RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 SPATA8Q6RVD6 105 aa2.11□□□□□ -2.07
ATXN3-243ENST00000556671 A0A1B0GU69 56 aa2.1□□□□□ -2.07
ATXN3-243ENST00000556671 UQCR11O14957 56 aa2.1□□□□□ -2.07
ATXN3-243ENST00000556671 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.07
ATXN3-243ENST00000556671 SPRR5A0A1B0GTR4 108 aa2.08□□□□□ -2.08
ATXN3-243ENST00000556671 K7ERS5 55 aa2.07□□□□□ -2.08
ATXN3-243ENST00000556671 MIR22HGQ0VDD5 57 aa2.07□□□□□ -2.08
ATXN3-243ENST00000556671 LINC01554Q52M75 96 aa2.06□□□□□ -2.08
ATXN3-243ENST00000556671 CRIPTQ9P021 101 aa2.06□□□□□ -2.08
ATXN3-243ENST00000556671 M0QZ58 72 aa2.05□□□□□ -2.08
ATXN3-243ENST00000556671 R4GN34 69 aa2.05□□□□□ -2.08
ATXN3-243ENST00000556671 H0YAA0 97 aa2.04□□□□□ -2.08
ATXN3-243ENST00000556671 P0C880 135 aa2.04□□□□□ -2.08
ATXN3-243ENST00000556671 PLAC4Q8WY50 150 aa2.04□□□□□ -2.08
ATXN3-243ENST00000556671 SPRR2GQ9BYE4 73 aa2.04□□□□□ -2.08
ATXN3-243ENST00000556671 KRTAP19-6Q3LI70 58 aa2.03□□□□□ -2.08
ATXN3-243ENST00000556671 MT1BP07438 61 aa2.01□□□□□ -2.09
ATXN3-243ENST00000556671 KRTAP19-8Q3LI54 63 aa2.01□□□□□ -2.09
ATXN3-243ENST00000556671 SPINT4Q6UDR6 99 aa2.01□□□□□ -2.09
ATXN3-243ENST00000556671 A0A1B0GU33 70 aa1.99□□□□□ -2.09
ATXN3-243ENST00000556671 USH2AO75445 5202 aa1.98□□□□□ -2.09
ATXN3-243ENST00000556671 KRTAP25-1Q3LHN0 102 aa1.97□□□□□ -2.09
ATXN3-243ENST00000556671 GPR98Q8WXG9 6306 aa1.97□□□□□ -2.09
ATXN3-243ENST00000556671 SSPOA2VEC9 5147 aa1.97□□□□□ -2.09
ATXN3-243ENST00000556671 PRO2289Q9P1D8 64 aa1.96□□□□□ -2.1
ATXN3-243ENST00000556671 A0A0D9SG42 100 aa1.95□□□□□ -2.1
ATXN3-243ENST00000556671 FCGBPQ9Y6R7 5405 aaPredicted RBP1.94□□□□□ -2.1
ATXN3-243ENST00000556671 NEBP20929 6669 aa1.92□□□□□ -2.1
ATXN3-243ENST00000556671 MT1XP80297 61 aa1.91□□□□□ -2.1
ATXN3-243ENST00000556671 KRTAP20-1Q3LI63 56 aa1.91□□□□□ -2.1
ATXN3-243ENST00000556671 KRTAP6-3Q3LI67 103 aa1.91□□□□□ -2.1
ATXN3-243ENST00000556671 KRTAP13-4Q3LI77 160 aa1.91□□□□□ -2.1
ATXN3-243ENST00000556671 ROMO1P60602 79 aa1.9□□□□□ -2.11
ATXN3-243ENST00000556671 MACF1Q9UPN3 7388 aaKnown RBP1.89□□□□□ -2.11
ATXN3-243ENST00000556671 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
ATXN3-243ENST00000556671 KRTAP8-1Q8IUC2 63 aa1.87□□□□□ -2.11
ATXN3-243ENST00000556671 SPRR2FQ96RM1 72 aa1.86□□□□□ -2.11
ATXN3-243ENST00000556671 SYNE2Q8WXH0 6885 aaKnown RBP1.86□□□□□ -2.11
ATXN3-243ENST00000556671 KRTAP12-1P59990 96 aa1.83□□□□□ -2.12
ATXN3-243ENST00000556671 SPRR2EP22531 72 aa1.82□□□□□ -2.12
ATXN3-243ENST00000556671 SPRR2BP35325 72 aa1.82□□□□□ -2.12
ATXN3-243ENST00000556671 SPRR2AP35326 72 aa1.82□□□□□ -2.12
ATXN3-243ENST00000556671 MUC12Q9UKN1 5478 aa1.78□□□□□ -2.12
ATXN3-243ENST00000556671 TNP1P09430 55 aa1.77□□□□□ -2.13
ATXN3-243ENST00000556671 SPRR2DP22532 72 aa1.76□□□□□ -2.13
ATXN3-243ENST00000556671 C10orf95Q9H7T3 257 aa1.76□□□□□ -2.13
ATXN3-243ENST00000556671 KRTAP2-3P0C7H8 128 aa1.75□□□□□ -2.13
ATXN3-243ENST00000556671 KRTAP2-4Q9BYR9 128 aa1.75□□□□□ -2.13
ATXN3-243ENST00000556671 KMT2DO14686 5537 aa1.74□□□□□ -2.13
ATXN3-243ENST00000556671 KRTAP19-5Q3LI72 72 aa1.72□□□□□ -2.13
ATXN3-243ENST00000556671 KRTAP12-4P60329 112 aa1.71□□□□□ -2.14
ATXN3-243ENST00000556671 MDN1Q9NU22 5596 aa1.69□□□□□ -2.14
ATXN3-243ENST00000556671 KRTAP19-7Q3SYF9 63 aa1.69□□□□□ -2.14
ATXN3-243ENST00000556671 KRTAP2-1Q9BYU5 128 aa1.69□□□□□ -2.14
ATXN3-243ENST00000556671 MT1EP04732 61 aa1.68□□□□□ -2.14
ATXN3-243ENST00000556671 KRTAP19-3Q7Z4W3 81 aa1.66□□□□□ -2.14
ATXN3-243ENST00000556671 MT1GP13640 62 aa1.65□□□□□ -2.15
ATXN3-243ENST00000556671 AHNAK2Q8IVF2 5795 aa1.64□□□□□ -2.15
ATXN3-243ENST00000556671 KRTAP12-3P60328 96 aa1.64□□□□□ -2.15
ATXN3-243ENST00000556671 MT1LQ93083 61 aa1.63□□□□□ -2.15
ATXN3-243ENST00000556671 MT1MQ8N339 61 aa1.61□□□□□ -2.15
ATXN3-243ENST00000556671 HMCN1Q96RW7 5635 aa1.55□□□□□ -2.16
ATXN3-243ENST00000556671 MT4P47944 62 aa1.55□□□□□ -2.16
ATXN3-243ENST00000556671 DSTQ03001 7570 aaKnown RBP1.55□□□□□ -2.16
ATXN3-243ENST00000556671 AHNAKQ09666 5890 aaKnown RBP1.5□□□□□ -2.17
ATXN3-243ENST00000556671 INE1O15225 51 aa1.48□□□□□ -2.17
ATXN3-243ENST00000556671 KRTAP5-10Q6L8G5 202 aa1.46□□□□□ -2.18
ATXN3-243ENST00000556671 MUC5BQ9HC84 5762 aaPredicted RBP1.42□□□□□ -2.18
ATXN3-243ENST00000556671 KRTAP20-2Q3LI61 65 aa1.4□□□□□ -2.19
ATXN3-243ENST00000556671 KRTAP6-1Q3LI64 71 aa1.39□□□□□ -2.19
ATXN3-243ENST00000556671 MT1AP04731 61 aa1.38□□□□□ -2.19
ATXN3-243ENST00000556671 SYNE1Q8NF91 8797 aaKnown RBP1.35□□□□□ -2.19
ATXN3-243ENST00000556671 KRTAP6-2Q3LI66 62 aa1.33□□□□□ -2.2
ATXN3-243ENST00000556671 MUC5ACP98088 5654 aa1.32□□□□□ -2.2
ATXN3-243ENST00000556671 PRM1P04553 51 aa0.97□□□□□ -2.25
ATXN3-243ENST00000556671 PHGR1C9JFL3 82 aa0.95□□□□□ -2.26
ATXN3-243ENST00000556671 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
ATXN3-243ENST00000556671 KRTAP21-1Q3LI58 79 aa0.7□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 680.9 ms