RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 MT1GP13640 62 aa5.01□□□□□ -1.61
IFT43-209ENST00000555305 KRTAP19-3Q7Z4W3 81 aa5□□□□□ -1.61
IFT43-209ENST00000555305 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.99□□□□□ -1.61
IFT43-209ENST00000555305 INE1O15225 51 aa4.99□□□□□ -1.61
IFT43-209ENST00000555305 SPRR2FQ96RM1 72 aa4.98□□□□□ -1.61
IFT43-209ENST00000555305 MACF1Q9UPN3 7388 aaKnown RBP4.97□□□□□ -1.61
IFT43-209ENST00000555305 SYNE2Q8WXH0 6885 aaKnown RBP4.94□□□□□ -1.62
IFT43-209ENST00000555305 KRTAP4-7Q9BYR0 210 aa4.91□□□□□ -1.62
IFT43-209ENST00000555305 KRTAP5-9P26371 169 aa4.9□□□□□ -1.63
IFT43-209ENST00000555305 MT1MQ8N339 61 aa4.9□□□□□ -1.63
IFT43-209ENST00000555305 LCE5AQ5TCM9 118 aa4.88□□□□□ -1.63
IFT43-209ENST00000555305 KRTAP9-7A8MTY7 169 aa4.88□□□□□ -1.63
IFT43-209ENST00000555305 KRTAP9-6A8MVA2 160 aa4.84□□□□□ -1.63
IFT43-209ENST00000555305 MUC12Q9UKN1 5478 aa4.75□□□□□ -1.65
IFT43-209ENST00000555305 KRTAP6-3Q3LI67 103 aa4.73□□□□□ -1.65
IFT43-209ENST00000555305 LCE1AQ5T7P2 110 aa4.73□□□□□ -1.65
IFT43-209ENST00000555305 KRTAP4-3Q9BYR4 195 aa4.71□□□□□ -1.66
IFT43-209ENST00000555305 SPRR2EP22531 72 aa4.68□□□□□ -1.66
IFT43-209ENST00000555305 SPRR2BP35325 72 aa4.68□□□□□ -1.66
IFT43-209ENST00000555305 SPRR2AP35326 72 aa4.68□□□□□ -1.66
IFT43-209ENST00000555305 KRTAP2-3P0C7H8 128 aa4.65□□□□□ -1.67
IFT43-209ENST00000555305 KRTAP2-4Q9BYR9 128 aa4.65□□□□□ -1.67
IFT43-209ENST00000555305 KRTAP2-1Q9BYU5 128 aa4.65□□□□□ -1.67
IFT43-209ENST00000555305 LOC100996750A0A140TA64 210 aa4.6□□□□□ -1.67
IFT43-209ENST00000555305 MDN1Q9NU22 5596 aa4.53□□□□□ -1.68
IFT43-209ENST00000555305 SPRR2DP22532 72 aa4.52□□□□□ -1.69
IFT43-209ENST00000555305 NEBP20929 6669 aa4.51□□□□□ -1.69
IFT43-209ENST00000555305 DSTQ03001 7570 aaKnown RBP4.43□□□□□ -1.7
IFT43-209ENST00000555305 MT1AP04731 61 aa4.4□□□□□ -1.71
IFT43-209ENST00000555305 KRTAP5-5Q701N2 237 aaPredicted RBP4.4□□□□□ -1.71
IFT43-209ENST00000555305 KRTAP4-6Q9BYQ5 205 aa4.38□□□□□ -1.71
IFT43-209ENST00000555305 LCE3BQ5TA77 95 aa4.32□□□□□ -1.72
IFT43-209ENST00000555305 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
IFT43-209ENST00000555305 KRTAP20-1Q3LI63 56 aa4.27□□□□□ -1.73
IFT43-209ENST00000555305 KRTAP9-4Q9BYQ2 154 aa4.15□□□□□ -1.74
IFT43-209ENST00000555305 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
IFT43-209ENST00000555305 KRTAP12-4P60329 112 aa4.11□□□□□ -1.75
IFT43-209ENST00000555305 LCE4AQ5TA78 99 aa4.07□□□□□ -1.76
IFT43-209ENST00000555305 KRTAP2-2Q9BYT5 123 aa4.06□□□□□ -1.76
IFT43-209ENST00000555305 SYNE1Q8NF91 8797 aaKnown RBP4.04□□□□□ -1.76
IFT43-209ENST00000555305 MT3P25713 68 aa4.01□□□□□ -1.77
IFT43-209ENST00000555305 KRTAP4-12Q9BQ66 201 aa3.98□□□□□ -1.77
IFT43-209ENST00000555305 LCE3DQ9BYE3 92 aa3.97□□□□□ -1.77
IFT43-209ENST00000555305 KRTAP6-2Q3LI66 62 aa3.94□□□□□ -1.78
IFT43-209ENST00000555305 KRTAP4-9Q9BYQ8 210 aa3.94□□□□□ -1.78
IFT43-209ENST00000555305 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
IFT43-209ENST00000555305 MT4P47944 62 aa3.86□□□□□ -1.79
IFT43-209ENST00000555305 KRTAP20-2Q3LI61 65 aa3.84□□□□□ -1.8
IFT43-209ENST00000555305 KRTAP9-9Q9BYP9 154 aa3.83□□□□□ -1.8
IFT43-209ENST00000555305 LCE1DQ5T752 114 aa3.78□□□□□ -1.8
IFT43-209ENST00000555305 KRTAP5-2Q701N4 177 aa3.78□□□□□ -1.8
IFT43-209ENST00000555305 KRTAP5-3Q6L8H2 238 aa3.68□□□□□ -1.82
IFT43-209ENST00000555305 HMCN1Q96RW7 5635 aa3.67□□□□□ -1.82
IFT43-209ENST00000555305 GPR98Q8WXG9 6306 aa3.57□□□□□ -1.84
IFT43-209ENST00000555305 OBSCNQ5VST9 7968 aa3.51□□□□□ -1.85
IFT43-209ENST00000555305 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
IFT43-209ENST00000555305 AHNAK2Q8IVF2 5795 aa3.45□□□□□ -1.86
IFT43-209ENST00000555305 KRTAP4-2Q9BYR5 136 aa3.43□□□□□ -1.86
IFT43-209ENST00000555305 KRTAP4-11Q9BYQ6 195 aa3.43□□□□□ -1.86
IFT43-209ENST00000555305 PRM1P04553 51 aa3.42□□□□□ -1.86
IFT43-209ENST00000555305 KRTAP5-10Q6L8G5 202 aa3.33□□□□□ -1.88
IFT43-209ENST00000555305 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
IFT43-209ENST00000555305 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
IFT43-209ENST00000555305 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
IFT43-209ENST00000555305 KRTAP5-7Q6L8G8 165 aa3.15□□□□□ -1.9
IFT43-209ENST00000555305 KRTAP5-8O75690 187 aa3.15□□□□□ -1.91
IFT43-209ENST00000555305 MUC5ACP98088 5654 aa3.08□□□□□ -1.92
IFT43-209ENST00000555305 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
IFT43-209ENST00000555305 MUC5BQ9HC84 5762 aaPredicted RBP2.83□□□□□ -1.96
IFT43-209ENST00000555305 KRTAP21-2Q3LI59 83 aa2.82□□□□□ -1.96
IFT43-209ENST00000555305 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
IFT43-209ENST00000555305 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
IFT43-209ENST00000555305 LCE1FQ5T754 118 aa2.54□□□□□ -2
IFT43-209ENST00000555305 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
IFT43-209ENST00000555305 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
IFT43-209ENST00000555305 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
IFT43-209ENST00000555305 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
IFT43-209ENST00000555305 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 74.7 ms