RNA–Protein interactions for RNA: ENST00000556814.5

FCF1-208, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-208ENST00000556814 AEBP2Q6ZN18 517 aaPredicted RBP26.96■■□□□ 1.91
FCF1-208ENST00000556814 CHIC1Q5VXU3 224 aa24.82■■□□□ 1.56
FCF1-208ENST00000556814 SENP3Q9H4L4 574 aaPredicted RBP22.79■■□□□ 1.24
FCF1-208ENST00000556814 PHF23Q9BUL5 403 aaPredicted RBP22.55■■□□□ 1.2
FCF1-208ENST00000556814 FOXD1Q16676 465 aa21.57■■□□□ 1.04
FCF1-208ENST00000556814 POTEDQ86YR6 584 aa21.32■■□□□ 1
FCF1-208ENST00000556814 MSH5O43196 834 aa20.21■□□□□ 0.83
FCF1-208ENST00000556814 PIAS4Q8N2W9 510 aaPredicted RBP19.84■□□□□ 0.77
FCF1-208ENST00000556814 PPP6R1Q9UPN7 881 aa19.69■□□□□ 0.74
FCF1-208ENST00000556814 ADRA2BP18089 450 aa19.52■□□□□ 0.72
FCF1-208ENST00000556814 PLPPR3Q6T4P5 718 aa19.2■□□□□ 0.66
FCF1-208ENST00000556814 MAPK8IP2Q13387 824 aaPredicted RBP18.25■□□□□ 0.51
FCF1-208ENST00000556814 DMRT2Q9Y5R5 561 aa18.03■□□□□ 0.48
FCF1-208ENST00000556814 CACNB1Q02641 598 aaPredicted RBP17.94■□□□□ 0.46
FCF1-208ENST00000556814 SCAF1Q9H7N4 1312 aaKnown RBP17.47■□□□□ 0.39
FCF1-208ENST00000556814 DCAF8L1A6NGE4 600 aa17.35■□□□□ 0.37
FCF1-208ENST00000556814 RNF39Q9H2S5 420 aa17.33■□□□□ 0.36
FCF1-208ENST00000556814 HOXD11P31277 338 aaPredicted RBP17.06■□□□□ 0.32
FCF1-208ENST00000556814 C1QBPQ07021 282 aaKnown RBP16.9■□□□□ 0.3
FCF1-208ENST00000556814 PPP4R3CPQ6ZMV5 832 aa16.85■□□□□ 0.29
FCF1-208ENST00000556814 RNF216Q9NWF9 866 aaPredicted RBP16.67■□□□□ 0.26
FCF1-208ENST00000556814 CNKSR2Q8WXI2 1034 aa16.61■□□□□ 0.25
FCF1-208ENST00000556814 POTEHQ6S545 545 aa16.48■□□□□ 0.23
FCF1-208ENST00000556814 DNAJC5BQ9UF47 199 aa16.43■□□□□ 0.22
FCF1-208ENST00000556814 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.21■□□□□ 0.19
FCF1-208ENST00000556814 DSG3P32926 999 aa15.99■□□□□ 0.15
FCF1-208ENST00000556814 SPINK5Q9NQ38 1064 aaPredicted RBP15.99■□□□□ 0.15
FCF1-208ENST00000556814 U3KPZ7 1027 aaPredicted RBP15.91■□□□□ 0.14
FCF1-208ENST00000556814 CAPN15O75808 1086 aa15.83■□□□□ 0.12
FCF1-208ENST00000556814 NPM3O75607 178 aaKnown RBP15.78■□□□□ 0.12
FCF1-208ENST00000556814 NCBP3Q53F19 620 aaKnown RBP15.74■□□□□ 0.11
FCF1-208ENST00000556814 ABCB7O75027 752 aa15.53■□□□□ 0.08
FCF1-208ENST00000556814 TRHP20396 242 aaPredicted RBP15.44■□□□□ 0.06
FCF1-208ENST00000556814 SLC4A2P04920 1241 aa15.36■□□□□ 0.05
FCF1-208ENST00000556814 CHRDL2Q6WN34 429 aa15.2■□□□□ 0.02
FCF1-208ENST00000556814 ZNF219Q9P2Y4 722 aaPredicted RBP15.18■□□□□ 0.02
FCF1-208ENST00000556814 SP7Q8TDD2 431 aaPredicted RBP15.05■□□□□ -0
FCF1-208ENST00000556814 RBM42Q9BTD8 480 aaKnown RBP15.01□□□□□ -0.01
FCF1-208ENST00000556814 APLP2Q06481 763 aa14.95□□□□□ -0.02
FCF1-208ENST00000556814 POLA2Q14181 598 aa14.86□□□□□ -0.03
FCF1-208ENST00000556814 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.84□□□□□ -0.03
FCF1-208ENST00000556814 KCNA4P22459 653 aa14.84□□□□□ -0.03
FCF1-208ENST00000556814 HNRNPUL2Q1KMD3 747 aaKnown RBP14.84□□□□□ -0.03
FCF1-208ENST00000556814 SAMD1Q6SPF0 538 aaPredicted RBP14.81□□□□□ -0.04
FCF1-208ENST00000556814 PIP4P2Q8N4L2 257 aa14.74□□□□□ -0.05
FCF1-208ENST00000556814 EVX2Q03828 476 aa14.64□□□□□ -0.07
FCF1-208ENST00000556814 HAX1O00165 279 aa14.62□□□□□ -0.07
FCF1-208ENST00000556814 REM2Q8IYK8 340 aaPredicted RBP14.61□□□□□ -0.07
FCF1-208ENST00000556814 AKT1S1Q96B36 256 aa14.61□□□□□ -0.07
FCF1-208ENST00000556814 ATF5Q9Y2D1 282 aaPredicted RBP14.5□□□□□ -0.09
FCF1-208ENST00000556814 PITPNM1O00562 1244 aa14.49□□□□□ -0.09
FCF1-208ENST00000556814 FXR2P51116 673 aaKnown RBP eCLIP14.48□□□□□ -0.09
FCF1-208ENST00000556814 MYCNP04198 464 aaPredicted RBP14.44□□□□□ -0.1
FCF1-208ENST00000556814 OSCARQ8IYS5 282 aa14.43□□□□□ -0.1
FCF1-208ENST00000556814 ZBTB12Q9Y330 459 aaPredicted RBP14.2□□□□□ -0.14
FCF1-208ENST00000556814 LHX8Q68G74 356 aa14.12□□□□□ -0.15
FCF1-208ENST00000556814 GABBR2O75899 941 aa14.07□□□□□ -0.16
FCF1-208ENST00000556814 PRKAR2AP13861 404 aaKnown RBP14.06□□□□□ -0.16
FCF1-208ENST00000556814 C19orf67A6NJJ6 358 aa14.04□□□□□ -0.16
FCF1-208ENST00000556814 SLC4A1APQ9BWU0 796 aaKnown RBP14.03□□□□□ -0.16
FCF1-208ENST00000556814 PLSCR2Q9NRY7 297 aa13.91□□□□□ -0.18
FCF1-208ENST00000556814 FOXD4L1Q9NU39 408 aa13.91□□□□□ -0.18
FCF1-208ENST00000556814 CLEC11AQ9Y240 323 aa13.91□□□□□ -0.18
FCF1-208ENST00000556814 POTEIP0CG38 1075 aa13.9□□□□□ -0.18
FCF1-208ENST00000556814 CHADLQ6NUI6 762 aa13.86□□□□□ -0.19
FCF1-208ENST00000556814 SPDYE2BA6NHP3 402 aa13.82□□□□□ -0.2
FCF1-208ENST00000556814 SPDYE6P0CI01 402 aa13.82□□□□□ -0.2
FCF1-208ENST00000556814 SPDYE2Q495Y8 402 aa13.82□□□□□ -0.2
FCF1-208ENST00000556814 EHMT2Q96KQ7 1210 aa13.78□□□□□ -0.2
FCF1-208ENST00000556814 SPDYE1Q8NFV5 336 aaPredicted RBP13.76□□□□□ -0.21
FCF1-208ENST00000556814 ZBTB22O15209 634 aa13.74□□□□□ -0.21
FCF1-208ENST00000556814 MKRN4PQ13434 485 aaPredicted RBP13.73□□□□□ -0.21
FCF1-208ENST00000556814 SSUH2Q9Y2M2 353 aa13.65□□□□□ -0.22
FCF1-208ENST00000556814 ZNF692Q9BU19 519 aaPredicted RBP13.61□□□□□ -0.23
FCF1-208ENST00000556814 FBLN2P98095 1184 aa13.6□□□□□ -0.23
FCF1-208ENST00000556814 CD44P16070 742 aaKnown RBP13.54□□□□□ -0.24
FCF1-208ENST00000556814 CSRNP3Q8WYN3 585 aa13.54□□□□□ -0.24
FCF1-208ENST00000556814 PRR29P0C7W0 189 aa13.5□□□□□ -0.25
FCF1-208ENST00000556814 OTUD5Q96G74 571 aa13.47□□□□□ -0.25
FCF1-208ENST00000556814 POTEB2H3BUK9 544 aa13.46□□□□□ -0.25
FCF1-208ENST00000556814 ATXN8OSP0DMR3 200 aa13.45□□□□□ -0.26
FCF1-208ENST00000556814 FARP1Q9Y4F1 1045 aaPredicted RBP13.44□□□□□ -0.26
FCF1-208ENST00000556814 PABPN1Q86U42 306 aaKnown RBP eCLIP13.43□□□□□ -0.26
FCF1-208ENST00000556814 DCBLD2Q96PD2 775 aa13.39□□□□□ -0.27
FCF1-208ENST00000556814 POTEMA6NI47 508 aa13.35□□□□□ -0.27
FCF1-208ENST00000556814 GALR2O43603 387 aaPredicted RBP13.3□□□□□ -0.28
FCF1-208ENST00000556814 POTEGQ6S5H5 508 aa13.29□□□□□ -0.28
FCF1-208ENST00000556814 ZNF579Q8NAF0 562 aaKnown RBP13.26□□□□□ -0.29
FCF1-208ENST00000556814 ZRANB1Q9UGI0 708 aa13.24□□□□□ -0.29
FCF1-208ENST00000556814 CLCN6P51797 869 aa13.21□□□□□ -0.29
FCF1-208ENST00000556814 PELP1Q8IZL8 1130 aaKnown RBP13.21□□□□□ -0.29
FCF1-208ENST00000556814 POTEJP0CG39 1038 aa13.15□□□□□ -0.3
FCF1-208ENST00000556814 LCE2DQ5TA82 110 aaPredicted RBP13.12□□□□□ -0.31
FCF1-208ENST00000556814 CREBZFQ9NS37 354 aa13.12□□□□□ -0.31
FCF1-208ENST00000556814 PHF12Q96QT6 1004 aa13.1□□□□□ -0.31
FCF1-208ENST00000556814 PCDH10Q9P2E7 1040 aa12.93□□□□□ -0.34
FCF1-208ENST00000556814 FAM163AQ96GL9 167 aaPredicted RBP12.92□□□□□ -0.34
FCF1-208ENST00000556814 METRNQ9UJH8 293 aa12.92□□□□□ -0.34
FCF1-208ENST00000556814 ATMINO43313 823 aaPredicted RBP12.86□□□□□ -0.35
FCF1-208ENST00000556814 ASTLQ6HA08 431 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 483.9 ms