00000558790 ACYP2P14621 99 aa3.47□□□□□ -1.85
SPG11-212ENST00000558790 KRTAP19-5Q3LI72 72 aa3.46□□□□□ -1.86
SPG11-212ENST00000558790 MT1MQ8N339 61 aa3.46□□□□□ -1.86
SPG11-212ENST00000558790 PP632Q6XCG6 107 aa3.45□□□□□ -1.86
SPG11-212ENST00000558790 ANAPC13Q9BS18 74 aa3.44□□□□□ -1.86
SPG11-212ENST00000558790 A0A0D9SG42 100 aa3.43□□□□□ -1.86
SPG11-212ENST00000558790 CHKB-CPT1BH3BT56 60 aa3.42□□□□□ -1.86
SPG11-212ENST00000558790 KRTAP4-3Q9BYR4 195 aa3.41□□□□□ -1.86
SPG11-212ENST00000558790 MT1LQ93083 61 aa3.4□□□□□ -1.87
SPG11-212ENST00000558790 MUC5ACP98088 5654 aa3.4□□□□□ -1.87
SPG11-212ENST00000558790 MUC5BQ9HC84 5762 aaPredicted RBP3.39□□□□□ -1.87
SPG11-212ENST00000558790 CCDC179H3BU77 68 aa3.33□□□□□ -1.88
SPG11-212ENST00000558790 COX7CP15954 63 aa3.33□□□□□ -1.88
SPG11-212ENST00000558790 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
SPG11-212ENST00000558790 SMIM20Q8N5G0 67 aa3.32□□□□□ -1.88
SPG11-212ENST00000558790 SERP2Q8N6R1 65 aa3.31□□□□□ -1.88
SPG11-212ENST00000558790 SPINT4Q6UDR6 99 aa3.29□□□□□ -1.88
SPG11-212ENST00000558790 SPATA8Q6RVD6 105 aa3.28□□□□□ -1.88
SPG11-212ENST00000558790 C10orf95Q9H7T3 257 aa3.28□□□□□ -1.88
SPG11-212ENST00000558790 KRTAP12-1P59990 96 aa3.27□□□□□ -1.89
SPG11-212ENST00000558790 RPS28P62857 69 aaKnown RBP3.27□□□□□ -1.89
SPG11-212ENST00000558790 SNURFQ9Y675 71 aa3.27□□□□□ -1.89
SPG11-212ENST00000558790 TMEM258P61165 79 aa3.26□□□□□ -1.89
SPG11-212ENST00000558790 SPANXA2-OT1Q8N9U9 137 aa3.24□□□□□ -1.89
SPG11-212ENST00000558790 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
SPG11-212ENST00000558790 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
SPG11-212ENST00000558790 ATP5EP56381 51 aaPredicted RBP3.2□□□□□ -1.9
SPG11-212ENST00000558790 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
SPG11-212ENST00000558790 COA5Q86WW8 74 aa3.19□□□□□ -1.9
SPG11-212ENST00000558790 SERP1Q9Y6X1 66 aa3.19□□□□□ -1.9
SPG11-212ENST00000558790 A0A1B0GU33 70 aa3.18□□□□□ -1.9
SPG11-212ENST00000558790 SYNE1Q8NF91 8797 aaKnown RBP3.16□□□□□ -1.9
SPG11-212ENST00000558790 SMIM26A0A096LP01 95 aa3.16□□□□□ -1.9
SPG11-212ENST00000558790 H7BZZ5 65 aa3.16□□□□□ -1.9
SPG11-212ENST00000558790 TNP1P09430 55 aa3.15□□□□□ -1.91
SPG11-212ENST00000558790 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
SPG11-212ENST00000558790 KRTAP12-3P60328 96 aa3.12□□□□□ -1.91
SPG11-212ENST00000558790 V9GYY9 64 aa3.03□□□□□ -1.92
SPG11-212ENST00000558790 A0A1B0GU69 56 aa3.01□□□□□ -1.93
SPG11-212ENST00000558790 Q1T7F1 81 aa3.01□□□□□ -1.93
SPG11-212ENST00000558790 PRO0628Q9UI54 55 aa3□□□□□ -1.93
SPG11-212ENST00000558790 KRTAP5-2Q701N4 177 aa2.99□□□□□ -1.93
SPG11-212ENST00000558790 LUZP6Q538Z0 58 aa2.96□□□□□ -1.94
SPG11-212ENST00000558790 BRK1Q8WUW1 75 aa2.92□□□□□ -1.94
SPG11-212ENST00000558790 KRTAP6-1Q3LI64 71 aa2.9□□□□□ -1.95
SPG11-212ENST00000558790 PRR15LQ9BU68 103 aa2.9□□□□□ -1.95
SPG11-212ENST00000558790 LINC01558Q9Y6Z2 57 aa2.89□□□□□ -1.95
SPG11-212ENST00000558790 MT1AP04731 61 aa2.88□□□□□ -1.95
SPG11-212ENST00000558790 PSPHP1O15172 72 aa2.87□□□□□ -1.95
SPG11-212ENST00000558790 KRTAP25-1Q3LHN0 102 aa2.84□□□□□ -1.95
SPG11-212ENST00000558790 A6NED7 52 aa2.82□□□□□ -1.96
SPG11-212ENST00000558790 CDC42SE1Q9NRR8 79 aa2.82□□□□□ -1.96
SPG11-212ENST00000558790 PMAIP1Q13794 54 aa2.81□□□□□ -1.96
SPG11-212ENST00000558790 KRTAP6-2Q3LI66 62 aa2.81□□□□□ -1.96
SPG11-212ENST00000558790 UQCR11O14957 56 aa2.79□□□□□ -1.96
SPG11-212ENST00000558790 MIR22HGQ0VDD5 57 aa2.74□□□□□ -1.97
SPG11-212ENST00000558790 KTN1-AS1Q86SY8 53 aa2.74□□□□□ -1.97
SPG11-212ENST00000558790 K7ERS5 55 aa2.7□□□□□ -1.98
SPG11-212ENST00000558790 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
SPG11-212ENST00000558790 ROMO1P60602 79 aa2.49□□□□□ -2.01
SPG11-212ENST00000558790 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
SPG11-212ENST00000558790 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
SPG11-212ENST00000558790 INE1O15225 51 aa1.85□□□□□ -2.11
SPG11-212ENST00000558790 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
SPG11-212ENST00000558790 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
SPG11-212ENST00000558790 PRM1P04553 51 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 41.5 ms