RNA–Protein interactions for RNA: ENST00000556216.5

CGRRF1-204, Transcript of cell growth regulator with ring finger domain 1, humanhuman

TSL 5

Gene CGRRF1, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-204ENST00000556216 KRTAP4-9Q9BYQ8 210 aa5.23□□□□□ -1.57
CGRRF1-204ENST00000556216 PP632Q6XCG6 107 aa5.21□□□□□ -1.58
CGRRF1-204ENST00000556216 KRTAP4-3Q9BYR4 195 aa5.21□□□□□ -1.58
CGRRF1-204ENST00000556216 MIR22HGQ0VDD5 57 aa5.14□□□□□ -1.59
CGRRF1-204ENST00000556216 PCP4P48539 62 aa5.13□□□□□ -1.59
CGRRF1-204ENST00000556216 PSPHP1O15172 72 aa5.11□□□□□ -1.59
CGRRF1-204ENST00000556216 KRTAP4-7Q9BYR0 210 aa5.11□□□□□ -1.59
CGRRF1-204ENST00000556216 KRTAP12-3P60328 96 aa5.1□□□□□ -1.59
CGRRF1-204ENST00000556216 LCE1DQ5T752 114 aa5.07□□□□□ -1.6
CGRRF1-204ENST00000556216 HMCN1Q96RW7 5635 aa5.07□□□□□ -1.6
CGRRF1-204ENST00000556216 GPR98Q8WXG9 6306 aa5.05□□□□□ -1.6
CGRRF1-204ENST00000556216 MT4P47944 62 aa5.04□□□□□ -1.6
CGRRF1-204ENST00000556216 Q1T7F1 81 aa5.04□□□□□ -1.6
CGRRF1-204ENST00000556216 LCE4AQ5TA78 99 aa5□□□□□ -1.61
CGRRF1-204ENST00000556216 V9GYY9 64 aa5□□□□□ -1.61
CGRRF1-204ENST00000556216 KRTAP25-1Q3LHN0 102 aa4.99□□□□□ -1.61
CGRRF1-204ENST00000556216 KRTAP5-4Q6L8H1 288 aa4.97□□□□□ -1.61
CGRRF1-204ENST00000556216 K7ERS5 55 aa4.96□□□□□ -1.62
CGRRF1-204ENST00000556216 A6NED7 52 aa4.89□□□□□ -1.63
CGRRF1-204ENST00000556216 KRTAP5-3Q6L8H2 238 aa4.84□□□□□ -1.63
CGRRF1-204ENST00000556216 AHNAK2Q8IVF2 5795 aa4.84□□□□□ -1.63
CGRRF1-204ENST00000556216 SVIPQ8NHG7 77 aa4.83□□□□□ -1.64
CGRRF1-204ENST00000556216 KRTAP5-5Q701N2 237 aaPredicted RBP4.81□□□□□ -1.64
CGRRF1-204ENST00000556216 KRTAP23-1A1A580 65 aa4.78□□□□□ -1.64
CGRRF1-204ENST00000556216 KRTAP15-1Q3LI76 137 aa4.76□□□□□ -1.65
CGRRF1-204ENST00000556216 SYNE1Q8NF91 8797 aaKnown RBP4.76□□□□□ -1.65
CGRRF1-204ENST00000556216 RPS28P62857 69 aaKnown RBP4.76□□□□□ -1.65
CGRRF1-204ENST00000556216 CDC42SE1Q9NRR8 79 aa4.75□□□□□ -1.65
CGRRF1-204ENST00000556216 LCE3CQ5T5A8 94 aa4.7□□□□□ -1.66
CGRRF1-204ENST00000556216 ROMO1P60602 79 aa4.69□□□□□ -1.66
CGRRF1-204ENST00000556216 KRTAP20-2Q3LI61 65 aa4.69□□□□□ -1.66
CGRRF1-204ENST00000556216 KRTAP5-10Q6L8G5 202 aa4.69□□□□□ -1.66
CGRRF1-204ENST00000556216 KRTAP9-9Q9BYP9 154 aa4.69□□□□□ -1.66
CGRRF1-204ENST00000556216 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
CGRRF1-204ENST00000556216 KRTAP19-4Q3LI73 84 aa4.67□□□□□ -1.66
CGRRF1-204ENST00000556216 SPRR5A0A1B0GTR4 108 aa4.62□□□□□ -1.67
CGRRF1-204ENST00000556216 KRTAP12-4P60329 112 aa4.62□□□□□ -1.67
CGRRF1-204ENST00000556216 KRTAP4-2Q9BYR5 136 aa4.56□□□□□ -1.68
CGRRF1-204ENST00000556216 KRTAP9-6A8MVA2 160 aa4.52□□□□□ -1.69
CGRRF1-204ENST00000556216 KRTAP6-1Q3LI64 71 aa4.49□□□□□ -1.69
CGRRF1-204ENST00000556216 MT1AP04731 61 aa4.46□□□□□ -1.7
CGRRF1-204ENST00000556216 KRTAP5-7Q6L8G8 165 aa4.46□□□□□ -1.7
CGRRF1-204ENST00000556216 KRTAP4-12Q9BQ66 201 aa4.38□□□□□ -1.71
CGRRF1-204ENST00000556216 KRTAP5-2Q701N4 177 aa4.36□□□□□ -1.71
CGRRF1-204ENST00000556216 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
CGRRF1-204ENST00000556216 KRTAP4-11Q9BYQ6 195 aa4.28□□□□□ -1.72
CGRRF1-204ENST00000556216 KRTAP6-2Q3LI66 62 aa4.28□□□□□ -1.72
CGRRF1-204ENST00000556216 BRK1Q8WUW1 75 aa4.22□□□□□ -1.73
CGRRF1-204ENST00000556216 KRTAP5-8O75690 187 aa4.15□□□□□ -1.75
CGRRF1-204ENST00000556216 PRO0628Q9UI54 55 aa4.15□□□□□ -1.75
CGRRF1-204ENST00000556216 MT3P25713 68 aa4.06□□□□□ -1.76
CGRRF1-204ENST00000556216 MUC5BQ9HC84 5762 aaPredicted RBP4.01□□□□□ -1.77
CGRRF1-204ENST00000556216 PMAIP1Q13794 54 aa3.95□□□□□ -1.78
CGRRF1-204ENST00000556216 KRTAP5-1Q6L8H4 278 aa3.93□□□□□ -1.78
CGRRF1-204ENST00000556216 AHNAKQ09666 5890 aaKnown RBP3.93□□□□□ -1.78
CGRRF1-204ENST00000556216 MUC5ACP98088 5654 aa3.92□□□□□ -1.78
CGRRF1-204ENST00000556216 PRAC1Q96KF2 57 aa3.89□□□□□ -1.79
CGRRF1-204ENST00000556216 KTN1-AS1Q86SY8 53 aa3.83□□□□□ -1.8
CGRRF1-204ENST00000556216 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
CGRRF1-204ENST00000556216 LCE1BQ5T7P3 118 aa3.56□□□□□ -1.84
CGRRF1-204ENST00000556216 LCE1CQ5T751 118 aa3.46□□□□□ -1.86
CGRRF1-204ENST00000556216 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.38□□□□□ -1.87
CGRRF1-204ENST00000556216 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
CGRRF1-204ENST00000556216 H3BS24 57 aa3.37□□□□□ -1.87
CGRRF1-204ENST00000556216 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
CGRRF1-204ENST00000556216 LUZP6Q538Z0 58 aa3.15□□□□□ -1.91
CGRRF1-204ENST00000556216 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
CGRRF1-204ENST00000556216 A0A0A0MQY5 61 aa3.01□□□□□ -1.93
CGRRF1-204ENST00000556216 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
CGRRF1-204ENST00000556216 NDUFAF8A1L188 74 aa2.98□□□□□ -1.93
CGRRF1-204ENST00000556216 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
CGRRF1-204ENST00000556216 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
CGRRF1-204ENST00000556216 PHGR1C9JFL3 82 aa2.72□□□□□ -1.97
CGRRF1-204ENST00000556216 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
CGRRF1-204ENST00000556216 INE1O15225 51 aa2.51□□□□□ -2.01
CGRRF1-204ENST00000556216 PRM1P04553 51 aa2.45□□□□□ -2.02
CGRRF1-204ENST00000556216 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
CGRRF1-204ENST00000556216 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 46.1 ms