RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 SPTAN1Q13813 2472 aaKnown RBP0.19□□□□□ -2.38
VRK1-203ENST00000555067 DCHS1Q96JQ0 3298 aa0.18□□□□□ -2.38
VRK1-203ENST00000555067 SSPOA2VEC9 5147 aa0.17□□□□□ -2.38
VRK1-203ENST00000555067 MUC17Q685J3 4493 aa0.17□□□□□ -2.38
VRK1-203ENST00000555067 MT1GP13640 62 aa0.17□□□□□ -2.38
VRK1-203ENST00000555067 KRTAP19-8Q3LI54 63 aa0.17□□□□□ -2.38
VRK1-203ENST00000555067 KRTAP19-7Q3SYF9 63 aa0.17□□□□□ -2.38
VRK1-203ENST00000555067 DOPEY1Q5JWR5 2465 aa0.17□□□□□ -2.38
VRK1-203ENST00000555067 BOD1L1Q8NFC6 3051 aa0.17□□□□□ -2.38
VRK1-203ENST00000555067 CFAP46Q8IYW2 2715 aa0.17□□□□□ -2.38
VRK1-203ENST00000555067 UBR4Q5T4S7 5183 aa0.17□□□□□ -2.38
VRK1-203ENST00000555067 NEBP20929 6669 aa0.17□□□□□ -2.38
VRK1-203ENST00000555067 FREM2Q5SZK8 3169 aa0.16□□□□□ -2.38
VRK1-203ENST00000555067 STAB2Q8WWQ8 2551 aa0.16□□□□□ -2.38
VRK1-203ENST00000555067 CSMD2Q7Z408 3487 aa0.16□□□□□ -2.38
VRK1-203ENST00000555067 TRRAPQ9Y4A5 3859 aa0.16□□□□□ -2.38
VRK1-203ENST00000555067 ABCA13Q86UQ4 5058 aa0.16□□□□□ -2.38
VRK1-203ENST00000555067 WDFY4Q6ZS81 3184 aa0.16□□□□□ -2.38
VRK1-203ENST00000555067 MKI67P46013 3256 aaKnown RBP0.16□□□□□ -2.38
VRK1-203ENST00000555067 XIRP2A4UGR9 3374 aa0.15□□□□□ -2.39
VRK1-203ENST00000555067 RYR3Q15413 4870 aa0.15□□□□□ -2.39
VRK1-203ENST00000555067 ITPR2Q14571 2701 aa0.15□□□□□ -2.39
VRK1-203ENST00000555067 RNF213Q63HN8 5207 aa0.14□□□□□ -2.39
VRK1-203ENST00000555067 PCLOQ9Y6V0 5065 aa0.14□□□□□ -2.39
VRK1-203ENST00000555067 BIRC6Q9NR09 4857 aa0.14□□□□□ -2.39
VRK1-203ENST00000555067 MUC3AQ02505 3323 aa0.14□□□□□ -2.39
VRK1-203ENST00000555067 DNHD1Q96M86 4753 aa0.14□□□□□ -2.39
VRK1-203ENST00000555067 RYR2Q92736 4967 aa0.14□□□□□ -2.39
VRK1-203ENST00000555067 HYDINQ4G0P3 5121 aa0.13□□□□□ -2.39
VRK1-203ENST00000555067 KMT2CQ8NEZ4 4911 aaKnown RBP0.13□□□□□ -2.39
VRK1-203ENST00000555067 RYR1P21817 5038 aa0.13□□□□□ -2.39
VRK1-203ENST00000555067 SMG1Q96Q15 3661 aaKnown RBP0.13□□□□□ -2.39
VRK1-203ENST00000555067 LOC400499M0QZD8 3231 aa0.13□□□□□ -2.39
VRK1-203ENST00000555067 SRCAPQ6ZRS2 3230 aa0.13□□□□□ -2.39
VRK1-203ENST00000555067 STARD9Q9P2P6 4700 aa0.13□□□□□ -2.39
VRK1-203ENST00000555067 USH2AO75445 5202 aa0.13□□□□□ -2.39
VRK1-203ENST00000555067 CEP295Q9C0D2 2601 aa0.13□□□□□ -2.39
VRK1-203ENST00000555067 HERC2O95714 4834 aa0.12□□□□□ -2.39
VRK1-203ENST00000555067 KRTAP6-1Q3LI64 71 aa0.12□□□□□ -2.39
VRK1-203ENST00000555067 EPPK1P58107 5090 aaKnown RBP0.12□□□□□ -2.39
VRK1-203ENST00000555067 TLN1Q9Y490 2541 aaKnown RBP0.12□□□□□ -2.39
VRK1-203ENST00000555067 MYO15AQ9UKN7 3530 aa0.12□□□□□ -2.39
VRK1-203ENST00000555067 LAMA2P24043 3122 aaKnown RBP0.11□□□□□ -2.39
VRK1-203ENST00000555067 CENPEQ02224 2701 aa0.11□□□□□ -2.39
VRK1-203ENST00000555067 CEP350Q5VT06 3117 aa0.11□□□□□ -2.39
VRK1-203ENST00000555067 ASPMQ8IZT6 3477 aa0.11□□□□□ -2.39
VRK1-203ENST00000555067 MUC2Q02817 5179 aa0.11□□□□□ -2.39
VRK1-203ENST00000555067 KIAA1109Q2LD37 5005 aa0.11□□□□□ -2.39
VRK1-203ENST00000555067 PCNTO95613 3336 aa0.1□□□□□ -2.39
VRK1-203ENST00000555067 CDH23Q9H251 3354 aa0.1□□□□□ -2.39
VRK1-203ENST00000555067 WDFY3Q8IZQ1 3526 aa0.1□□□□□ -2.39
VRK1-203ENST00000555067 DMDP11532 3685 aa0.1□□□□□ -2.39
VRK1-203ENST00000555067 MT2AP02795 61 aa0.1□□□□□ -2.39
VRK1-203ENST00000555067 GOLGB1Q14789 3259 aaKnown RBP0.1□□□□□ -2.39
VRK1-203ENST00000555067 UTRNP46939 3433 aa0.1□□□□□ -2.39
VRK1-203ENST00000555067 VPS13CQ709C8 3753 aa0.09□□□□□ -2.39
VRK1-203ENST00000555067 USP34Q70CQ2 3546 aa0.09□□□□□ -2.39
VRK1-203ENST00000555067 SPEGQ15772 3267 aa0.09□□□□□ -2.39
VRK1-203ENST00000555067 BRCA2P51587 3418 aa0.09□□□□□ -2.39
VRK1-203ENST00000555067 CENPFP49454 3210 aa0.09□□□□□ -2.39
VRK1-203ENST00000555067 DNAH14Q0VDD8 3507 aa0.09□□□□□ -2.39
VRK1-203ENST00000555067 MT1MQ8N339 61 aa0.09□□□□□ -2.4
VRK1-203ENST00000555067 VCANP13611 3396 aa0.08□□□□□ -2.4
VRK1-203ENST00000555067 MUC12Q9UKN1 5478 aa0.08□□□□□ -2.4
VRK1-203ENST00000555067 MT1HL1P0DM35 61 aa0.08□□□□□ -2.4
VRK1-203ENST00000555067 UNC80Q8N2C7 3258 aa0.07□□□□□ -2.4
VRK1-203ENST00000555067 CFAP47Q6ZTR5 3102 aa0.07□□□□□ -2.4
VRK1-203ENST00000555067 EYSQ5T1H1 3165 aa0.07□□□□□ -2.4
VRK1-203ENST00000555067 EP400Q96L91 3159 aa0.06□□□□□ -2.4
VRK1-203ENST00000555067 MT1FP04733 61 aa0.05□□□□□ -2.4
VRK1-203ENST00000555067 MT1BP07438 61 aa0.05□□□□□ -2.4
VRK1-203ENST00000555067 MYO9AB2RTY4 2548 aa0.05□□□□□ -2.4
VRK1-203ENST00000555067 VPS13AQ96RL7 3174 aa0.04□□□□□ -2.4
VRK1-203ENST00000555067 MT4P47944 62 aa0.04□□□□□ -2.4
VRK1-203ENST00000555067 KRTAP20-2Q3LI61 65 aa0.02□□□□□ -2.41
VRK1-203ENST00000555067 KRTAP19-2Q3LHN2 52 aa0□□□□□ -2.41
VRK1-203ENST00000555067 KRTAP20-1Q3LI63 56 aa0□□□□□ -2.41
VRK1-203ENST00000555067 KRTAP19-6Q3LI70 58 aa0□□□□□ -2.41
Retrieved 78 of 20,778 RNA–protein pairs in 723.4 ms