RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 KRTAP9-4Q9BYQ2 154 aa2.74□□□□□ -1.97
CHD8-209ENST00000555935 KRTAP4-8A0A0G2JLE6 195 aa2.7□□□□□ -1.98
CHD8-209ENST00000555935 KRTAP19-7Q3SYF9 63 aa2.66□□□□□ -1.98
CHD8-209ENST00000555935 LCE1DQ5T752 114 aa2.63□□□□□ -1.99
CHD8-209ENST00000555935 KRTAP4-7Q9BYR0 210 aa2.63□□□□□ -1.99
CHD8-209ENST00000555935 MT1LQ93083 61 aa2.61□□□□□ -1.99
CHD8-209ENST00000555935 CRCT1Q9UGL9 99 aa2.58□□□□□ -2
CHD8-209ENST00000555935 MT1EP04732 61 aa2.58□□□□□ -2
CHD8-209ENST00000555935 LCE4AQ5TA78 99 aa2.58□□□□□ -2
CHD8-209ENST00000555935 KRTAP4-9Q9BYQ8 210 aa2.55□□□□□ -2
CHD8-209ENST00000555935 KMT2DO14686 5537 aa2.55□□□□□ -2
CHD8-209ENST00000555935 KRTAP9-7A8MTY7 169 aa2.52□□□□□ -2.01
CHD8-209ENST00000555935 KRTAP12-4P60329 112 aa2.49□□□□□ -2.01
CHD8-209ENST00000555935 KRTAP4-2Q9BYR5 136 aa2.49□□□□□ -2.01
CHD8-209ENST00000555935 KRTAP4-11Q9BYQ6 195 aa2.47□□□□□ -2.01
CHD8-209ENST00000555935 USH2AO75445 5202 aa2.46□□□□□ -2.02
CHD8-209ENST00000555935 LCE5AQ5TCM9 118 aa2.44□□□□□ -2.02
CHD8-209ENST00000555935 MT1GP13640 62 aa2.43□□□□□ -2.02
CHD8-209ENST00000555935 KRTAP4-3Q9BYR4 195 aa2.4□□□□□ -2.02
CHD8-209ENST00000555935 FSIP2Q5CZC0 6907 aa2.4□□□□□ -2.03
CHD8-209ENST00000555935 MT1MQ8N339 61 aa2.39□□□□□ -2.03
CHD8-209ENST00000555935 KRTAP19-6Q3LI70 58 aa2.38□□□□□ -2.03
CHD8-209ENST00000555935 KRTAP19-3Q7Z4W3 81 aa2.38□□□□□ -2.03
CHD8-209ENST00000555935 MT1AP04731 61 aa2.34□□□□□ -2.03
CHD8-209ENST00000555935 SSPOA2VEC9 5147 aa2.34□□□□□ -2.03
CHD8-209ENST00000555935 KRTAP6-3Q3LI67 103 aa2.3□□□□□ -2.04
CHD8-209ENST00000555935 KRTAP5-3Q6L8H2 238 aa2.28□□□□□ -2.04
CHD8-209ENST00000555935 LCE3EQ5T5B0 92 aa2.26□□□□□ -2.05
CHD8-209ENST00000555935 LCE3DQ9BYE3 92 aa2.26□□□□□ -2.05
CHD8-209ENST00000555935 FCGBPQ9Y6R7 5405 aaPredicted RBP2.26□□□□□ -2.05
CHD8-209ENST00000555935 PRM1P04553 51 aa2.23□□□□□ -2.05
CHD8-209ENST00000555935 KRTAP5-5Q701N2 237 aaPredicted RBP2.22□□□□□ -2.05
CHD8-209ENST00000555935 KRTAP6-1Q3LI64 71 aa2.21□□□□□ -2.06
CHD8-209ENST00000555935 MUC12Q9UKN1 5478 aa2.2□□□□□ -2.06
CHD8-209ENST00000555935 KRTAP5-9P26371 169 aa2.18□□□□□ -2.06
CHD8-209ENST00000555935 MACF1Q9UPN3 7388 aaKnown RBP2.16□□□□□ -2.06
CHD8-209ENST00000555935 SPRR2FQ96RM1 72 aa2.16□□□□□ -2.06
CHD8-209ENST00000555935 SYNE1Q8NF91 8797 aaKnown RBP2.14□□□□□ -2.07
CHD8-209ENST00000555935 NEBP20929 6669 aa2.12□□□□□ -2.07
CHD8-209ENST00000555935 KRTAP20-1Q3LI63 56 aa2.12□□□□□ -2.07
CHD8-209ENST00000555935 SYNE2Q8WXH0 6885 aaKnown RBP2.12□□□□□ -2.07
CHD8-209ENST00000555935 KRTAP6-2Q3LI66 62 aa2.1□□□□□ -2.07
CHD8-209ENST00000555935 DSTQ03001 7570 aaKnown RBP2.06□□□□□ -2.08
CHD8-209ENST00000555935 HMCN1Q96RW7 5635 aa2.06□□□□□ -2.08
CHD8-209ENST00000555935 LCE1AQ5T7P2 110 aa2.04□□□□□ -2.08
CHD8-209ENST00000555935 MUC5BQ9HC84 5762 aaPredicted RBP2.03□□□□□ -2.08
CHD8-209ENST00000555935 SPRR2EP22531 72 aa2.02□□□□□ -2.09
CHD8-209ENST00000555935 SPRR2BP35325 72 aa2.02□□□□□ -2.09
CHD8-209ENST00000555935 SPRR2AP35326 72 aa2.02□□□□□ -2.09
CHD8-209ENST00000555935 KRTAP2-2Q9BYT5 123 aa2.02□□□□□ -2.09
CHD8-209ENST00000555935 GPR98Q8WXG9 6306 aa1.99□□□□□ -2.09
CHD8-209ENST00000555935 MT3P25713 68 aa1.97□□□□□ -2.09
CHD8-209ENST00000555935 SPRR2DP22532 72 aa1.97□□□□□ -2.09
CHD8-209ENST00000555935 MDN1Q9NU22 5596 aa1.96□□□□□ -2.1
CHD8-209ENST00000555935 OBSCNQ5VST9 7968 aa1.78□□□□□ -2.13
CHD8-209ENST00000555935 LCE1EQ5T753 118 aa1.75□□□□□ -2.13
CHD8-209ENST00000555935 KRTAP5-4Q6L8H1 288 aa1.75□□□□□ -2.13
CHD8-209ENST00000555935 MT4P47944 62 aa1.68□□□□□ -2.14
CHD8-209ENST00000555935 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.68□□□□□ -2.14
CHD8-209ENST00000555935 KRTAP5-2Q701N4 177 aa1.68□□□□□ -2.14
CHD8-209ENST00000555935 KRTAP5-11Q6L8G4 156 aa1.67□□□□□ -2.14
CHD8-209ENST00000555935 KRTAP5-10Q6L8G5 202 aa1.65□□□□□ -2.15
CHD8-209ENST00000555935 MUC5ACP98088 5654 aa1.64□□□□□ -2.15
CHD8-209ENST00000555935 KRTAP5-7Q6L8G8 165 aa1.63□□□□□ -2.15
CHD8-209ENST00000555935 KRTAP20-2Q3LI61 65 aa1.62□□□□□ -2.15
CHD8-209ENST00000555935 AHNAK2Q8IVF2 5795 aa1.61□□□□□ -2.15
CHD8-209ENST00000555935 KRTAP5-1Q6L8H4 278 aa1.59□□□□□ -2.16
CHD8-209ENST00000555935 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
CHD8-209ENST00000555935 LCE1BQ5T7P3 118 aa1.52□□□□□ -2.17
CHD8-209ENST00000555935 LCE1FQ5T754 118 aa1.49□□□□□ -2.17
CHD8-209ENST00000555935 LCE1CQ5T751 118 aa1.48□□□□□ -2.17
CHD8-209ENST00000555935 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
CHD8-209ENST00000555935 KRTAP5-8O75690 187 aa1.42□□□□□ -2.18
CHD8-209ENST00000555935 KRTAP21-2Q3LI59 83 aa1.42□□□□□ -2.18
CHD8-209ENST00000555935 KRTAP4-4Q9BYR3 166 aa1.38□□□□□ -2.19
CHD8-209ENST00000555935 MUC19Q7Z5P9 8384 aa1.19□□□□□ -2.22
CHD8-209ENST00000555935 PHGR1C9JFL3 82 aa1.07□□□□□ -2.24
CHD8-209ENST00000555935 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms