RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 PP632Q6XCG6 107 aa3.21□□□□□ -1.9
PRKCH-218ENST00000555628 MT1LQ93083 61 aa3.21□□□□□ -1.9
PRKCH-218ENST00000555628 KRTAP20-2Q3LI61 65 aa3.2□□□□□ -1.9
PRKCH-218ENST00000555628 A0A1B0GV90 55 aa3.18□□□□□ -1.9
PRKCH-218ENST00000555628 H0Y9P7 68 aa3.18□□□□□ -1.9
PRKCH-218ENST00000555628 SMIM20Q8N5G0 67 aa3.18□□□□□ -1.9
PRKCH-218ENST00000555628 ATOX1O00244 68 aa3.17□□□□□ -1.9
PRKCH-218ENST00000555628 UQCRQO14949 82 aa3.16□□□□□ -1.9
PRKCH-218ENST00000555628 COL5A1-AS1Q5SY13 56 aa3.16□□□□□ -1.9
PRKCH-218ENST00000555628 AHNAKQ09666 5890 aaKnown RBP3.16□□□□□ -1.9
PRKCH-218ENST00000555628 A6NED7 52 aa3.14□□□□□ -1.91
PRKCH-218ENST00000555628 MT-ATP8P03928 68 aa3.13□□□□□ -1.91
PRKCH-218ENST00000555628 KRTAP5-5Q701N2 237 aaPredicted RBP3.13□□□□□ -1.91
PRKCH-218ENST00000555628 DMAC1Q96GE9 116 aa3.12□□□□□ -1.91
PRKCH-218ENST00000555628 MUC5ACP98088 5654 aa3.11□□□□□ -1.91
PRKCH-218ENST00000555628 K7ERU9 68 aa3.11□□□□□ -1.91
PRKCH-218ENST00000555628 SCGB1A1P11684 91 aa3.1□□□□□ -1.91
PRKCH-218ENST00000555628 LINC00208Q96KT6 92 aa3.09□□□□□ -1.91
PRKCH-218ENST00000555628 A0A0D9SG42 100 aa3.08□□□□□ -1.92
PRKCH-218ENST00000555628 KRTAP13-4Q3LI77 160 aa3.08□□□□□ -1.92
PRKCH-218ENST00000555628 MUC5BQ9HC84 5762 aaPredicted RBP3.07□□□□□ -1.92
PRKCH-218ENST00000555628 GTF2H5Q6ZYL4 71 aa3.05□□□□□ -1.92
PRKCH-218ENST00000555628 J3QR89 54 aa3.04□□□□□ -1.92
PRKCH-218ENST00000555628 ETDBQ3ZM63 59 aa3.04□□□□□ -1.92
PRKCH-218ENST00000555628 SYNE1Q8NF91 8797 aaKnown RBP3.03□□□□□ -1.93
PRKCH-218ENST00000555628 SPINT4Q6UDR6 99 aa3.02□□□□□ -1.93
PRKCH-218ENST00000555628 A0A1B0GU33 70 aa3.01□□□□□ -1.93
PRKCH-218ENST00000555628 F8W1H4 67 aa3.01□□□□□ -1.93
PRKCH-218ENST00000555628 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
PRKCH-218ENST00000555628 HIST1H4AP62805 103 aaKnown RBP3□□□□□ -1.93
PRKCH-218ENST00000555628 ATP5EP2Q5VTU8 51 aa3□□□□□ -1.93
PRKCH-218ENST00000555628 TRAV7A0A075B6U4 112 aa2.99□□□□□ -1.93
PRKCH-218ENST00000555628 KRTAP12-4P60329 112 aa2.98□□□□□ -1.93
PRKCH-218ENST00000555628 KRTAP25-1Q3LHN0 102 aa2.96□□□□□ -1.94
PRKCH-218ENST00000555628 C10orf95Q9H7T3 257 aa2.96□□□□□ -1.94
PRKCH-218ENST00000555628 H3BPC8 53 aa2.95□□□□□ -1.94
PRKCH-218ENST00000555628 KRTAP5-8O75690 187 aa2.95□□□□□ -1.94
PRKCH-218ENST00000555628 KTN1-AS1Q86SY8 53 aa2.95□□□□□ -1.94
PRKCH-218ENST00000555628 RPS28P62857 69 aaKnown RBP2.93□□□□□ -1.94
PRKCH-218ENST00000555628 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
PRKCH-218ENST00000555628 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
PRKCH-218ENST00000555628 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
PRKCH-218ENST00000555628 ACYP2P14621 99 aa2.89□□□□□ -1.95
PRKCH-218ENST00000555628 LINC00643Q86TS7 51 aa2.89□□□□□ -1.95
PRKCH-218ENST00000555628 SPTSSBQ8NFR3 76 aa2.87□□□□□ -1.95
PRKCH-218ENST00000555628 KRTAP12-1P59990 96 aa2.84□□□□□ -1.95
PRKCH-218ENST00000555628 KRTAP12-3P60328 96 aa2.79□□□□□ -1.96
PRKCH-218ENST00000555628 CHKB-CPT1BH3BT56 60 aa2.76□□□□□ -1.97
PRKCH-218ENST00000555628 SPATA8Q6RVD6 105 aa2.76□□□□□ -1.97
PRKCH-218ENST00000555628 TMEM258P61165 79 aa2.74□□□□□ -1.97
PRKCH-218ENST00000555628 CCDC179H3BU77 68 aa2.72□□□□□ -1.97
PRKCH-218ENST00000555628 TNP1P09430 55 aa2.72□□□□□ -1.97
PRKCH-218ENST00000555628 COX7CP15954 63 aa2.72□□□□□ -1.97
PRKCH-218ENST00000555628 KRTAP6-1Q3LI64 71 aa2.72□□□□□ -1.97
PRKCH-218ENST00000555628 MT1AP04731 61 aa2.7□□□□□ -1.98
PRKCH-218ENST00000555628 SERP2Q8N6R1 65 aa2.69□□□□□ -1.98
PRKCH-218ENST00000555628 ATP5EP56381 51 aaPredicted RBP2.68□□□□□ -1.98
PRKCH-218ENST00000555628 KRTAP6-2Q3LI66 62 aa2.66□□□□□ -1.98
PRKCH-218ENST00000555628 BRK1Q8WUW1 75 aa2.66□□□□□ -1.98
PRKCH-218ENST00000555628 SERP1Q9Y6X1 66 aa2.64□□□□□ -1.99
PRKCH-218ENST00000555628 ROMO1P60602 79 aa2.63□□□□□ -1.99
PRKCH-218ENST00000555628 SNURFQ9Y675 71 aa2.63□□□□□ -1.99
PRKCH-218ENST00000555628 COA5Q86WW8 74 aa2.59□□□□□ -1.99
PRKCH-218ENST00000555628 H7BZZ5 65 aa2.56□□□□□ -2
PRKCH-218ENST00000555628 Q1T7F1 81 aa2.55□□□□□ -2
PRKCH-218ENST00000555628 A0A1B0GU69 56 aa2.42□□□□□ -2.02
PRKCH-218ENST00000555628 MIR22HGQ0VDD5 57 aa2.42□□□□□ -2.02
PRKCH-218ENST00000555628 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
PRKCH-218ENST00000555628 CDC42SE1Q9NRR8 79 aa2.36□□□□□ -2.03
PRKCH-218ENST00000555628 LINC01558Q9Y6Z2 57 aa2.34□□□□□ -2.03
PRKCH-218ENST00000555628 PRR15LQ9BU68 103 aa2.3□□□□□ -2.04
PRKCH-218ENST00000555628 INE1O15225 51 aa2.28□□□□□ -2.04
PRKCH-218ENST00000555628 UQCR11O14957 56 aa2.21□□□□□ -2.06
PRKCH-218ENST00000555628 KRTAP21-2Q3LI59 83 aa2.11□□□□□ -2.07
PRKCH-218ENST00000555628 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
PRKCH-218ENST00000555628 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
PRKCH-218ENST00000555628 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
PRKCH-218ENST00000555628 PRM1P04553 51 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 52.1 ms