RNA–Protein interactions for RNA: ENST00000557555.1

ITGA7-220, Transcript of integrin subunit alpha 7, humanhuman

TSL 5

Gene ITGA7, Length 817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-220ENST00000557555 MT1LQ93083 61 aa5.2□□□□□ -1.58
ITGA7-220ENST00000557555 MT1MQ8N339 61 aa5.16□□□□□ -1.58
ITGA7-220ENST00000557555 MIR22HGQ0VDD5 57 aa5.12□□□□□ -1.59
ITGA7-220ENST00000557555 KRTAP4-9Q9BYQ8 210 aa5.07□□□□□ -1.6
ITGA7-220ENST00000557555 V9GYY9 64 aa5.06□□□□□ -1.6
ITGA7-220ENST00000557555 KRTAP12-3P60328 96 aa5.05□□□□□ -1.6
ITGA7-220ENST00000557555 PSPHP1O15172 72 aa5.04□□□□□ -1.6
ITGA7-220ENST00000557555 Q1T7F1 81 aa5.03□□□□□ -1.6
ITGA7-220ENST00000557555 KRTAP4-3Q9BYR4 195 aa5.03□□□□□ -1.6
ITGA7-220ENST00000557555 K7ERS5 55 aa5.02□□□□□ -1.61
ITGA7-220ENST00000557555 KRTAP4-12Q9BQ66 201 aa5.02□□□□□ -1.61
ITGA7-220ENST00000557555 KRTAP25-1Q3LHN0 102 aa5.01□□□□□ -1.61
ITGA7-220ENST00000557555 LCE4AQ5TA78 99 aa4.98□□□□□ -1.61
ITGA7-220ENST00000557555 LCE1DQ5T752 114 aa4.96□□□□□ -1.62
ITGA7-220ENST00000557555 KRTAP4-7Q9BYR0 210 aa4.94□□□□□ -1.62
ITGA7-220ENST00000557555 H3BS24 57 aa4.91□□□□□ -1.62
ITGA7-220ENST00000557555 MT4P47944 62 aa4.91□□□□□ -1.62
ITGA7-220ENST00000557555 GPR98Q8WXG9 6306 aa4.91□□□□□ -1.62
ITGA7-220ENST00000557555 KRTAP5-4Q6L8H1 288 aa4.9□□□□□ -1.63
ITGA7-220ENST00000557555 HMCN1Q96RW7 5635 aa4.88□□□□□ -1.63
ITGA7-220ENST00000557555 A6NED7 52 aa4.87□□□□□ -1.63
ITGA7-220ENST00000557555 KRTAP9-9Q9BYP9 154 aa4.85□□□□□ -1.63
ITGA7-220ENST00000557555 KRTAP9-4Q9BYQ2 154 aa4.85□□□□□ -1.63
ITGA7-220ENST00000557555 KRTAP23-1A1A580 65 aa4.83□□□□□ -1.64
ITGA7-220ENST00000557555 RPS28P62857 69 aaKnown RBP4.79□□□□□ -1.64
ITGA7-220ENST00000557555 KRTAP19-4Q3LI73 84 aa4.77□□□□□ -1.65
ITGA7-220ENST00000557555 CDC42SE1Q9NRR8 79 aa4.76□□□□□ -1.65
ITGA7-220ENST00000557555 KRTAP15-1Q3LI76 137 aa4.73□□□□□ -1.65
ITGA7-220ENST00000557555 KRTAP5-5Q701N2 237 aaPredicted RBP4.73□□□□□ -1.65
ITGA7-220ENST00000557555 PCP4P48539 62 aa4.72□□□□□ -1.65
ITGA7-220ENST00000557555 AHNAK2Q8IVF2 5795 aa4.68□□□□□ -1.66
ITGA7-220ENST00000557555 ROMO1P60602 79 aa4.68□□□□□ -1.66
ITGA7-220ENST00000557555 LCE3CQ5T5A8 94 aa4.66□□□□□ -1.66
ITGA7-220ENST00000557555 KRTAP20-2Q3LI61 65 aa4.62□□□□□ -1.67
ITGA7-220ENST00000557555 SPRR5A0A1B0GTR4 108 aa4.61□□□□□ -1.67
ITGA7-220ENST00000557555 KRTAP12-4P60329 112 aa4.6□□□□□ -1.67
ITGA7-220ENST00000557555 KRTAP5-10Q6L8G5 202 aa4.6□□□□□ -1.67
ITGA7-220ENST00000557555 SYNE1Q8NF91 8797 aaKnown RBP4.52□□□□□ -1.69
ITGA7-220ENST00000557555 KRTAP5-3Q6L8H2 238 aa4.5□□□□□ -1.69
ITGA7-220ENST00000557555 MT1AP04731 61 aa4.42□□□□□ -1.7
ITGA7-220ENST00000557555 KRTAP5-7Q6L8G8 165 aa4.41□□□□□ -1.7
ITGA7-220ENST00000557555 KRTAP9-6A8MVA2 160 aa4.39□□□□□ -1.71
ITGA7-220ENST00000557555 KRTAP6-1Q3LI64 71 aa4.39□□□□□ -1.71
ITGA7-220ENST00000557555 KRTAP4-2Q9BYR5 136 aa4.37□□□□□ -1.71
ITGA7-220ENST00000557555 KRTAP4-11Q9BYQ6 195 aa4.35□□□□□ -1.71
ITGA7-220ENST00000557555 KRTAP5-2Q701N4 177 aa4.29□□□□□ -1.72
ITGA7-220ENST00000557555 KRTAP6-2Q3LI66 62 aa4.19□□□□□ -1.74
ITGA7-220ENST00000557555 BRK1Q8WUW1 75 aa4.19□□□□□ -1.74
ITGA7-220ENST00000557555 A0A0A0MQY5 61 aa4.08□□□□□ -1.76
ITGA7-220ENST00000557555 KRTAP5-8O75690 187 aa4.06□□□□□ -1.76
ITGA7-220ENST00000557555 MT3P25713 68 aa4.04□□□□□ -1.76
ITGA7-220ENST00000557555 OBSCNQ5VST9 7968 aa3.98□□□□□ -1.77
ITGA7-220ENST00000557555 PMAIP1Q13794 54 aa3.94□□□□□ -1.78
ITGA7-220ENST00000557555 MUC5ACP98088 5654 aa3.87□□□□□ -1.79
ITGA7-220ENST00000557555 AHNAKQ09666 5890 aaKnown RBP3.87□□□□□ -1.79
ITGA7-220ENST00000557555 KRTAP5-1Q6L8H4 278 aa3.85□□□□□ -1.79
ITGA7-220ENST00000557555 MUC5BQ9HC84 5762 aaPredicted RBP3.83□□□□□ -1.8
ITGA7-220ENST00000557555 PRAC1Q96KF2 57 aa3.8□□□□□ -1.8
ITGA7-220ENST00000557555 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
ITGA7-220ENST00000557555 PRO0628Q9UI54 55 aa3.64□□□□□ -1.83
ITGA7-220ENST00000557555 KTN1-AS1Q86SY8 53 aa3.49□□□□□ -1.85
ITGA7-220ENST00000557555 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
ITGA7-220ENST00000557555 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
ITGA7-220ENST00000557555 LCE3DQ9BYE3 92 aa3.36□□□□□ -1.87
ITGA7-220ENST00000557555 LUZP6Q538Z0 58 aa3.21□□□□□ -1.9
ITGA7-220ENST00000557555 LCE3EQ5T5B0 92 aa3.17□□□□□ -1.9
ITGA7-220ENST00000557555 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
ITGA7-220ENST00000557555 KRTAP5-11Q6L8G4 156 aa3.11□□□□□ -1.91
ITGA7-220ENST00000557555 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
ITGA7-220ENST00000557555 NDUFAF8A1L188 74 aa2.97□□□□□ -1.93
ITGA7-220ENST00000557555 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
ITGA7-220ENST00000557555 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
ITGA7-220ENST00000557555 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
ITGA7-220ENST00000557555 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
ITGA7-220ENST00000557555 PRM1P04553 51 aa2.39□□□□□ -2.03
ITGA7-220ENST00000557555 INE1O15225 51 aa2.05□□□□□ -2.08
ITGA7-220ENST00000557555 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
ITGA7-220ENST00000557555 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 63.7 ms