RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 MUC12Q9UKN1 5478 aa8.18□□□□□ -1.1
TMEM260-207ENST00000555497 KRTAP4-3Q9BYR4 195 aa8.14□□□□□ -1.11
TMEM260-207ENST00000555497 KRTAP19-3Q7Z4W3 81 aa8.12□□□□□ -1.11
TMEM260-207ENST00000555497 MT1MQ8N339 61 aa8.07□□□□□ -1.12
TMEM260-207ENST00000555497 KRTAP9-2Q9BYQ4 174 aa8.07□□□□□ -1.12
TMEM260-207ENST00000555497 MT1GP13640 62 aa8.06□□□□□ -1.12
TMEM260-207ENST00000555497 MACF1Q9UPN3 7388 aaKnown RBP8.04□□□□□ -1.12
TMEM260-207ENST00000555497 SPRR2FQ96RM1 72 aa8.02□□□□□ -1.13
TMEM260-207ENST00000555497 LOC100996750A0A140TA64 210 aa7.99□□□□□ -1.13
TMEM260-207ENST00000555497 KRTAP2-3P0C7H8 128 aa7.97□□□□□ -1.13
TMEM260-207ENST00000555497 KRTAP2-4Q9BYR9 128 aa7.97□□□□□ -1.13
TMEM260-207ENST00000555497 KRTAP2-1Q9BYU5 128 aa7.97□□□□□ -1.13
TMEM260-207ENST00000555497 LCE5AQ5TCM9 118 aa7.92□□□□□ -1.14
TMEM260-207ENST00000555497 CRCT1Q9UGL9 99 aa7.86□□□□□ -1.15
TMEM260-207ENST00000555497 SYNE2Q8WXH0 6885 aaKnown RBP7.76□□□□□ -1.17
TMEM260-207ENST00000555497 DSTQ03001 7570 aaKnown RBP7.71□□□□□ -1.18
TMEM260-207ENST00000555497 KRTAP5-9P26371 169 aa7.66□□□□□ -1.18
TMEM260-207ENST00000555497 LCE1AQ5T7P2 110 aa7.59□□□□□ -1.19
TMEM260-207ENST00000555497 MDN1Q9NU22 5596 aa7.56□□□□□ -1.2
TMEM260-207ENST00000555497 SPRR2EP22531 72 aa7.43□□□□□ -1.22
TMEM260-207ENST00000555497 SPRR2BP35325 72 aa7.43□□□□□ -1.22
TMEM260-207ENST00000555497 SPRR2AP35326 72 aa7.43□□□□□ -1.22
TMEM260-207ENST00000555497 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.26□□□□□ -1.25
TMEM260-207ENST00000555497 KRTAP6-1Q3LI64 71 aa7.25□□□□□ -1.25
TMEM260-207ENST00000555497 KRTAP6-3Q3LI67 103 aa7.21□□□□□ -1.26
TMEM260-207ENST00000555497 KRTAP5-5Q701N2 237 aaPredicted RBP7.21□□□□□ -1.26
TMEM260-207ENST00000555497 LCE3BQ5TA77 95 aa7.2□□□□□ -1.26
TMEM260-207ENST00000555497 MT1AP04731 61 aa7.19□□□□□ -1.26
TMEM260-207ENST00000555497 KRTAP9-6A0A140TA67 174 aa7.12□□□□□ -1.27
TMEM260-207ENST00000555497 SPRR2DP22532 72 aa7.12□□□□□ -1.27
TMEM260-207ENST00000555497 KRTAP4-9Q9BYQ8 210 aa7.01□□□□□ -1.29
TMEM260-207ENST00000555497 KRTAP12-4P60329 112 aa6.98□□□□□ -1.29
TMEM260-207ENST00000555497 SYNE1Q8NF91 8797 aaKnown RBP6.97□□□□□ -1.29
TMEM260-207ENST00000555497 KRTAP9-4Q9BYQ2 154 aa6.8□□□□□ -1.32
TMEM260-207ENST00000555497 NEBP20929 6669 aa6.68□□□□□ -1.34
TMEM260-207ENST00000555497 LCE3DQ9BYE3 92 aa6.66□□□□□ -1.34
TMEM260-207ENST00000555497 KRTAP9-7A8MTY7 169 aa6.64□□□□□ -1.35
TMEM260-207ENST00000555497 KRTAP6-2Q3LI66 62 aa6.56□□□□□ -1.36
TMEM260-207ENST00000555497 KRTAP5-4Q6L8H1 288 aa6.55□□□□□ -1.36
TMEM260-207ENST00000555497 LCE3EQ5T5B0 92 aa6.53□□□□□ -1.36
TMEM260-207ENST00000555497 MT3P25713 68 aa6.45□□□□□ -1.38
TMEM260-207ENST00000555497 KRTAP4-6Q9BYQ5 205 aa6.32□□□□□ -1.4
TMEM260-207ENST00000555497 MT4P47944 62 aa6.27□□□□□ -1.41
TMEM260-207ENST00000555497 OBSCNQ5VST9 7968 aa6.21□□□□□ -1.42
TMEM260-207ENST00000555497 LCE4AQ5TA78 99 aa6.21□□□□□ -1.42
TMEM260-207ENST00000555497 PRM1P04553 51 aa6.2□□□□□ -1.42
TMEM260-207ENST00000555497 KRTAP20-2Q3LI61 65 aa6.14□□□□□ -1.43
TMEM260-207ENST00000555497 KRTAP2-2Q9BYT5 123 aa6.08□□□□□ -1.44
TMEM260-207ENST00000555497 KRTAP5-2Q701N4 177 aa6.05□□□□□ -1.44
TMEM260-207ENST00000555497 LCE1DQ5T752 114 aa6.01□□□□□ -1.45
TMEM260-207ENST00000555497 HMCN1Q96RW7 5635 aa5.98□□□□□ -1.45
TMEM260-207ENST00000555497 KRTAP20-1Q3LI63 56 aa5.9□□□□□ -1.46
TMEM260-207ENST00000555497 KRTAP5-3Q6L8H2 238 aa5.89□□□□□ -1.47
TMEM260-207ENST00000555497 LCE1EQ5T753 118 aa5.4□□□□□ -1.54
TMEM260-207ENST00000555497 MUC5ACP98088 5654 aa5.37□□□□□ -1.55
TMEM260-207ENST00000555497 LCE1BQ5T7P3 118 aa5.26□□□□□ -1.57
TMEM260-207ENST00000555497 KRTAP5-1Q6L8H4 278 aa5.2□□□□□ -1.58
TMEM260-207ENST00000555497 KRTAP4-11Q9BYQ6 195 aa5.17□□□□□ -1.58
TMEM260-207ENST00000555497 KRTAP5-10Q6L8G5 202 aa5.16□□□□□ -1.58
TMEM260-207ENST00000555497 KRTAP4-2Q9BYR5 136 aa5.15□□□□□ -1.58
TMEM260-207ENST00000555497 LCE1CQ5T751 118 aa5.09□□□□□ -1.59
TMEM260-207ENST00000555497 KRTAP5-8O75690 187 aa4.98□□□□□ -1.61
TMEM260-207ENST00000555497 AHNAK2Q8IVF2 5795 aa4.95□□□□□ -1.62
TMEM260-207ENST00000555497 KRTAP5-7Q6L8G8 165 aa4.85□□□□□ -1.63
TMEM260-207ENST00000555497 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.79□□□□□ -1.64
TMEM260-207ENST00000555497 KRTAP21-2Q3LI59 83 aa4.71□□□□□ -1.66
TMEM260-207ENST00000555497 GPR98Q8WXG9 6306 aa4.52□□□□□ -1.69
TMEM260-207ENST00000555497 KRTAP5-11Q6L8G4 156 aa4.42□□□□□ -1.7
TMEM260-207ENST00000555497 MUC5BQ9HC84 5762 aaPredicted RBP4.32□□□□□ -1.72
TMEM260-207ENST00000555497 KRTAP4-4Q9BYR3 166 aa4.28□□□□□ -1.72
TMEM260-207ENST00000555497 KRTAP9-9Q9BYP9 154 aa4.26□□□□□ -1.73
TMEM260-207ENST00000555497 KRTAP4-12Q9BQ66 201 aa4.23□□□□□ -1.73
TMEM260-207ENST00000555497 KRTAP21-1Q3LI58 79 aa3.97□□□□□ -1.77
TMEM260-207ENST00000555497 PHGR1C9JFL3 82 aa3.83□□□□□ -1.8
TMEM260-207ENST00000555497 MUC19Q7Z5P9 8384 aa3.75□□□□□ -1.81
TMEM260-207ENST00000555497 LCE1FQ5T754 118 aa3.73□□□□□ -1.81
TMEM260-207ENST00000555497 AHNAKQ09666 5890 aaKnown RBP3.58□□□□□ -1.84
TMEM260-207ENST00000555497 MUC16Q8WXI7 14507 aa2.52□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 55 ms