RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 KRTAP10-10P60014 251 aa1.95□□□□□ -2.1
ATXN3-240ENST00000556339 USH2AO75445 5202 aa1.94□□□□□ -2.1
ATXN3-240ENST00000556339 FCGBPQ9Y6R7 5405 aaPredicted RBP1.94□□□□□ -2.1
ATXN3-240ENST00000556339 HMCN1Q96RW7 5635 aa1.93□□□□□ -2.1
ATXN3-240ENST00000556339 KRTAP25-1Q3LHN0 102 aa1.93□□□□□ -2.1
ATXN3-240ENST00000556339 CSAG1Q6PB30 78 aa1.93□□□□□ -2.1
ATXN3-240ENST00000556339 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
ATXN3-240ENST00000556339 ADM2Q7Z4H4 148 aa1.92□□□□□ -2.1
ATXN3-240ENST00000556339 MT2AP02795 61 aa1.9□□□□□ -2.11
ATXN3-240ENST00000556339 ROMO1P60602 79 aa1.9□□□□□ -2.11
ATXN3-240ENST00000556339 S4R3F8 94 aa1.9□□□□□ -2.11
ATXN3-240ENST00000556339 MT1FP04733 61 aa1.88□□□□□ -2.11
ATXN3-240ENST00000556339 M0QZ58 72 aa1.87□□□□□ -2.11
ATXN3-240ENST00000556339 SYNE2Q8WXH0 6885 aaKnown RBP1.85□□□□□ -2.11
ATXN3-240ENST00000556339 MACF1Q9UPN3 7388 aaKnown RBP1.85□□□□□ -2.11
ATXN3-240ENST00000556339 KRTAP5-7Q6L8G8 165 aa1.85□□□□□ -2.11
ATXN3-240ENST00000556339 CRIPTQ9P021 101 aa1.84□□□□□ -2.11
ATXN3-240ENST00000556339 KRTAP19-6Q3LI70 58 aa1.81□□□□□ -2.12
ATXN3-240ENST00000556339 KRTAP13-4Q3LI77 160 aa1.81□□□□□ -2.12
ATXN3-240ENST00000556339 P0C880 135 aa1.8□□□□□ -2.12
ATXN3-240ENST00000556339 KRTAP12-1P59990 96 aa1.8□□□□□ -2.12
ATXN3-240ENST00000556339 NEBP20929 6669 aa1.8□□□□□ -2.12
ATXN3-240ENST00000556339 A0A0D9SG42 100 aa1.79□□□□□ -2.12
ATXN3-240ENST00000556339 KRTAP6-3Q3LI67 103 aa1.78□□□□□ -2.12
ATXN3-240ENST00000556339 SPINT4Q6UDR6 99 aa1.78□□□□□ -2.12
ATXN3-240ENST00000556339 MUC12Q9UKN1 5478 aa1.78□□□□□ -2.12
ATXN3-240ENST00000556339 R4GN34 69 aa1.76□□□□□ -2.13
ATXN3-240ENST00000556339 KRTAP20-1Q3LI63 56 aa1.74□□□□□ -2.13
ATXN3-240ENST00000556339 C10orf95Q9H7T3 257 aa1.71□□□□□ -2.14
ATXN3-240ENST00000556339 MT1BP07438 61 aa1.7□□□□□ -2.14
ATXN3-240ENST00000556339 KRTAP19-8Q3LI54 63 aa1.7□□□□□ -2.14
ATXN3-240ENST00000556339 KMT2DO14686 5537 aa1.7□□□□□ -2.14
ATXN3-240ENST00000556339 MDN1Q9NU22 5596 aa1.69□□□□□ -2.14
ATXN3-240ENST00000556339 SPRR2GQ9BYE4 73 aa1.69□□□□□ -2.14
ATXN3-240ENST00000556339 PLAC4Q8WY50 150 aa1.68□□□□□ -2.14
ATXN3-240ENST00000556339 CAMK2N1Q7Z7J9 78 aa1.66□□□□□ -2.14
ATXN3-240ENST00000556339 PRO2289Q9P1D8 64 aa1.66□□□□□ -2.14
ATXN3-240ENST00000556339 GPR98Q8WXG9 6306 aa1.66□□□□□ -2.14
ATXN3-240ENST00000556339 TNP1P09430 55 aa1.65□□□□□ -2.15
ATXN3-240ENST00000556339 LUZP6Q538Z0 58 aa1.65□□□□□ -2.15
ATXN3-240ENST00000556339 KRTAP2-3P0C7H8 128 aa1.64□□□□□ -2.15
ATXN3-240ENST00000556339 SPRR2EP22531 72 aa1.64□□□□□ -2.15
ATXN3-240ENST00000556339 SPRR2BP35325 72 aa1.64□□□□□ -2.15
ATXN3-240ENST00000556339 SPRR2AP35326 72 aa1.64□□□□□ -2.15
ATXN3-240ENST00000556339 SPRR2FQ96RM1 72 aa1.64□□□□□ -2.15
ATXN3-240ENST00000556339 KRTAP2-4Q9BYR9 128 aa1.64□□□□□ -2.15
ATXN3-240ENST00000556339 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
ATXN3-240ENST00000556339 SPRR5A0A1B0GTR4 108 aa1.62□□□□□ -2.15
ATXN3-240ENST00000556339 KRTAP8-1Q8IUC2 63 aa1.62□□□□□ -2.15
ATXN3-240ENST00000556339 SPRR2DP22532 72 aa1.58□□□□□ -2.16
ATXN3-240ENST00000556339 MT1XP80297 61 aa1.58□□□□□ -2.16
ATXN3-240ENST00000556339 KRTAP2-1Q9BYU5 128 aa1.58□□□□□ -2.16
ATXN3-240ENST00000556339 INE1O15225 51 aa1.48□□□□□ -2.17
ATXN3-240ENST00000556339 AHNAK2Q8IVF2 5795 aa1.46□□□□□ -2.18
ATXN3-240ENST00000556339 KRTAP12-3P60328 96 aa1.45□□□□□ -2.18
ATXN3-240ENST00000556339 DSTQ03001 7570 aaKnown RBP1.45□□□□□ -2.18
ATXN3-240ENST00000556339 KRTAP12-4P60329 112 aa1.43□□□□□ -2.18
ATXN3-240ENST00000556339 KRTAP5-10Q6L8G5 202 aa1.42□□□□□ -2.18
ATXN3-240ENST00000556339 KRTAP19-3Q7Z4W3 81 aa1.42□□□□□ -2.18
ATXN3-240ENST00000556339 MT1EP04732 61 aa1.4□□□□□ -2.19
ATXN3-240ENST00000556339 KRTAP19-5Q3LI72 72 aa1.4□□□□□ -2.19
ATXN3-240ENST00000556339 KRTAP19-7Q3SYF9 63 aa1.4□□□□□ -2.19
ATXN3-240ENST00000556339 MT1GP13640 62 aa1.39□□□□□ -2.19
ATXN3-240ENST00000556339 MT4P47944 62 aa1.39□□□□□ -2.19
ATXN3-240ENST00000556339 MT1MQ8N339 61 aa1.35□□□□□ -2.19
ATXN3-240ENST00000556339 MT1LQ93083 61 aa1.34□□□□□ -2.19
ATXN3-240ENST00000556339 AHNAKQ09666 5890 aaKnown RBP1.27□□□□□ -2.21
ATXN3-240ENST00000556339 KRTAP20-2Q3LI61 65 aa1.24□□□□□ -2.21
ATXN3-240ENST00000556339 MUC5ACP98088 5654 aa1.23□□□□□ -2.21
ATXN3-240ENST00000556339 MUC5BQ9HC84 5762 aaPredicted RBP1.23□□□□□ -2.21
ATXN3-240ENST00000556339 SYNE1Q8NF91 8797 aaKnown RBP1.21□□□□□ -2.22
ATXN3-240ENST00000556339 MT1AP04731 61 aa1.15□□□□□ -2.23
ATXN3-240ENST00000556339 KRTAP6-1Q3LI64 71 aa1.15□□□□□ -2.23
ATXN3-240ENST00000556339 KRTAP6-2Q3LI66 62 aa1.12□□□□□ -2.23
ATXN3-240ENST00000556339 PRM1P04553 51 aa0.97□□□□□ -2.25
ATXN3-240ENST00000556339 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
ATXN3-240ENST00000556339 PHGR1C9JFL3 82 aa0.8□□□□□ -2.28
ATXN3-240ENST00000556339 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 100.2 ms