RNA–Protein interactions for RNA: ENST00000556814.5

FCF1-208, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-208ENST00000556814 KMT2AQ03164 3969 aa0.7□□□□□ -2.3
FCF1-208ENST00000556814 PLECQ15149 4684 aaKnown RBP0.7□□□□□ -2.3
FCF1-208ENST00000556814 M0R2T5 61 aa0.7□□□□□ -2.3
FCF1-208ENST00000556814 HERC1Q15751 4861 aa0.7□□□□□ -2.3
FCF1-208ENST00000556814 APOBP04114 4563 aaKnown RBP0.69□□□□□ -2.3
FCF1-208ENST00000556814 KIAA1109Q2LD37 5005 aa0.69□□□□□ -2.3
FCF1-208ENST00000556814 FAT2Q9NYQ8 4349 aa0.69□□□□□ -2.3
FCF1-208ENST00000556814 PKD1P98161 4303 aa0.69□□□□□ -2.3
FCF1-208ENST00000556814 HSPG2P98160 4391 aa0.68□□□□□ -2.3
FCF1-208ENST00000556814 KRTAP2-3P0C7H8 128 aa0.68□□□□□ -2.3
FCF1-208ENST00000556814 KRTAP2-4Q9BYR9 128 aa0.68□□□□□ -2.3
FCF1-208ENST00000556814 KRTAP2-1Q9BYU5 128 aa0.68□□□□□ -2.3
FCF1-208ENST00000556814 DYNC1H1Q14204 4646 aaKnown RBP0.67□□□□□ -2.3
FCF1-208ENST00000556814 SRRM2Q9UQ35 2752 aaKnown RBP0.67□□□□□ -2.3
FCF1-208ENST00000556814 VPS13BQ7Z7G8 4022 aa0.66□□□□□ -2.3
FCF1-208ENST00000556814 ABCA13Q86UQ4 5058 aa0.66□□□□□ -2.3
FCF1-208ENST00000556814 PKHD1L1Q86WI1 4243 aa0.65□□□□□ -2.31
FCF1-208ENST00000556814 LRP1BQ9NZR2 4599 aa0.65□□□□□ -2.31
FCF1-208ENST00000556814 LRP1Q07954 4544 aaKnown RBP0.65□□□□□ -2.31
FCF1-208ENST00000556814 HMCN2Q8NDA2 5059 aa0.64□□□□□ -2.31
FCF1-208ENST00000556814 DNAH5Q8TE73 4624 aa0.63□□□□□ -2.31
FCF1-208ENST00000556814 FAT1Q14517 4588 aa0.63□□□□□ -2.31
FCF1-208ENST00000556814 LRP2P98164 4655 aa0.62□□□□□ -2.31
FCF1-208ENST00000556814 FAT3Q8TDW7 4589 aa0.62□□□□□ -2.31
FCF1-208ENST00000556814 SMR3BP02814 79 aaPredicted RBP0.62□□□□□ -2.31
FCF1-208ENST00000556814 SPRR2GQ9BYE4 73 aa0.62□□□□□ -2.31
FCF1-208ENST00000556814 TNXBP22105 4242 aa0.61□□□□□ -2.31
FCF1-208ENST00000556814 UBR4Q5T4S7 5183 aa0.61□□□□□ -2.31
FCF1-208ENST00000556814 FLGP20930 4061 aaPredicted RBP0.6□□□□□ -2.31
FCF1-208ENST00000556814 RNF213Q63HN8 5207 aa0.59□□□□□ -2.32
FCF1-208ENST00000556814 KRTAP19-5Q3LI72 72 aa0.58□□□□□ -2.32
FCF1-208ENST00000556814 FAT4Q6V0I7 4981 aa0.58□□□□□ -2.32
FCF1-208ENST00000556814 MT1AP04731 61 aa0.57□□□□□ -2.32
FCF1-208ENST00000556814 MUC2Q02817 5179 aa0.57□□□□□ -2.32
FCF1-208ENST00000556814 LPAP08519 4548 aa0.56□□□□□ -2.32
FCF1-208ENST00000556814 MT1HL1P0DM35 61 aa0.56□□□□□ -2.32
FCF1-208ENST00000556814 KRTAP19-8Q3LI54 63 aa0.56□□□□□ -2.32
FCF1-208ENST00000556814 MDN1Q9NU22 5596 aa0.56□□□□□ -2.32
FCF1-208ENST00000556814 MUC17Q685J3 4493 aa0.55□□□□□ -2.32
FCF1-208ENST00000556814 MT1EP04732 61 aa0.55□□□□□ -2.32
FCF1-208ENST00000556814 PRM1P04553 51 aa0.54□□□□□ -2.32
FCF1-208ENST00000556814 KRTAP19-2Q3LHN2 52 aa0.54□□□□□ -2.32
FCF1-208ENST00000556814 MT1LQ93083 61 aa0.54□□□□□ -2.32
FCF1-208ENST00000556814 FSIP2Q5CZC0 6907 aa0.53□□□□□ -2.32
FCF1-208ENST00000556814 MT1XP80297 61 aa0.53□□□□□ -2.32
FCF1-208ENST00000556814 SPRR2AP35326 72 aa0.52□□□□□ -2.33
FCF1-208ENST00000556814 KRTAP21-1Q3LI58 79 aa0.52□□□□□ -2.33
FCF1-208ENST00000556814 SSPOA2VEC9 5147 aa0.52□□□□□ -2.33
FCF1-208ENST00000556814 SPRR2BP35325 72 aa0.51□□□□□ -2.33
FCF1-208ENST00000556814 SPRR2FQ96RM1 72 aa0.5□□□□□ -2.33
FCF1-208ENST00000556814 AHNAKQ09666 5890 aaKnown RBP0.5□□□□□ -2.33
FCF1-208ENST00000556814 MT1BP07438 61 aa0.49□□□□□ -2.33
FCF1-208ENST00000556814 SPRR2DP22532 72 aa0.49□□□□□ -2.33
FCF1-208ENST00000556814 MT1HP80294 61 aa0.49□□□□□ -2.33
FCF1-208ENST00000556814 MUC5BQ9HC84 5762 aaPredicted RBP0.49□□□□□ -2.33
FCF1-208ENST00000556814 KRTAP19-6Q3LI70 58 aa0.48□□□□□ -2.33
FCF1-208ENST00000556814 USH2AO75445 5202 aa0.47□□□□□ -2.33
FCF1-208ENST00000556814 SPRR2EP22531 72 aa0.47□□□□□ -2.33
FCF1-208ENST00000556814 KRTAP6-2Q3LI66 62 aa0.47□□□□□ -2.33
FCF1-208ENST00000556814 KRTAP19-7Q3SYF9 63 aa0.47□□□□□ -2.33
FCF1-208ENST00000556814 MACF1Q9UPN3 7388 aaKnown RBP0.46□□□□□ -2.34
FCF1-208ENST00000556814 MT2AP02795 61 aa0.46□□□□□ -2.34
FCF1-208ENST00000556814 MT1GP13640 62 aa0.46□□□□□ -2.34
FCF1-208ENST00000556814 MT1FP04733 61 aa0.45□□□□□ -2.34
FCF1-208ENST00000556814 MT1MQ8N339 61 aa0.44□□□□□ -2.34
FCF1-208ENST00000556814 KRTAP20-1Q3LI63 56 aa0.43□□□□□ -2.34
FCF1-208ENST00000556814 SYNE1Q8NF91 8797 aaKnown RBP0.43□□□□□ -2.34
FCF1-208ENST00000556814 SYNE2Q8WXH0 6885 aaKnown RBP0.43□□□□□ -2.34
FCF1-208ENST00000556814 MUC12Q9UKN1 5478 aa0.42□□□□□ -2.34
FCF1-208ENST00000556814 KMT2DO14686 5537 aa0.42□□□□□ -2.34
FCF1-208ENST00000556814 NEBP20929 6669 aa0.41□□□□□ -2.34
FCF1-208ENST00000556814 PHGR1C9JFL3 82 aa0.41□□□□□ -2.34
FCF1-208ENST00000556814 MUC5ACP98088 5654 aa0.39□□□□□ -2.35
FCF1-208ENST00000556814 KRTAP6-1Q3LI64 71 aa0.38□□□□□ -2.35
FCF1-208ENST00000556814 DSTQ03001 7570 aaKnown RBP0.36□□□□□ -2.35
FCF1-208ENST00000556814 GPR98Q8WXG9 6306 aa0.32□□□□□ -2.36
FCF1-208ENST00000556814 KRTAP20-2Q3LI61 65 aa0.31□□□□□ -2.36
FCF1-208ENST00000556814 MT4P47944 62 aa0.26□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 159.2 ms