RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 LRP2P98164 4655 aa2.24□□□□□ -2.05
SRP54-211ENST00000556445 M0R2T5 61 aa2.23□□□□□ -2.05
SRP54-211ENST00000556445 KRTAP12-1P59990 96 aa2.23□□□□□ -2.05
SRP54-211ENST00000556445 ABCA13Q86UQ4 5058 aa2.23□□□□□ -2.05
SRP54-211ENST00000556445 MUC17Q685J3 4493 aa2.21□□□□□ -2.06
SRP54-211ENST00000556445 LPAP08519 4548 aa2.2□□□□□ -2.06
SRP54-211ENST00000556445 MT1HP80294 61 aa2.19□□□□□ -2.06
SRP54-211ENST00000556445 KRTAP5-7Q6L8G8 165 aa2.17□□□□□ -2.06
SRP54-211ENST00000556445 PLAC4Q8WY50 150 aa2.16□□□□□ -2.06
SRP54-211ENST00000556445 SPRR2GQ9BYE4 73 aa2.16□□□□□ -2.06
SRP54-211ENST00000556445 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
SRP54-211ENST00000556445 FLGP20930 4061 aaPredicted RBP2.14□□□□□ -2.07
SRP54-211ENST00000556445 MT2AP02795 61 aa2.12□□□□□ -2.07
SRP54-211ENST00000556445 HERC1Q15751 4861 aa2.12□□□□□ -2.07
SRP54-211ENST00000556445 PCLOQ9Y6V0 5065 aa2.12□□□□□ -2.07
SRP54-211ENST00000556445 MT1FP04733 61 aa2.1□□□□□ -2.07
SRP54-211ENST00000556445 TNP1P09430 55 aa2.09□□□□□ -2.07
SRP54-211ENST00000556445 KRTAP19-8Q3LI54 63 aa2.09□□□□□ -2.07
SRP54-211ENST00000556445 C10orf95Q9H7T3 257 aa2.09□□□□□ -2.07
SRP54-211ENST00000556445 HMCN2Q8NDA2 5059 aa2.09□□□□□ -2.08
SRP54-211ENST00000556445 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
SRP54-211ENST00000556445 KRTAP6-3Q3LI67 103 aa2.05□□□□□ -2.08
SRP54-211ENST00000556445 MT1BP07438 61 aa2.01□□□□□ -2.09
SRP54-211ENST00000556445 RNF213Q63HN8 5207 aa2.01□□□□□ -2.09
SRP54-211ENST00000556445 MUC2Q02817 5179 aa2□□□□□ -2.09
SRP54-211ENST00000556445 UBR4Q5T4S7 5183 aa1.97□□□□□ -2.09
SRP54-211ENST00000556445 MT1XP80297 61 aa1.96□□□□□ -2.1
SRP54-211ENST00000556445 FAT4Q6V0I7 4981 aa1.93□□□□□ -2.1
SRP54-211ENST00000556445 KRTAP8-1Q8IUC2 63 aa1.92□□□□□ -2.1
SRP54-211ENST00000556445 KRTAP12-4P60329 112 aa1.9□□□□□ -2.11
SRP54-211ENST00000556445 KRTAP12-3P60328 96 aa1.86□□□□□ -2.11
SRP54-211ENST00000556445 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
SRP54-211ENST00000556445 KRTAP19-6Q3LI70 58 aa1.86□□□□□ -2.11
SRP54-211ENST00000556445 KRTAP19-5Q3LI72 72 aa1.8□□□□□ -2.12
SRP54-211ENST00000556445 KRTAP19-7Q3SYF9 63 aa1.75□□□□□ -2.13
SRP54-211ENST00000556445 HMCN1Q96RW7 5635 aa1.74□□□□□ -2.13
SRP54-211ENST00000556445 MT1EP04732 61 aa1.73□□□□□ -2.13
SRP54-211ENST00000556445 USH2AO75445 5202 aa1.72□□□□□ -2.13
SRP54-211ENST00000556445 MT1LQ93083 61 aa1.71□□□□□ -2.14
SRP54-211ENST00000556445 CRCT1Q9UGL9 99 aa1.69□□□□□ -2.14
SRP54-211ENST00000556445 MT1GP13640 62 aa1.68□□□□□ -2.14
SRP54-211ENST00000556445 KRTAP19-3Q7Z4W3 81 aa1.67□□□□□ -2.14
SRP54-211ENST00000556445 SSPOA2VEC9 5147 aa1.66□□□□□ -2.14
SRP54-211ENST00000556445 SPRR2FQ96RM1 72 aa1.65□□□□□ -2.15
SRP54-211ENST00000556445 MT1MQ8N339 61 aa1.62□□□□□ -2.15
SRP54-211ENST00000556445 FCGBPQ9Y6R7 5405 aaPredicted RBP1.6□□□□□ -2.15
SRP54-211ENST00000556445 KRTAP2-3P0C7H8 128 aa1.56□□□□□ -2.16
SRP54-211ENST00000556445 KRTAP2-4Q9BYR9 128 aa1.56□□□□□ -2.16
SRP54-211ENST00000556445 KRTAP2-1Q9BYU5 128 aa1.56□□□□□ -2.16
SRP54-211ENST00000556445 SPRR2EP22531 72 aa1.55□□□□□ -2.16
SRP54-211ENST00000556445 SPRR2BP35325 72 aa1.55□□□□□ -2.16
SRP54-211ENST00000556445 SPRR2AP35326 72 aa1.55□□□□□ -2.16
SRP54-211ENST00000556445 KMT2DO14686 5537 aa1.54□□□□□ -2.16
SRP54-211ENST00000556445 SPRR2DP22532 72 aa1.5□□□□□ -2.17
SRP54-211ENST00000556445 MT1AP04731 61 aa1.47□□□□□ -2.17
SRP54-211ENST00000556445 FSIP2Q5CZC0 6907 aa1.46□□□□□ -2.18
SRP54-211ENST00000556445 KRTAP6-1Q3LI64 71 aa1.42□□□□□ -2.18
SRP54-211ENST00000556445 MUC12Q9UKN1 5478 aa1.42□□□□□ -2.18
SRP54-211ENST00000556445 MACF1Q9UPN3 7388 aaKnown RBP1.39□□□□□ -2.19
SRP54-211ENST00000556445 MDN1Q9NU22 5596 aa1.32□□□□□ -2.2
SRP54-211ENST00000556445 DSTQ03001 7570 aaKnown RBP1.31□□□□□ -2.2
SRP54-211ENST00000556445 KRTAP20-1Q3LI63 56 aa1.31□□□□□ -2.2
SRP54-211ENST00000556445 KRTAP6-2Q3LI66 62 aa1.29□□□□□ -2.2
SRP54-211ENST00000556445 SYNE2Q8WXH0 6885 aaKnown RBP1.28□□□□□ -2.2
SRP54-211ENST00000556445 MT4P47944 62 aa1.27□□□□□ -2.21
SRP54-211ENST00000556445 KRTAP20-2Q3LI61 65 aa1.27□□□□□ -2.21
SRP54-211ENST00000556445 SYNE1Q8NF91 8797 aaKnown RBP1.24□□□□□ -2.21
SRP54-211ENST00000556445 NEBP20929 6669 aa1.21□□□□□ -2.22
SRP54-211ENST00000556445 PRM1P04553 51 aa1.14□□□□□ -2.23
SRP54-211ENST00000556445 KRTAP5-10Q6L8G5 202 aa1.06□□□□□ -2.24
SRP54-211ENST00000556445 GPR98Q8WXG9 6306 aa1.05□□□□□ -2.24
SRP54-211ENST00000556445 MUC5ACP98088 5654 aa0.95□□□□□ -2.26
SRP54-211ENST00000556445 AHNAK2Q8IVF2 5795 aa0.91□□□□□ -2.26
SRP54-211ENST00000556445 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
SRP54-211ENST00000556445 KRTAP21-1Q3LI58 79 aa0.88□□□□□ -2.27
SRP54-211ENST00000556445 MUC5BQ9HC84 5762 aaPredicted RBP0.79□□□□□ -2.28
SRP54-211ENST00000556445 PHGR1C9JFL3 82 aa0.79□□□□□ -2.28
SRP54-211ENST00000556445 AHNAKQ09666 5890 aaKnown RBP0.76□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 103.6 ms