RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 KRTAP4-3Q9BYR4 195 aa4.08□□□□□ -1.76
XRCC3-208ENST00000554811 LOC100996750A0A140TA64 210 aa4.06□□□□□ -1.76
XRCC3-208ENST00000554811 MT1LQ93083 61 aa4.03□□□□□ -1.76
XRCC3-208ENST00000554811 MT1GP13640 62 aa4.03□□□□□ -1.76
XRCC3-208ENST00000554811 MT1EP04732 61 aa4.01□□□□□ -1.77
XRCC3-208ENST00000554811 SPRR2FQ96RM1 72 aa4.01□□□□□ -1.77
XRCC3-208ENST00000554811 SYNE2Q8WXH0 6885 aaKnown RBP3.95□□□□□ -1.78
XRCC3-208ENST00000554811 MACF1Q9UPN3 7388 aaKnown RBP3.9□□□□□ -1.79
XRCC3-208ENST00000554811 KRTAP2-3P0C7H8 128 aa3.84□□□□□ -1.79
XRCC3-208ENST00000554811 KRTAP2-4Q9BYR9 128 aa3.84□□□□□ -1.79
XRCC3-208ENST00000554811 KRTAP2-1Q9BYU5 128 aa3.84□□□□□ -1.79
XRCC3-208ENST00000554811 LCE3BQ5TA77 95 aa3.84□□□□□ -1.8
XRCC3-208ENST00000554811 LCE2DQ5TA82 110 aaPredicted RBP3.79□□□□□ -1.8
XRCC3-208ENST00000554811 KRTAP12-4P60329 112 aa3.78□□□□□ -1.8
XRCC3-208ENST00000554811 KRTAP9-2Q9BYQ4 174 aa3.78□□□□□ -1.8
XRCC3-208ENST00000554811 MT1MQ8N339 61 aa3.78□□□□□ -1.8
XRCC3-208ENST00000554811 KRTAP19-6Q3LI70 58 aa3.77□□□□□ -1.81
XRCC3-208ENST00000554811 KRTAP19-3Q7Z4W3 81 aa3.77□□□□□ -1.81
XRCC3-208ENST00000554811 KRTAP4-9Q9BYQ8 210 aa3.76□□□□□ -1.81
XRCC3-208ENST00000554811 MDN1Q9NU22 5596 aa3.75□□□□□ -1.81
XRCC3-208ENST00000554811 KRTAP19-4Q3LI73 84 aa3.63□□□□□ -1.83
XRCC3-208ENST00000554811 SPRR2EP22531 72 aa3.62□□□□□ -1.83
XRCC3-208ENST00000554811 SPRR2BP35325 72 aa3.62□□□□□ -1.83
XRCC3-208ENST00000554811 SPRR2AP35326 72 aa3.62□□□□□ -1.83
XRCC3-208ENST00000554811 LCE5AQ5TCM9 118 aa3.52□□□□□ -1.85
XRCC3-208ENST00000554811 KRTAP6-1Q3LI64 71 aa3.51□□□□□ -1.85
XRCC3-208ENST00000554811 MUC19Q7Z5P9 8384 aa3.49□□□□□ -1.85
XRCC3-208ENST00000554811 LCE3DQ9BYE3 92 aa3.46□□□□□ -1.86
XRCC3-208ENST00000554811 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
XRCC3-208ENST00000554811 SPRR2DP22532 72 aa3.44□□□□□ -1.86
XRCC3-208ENST00000554811 LCE1AQ5T7P2 110 aa3.44□□□□□ -1.86
XRCC3-208ENST00000554811 KRTAP9-7A8MTY7 169 aa3.39□□□□□ -1.87
XRCC3-208ENST00000554811 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
XRCC3-208ENST00000554811 PRM1P04553 51 aa3.36□□□□□ -1.87
XRCC3-208ENST00000554811 KRTAP9-6A0A140TA67 174 aa3.34□□□□□ -1.87
XRCC3-208ENST00000554811 MT1AP04731 61 aa3.33□□□□□ -1.88
XRCC3-208ENST00000554811 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.31□□□□□ -1.88
XRCC3-208ENST00000554811 MT4P47944 62 aa3.27□□□□□ -1.89
XRCC3-208ENST00000554811 KRTAP6-3Q3LI67 103 aa3.23□□□□□ -1.89
XRCC3-208ENST00000554811 LCE1DQ5T752 114 aa3.22□□□□□ -1.89
XRCC3-208ENST00000554811 KRTAP6-2Q3LI66 62 aa3.21□□□□□ -1.9
XRCC3-208ENST00000554811 KRTAP2-2Q9BYT5 123 aa3.2□□□□□ -1.9
XRCC3-208ENST00000554811 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
XRCC3-208ENST00000554811 KRTAP9-4Q9BYQ2 154 aa3.13□□□□□ -1.91
XRCC3-208ENST00000554811 KRTAP5-9P26371 169 aa3.12□□□□□ -1.91
XRCC3-208ENST00000554811 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
XRCC3-208ENST00000554811 MT3P25713 68 aa3.09□□□□□ -1.92
XRCC3-208ENST00000554811 NEBP20929 6669 aa3.04□□□□□ -1.92
XRCC3-208ENST00000554811 KRTAP4-6Q9BYQ5 205 aa2.97□□□□□ -1.93
XRCC3-208ENST00000554811 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
XRCC3-208ENST00000554811 HMCN1Q96RW7 5635 aa2.82□□□□□ -1.96
XRCC3-208ENST00000554811 KRTAP20-1Q3LI63 56 aa2.8□□□□□ -1.96
XRCC3-208ENST00000554811 MUC5ACP98088 5654 aa2.73□□□□□ -1.97
XRCC3-208ENST00000554811 KRTAP20-2Q3LI61 65 aa2.7□□□□□ -1.98
XRCC3-208ENST00000554811 LCE4AQ5TA78 99 aa2.65□□□□□ -1.98
XRCC3-208ENST00000554811 KRTAP5-4Q6L8H1 288 aa2.62□□□□□ -1.99
XRCC3-208ENST00000554811 KRTAP4-11Q9BYQ6 195 aa2.62□□□□□ -1.99
XRCC3-208ENST00000554811 GPR98Q8WXG9 6306 aa2.54□□□□□ -2
XRCC3-208ENST00000554811 KRTAP5-2Q701N4 177 aa2.44□□□□□ -2.02
XRCC3-208ENST00000554811 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
XRCC3-208ENST00000554811 AHNAK2Q8IVF2 5795 aa2.41□□□□□ -2.02
XRCC3-208ENST00000554811 KRTAP5-3Q6L8H2 238 aa2.39□□□□□ -2.03
XRCC3-208ENST00000554811 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
XRCC3-208ENST00000554811 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.04
XRCC3-208ENST00000554811 KRTAP4-12Q9BQ66 201 aa2.34□□□□□ -2.04
XRCC3-208ENST00000554811 KRTAP4-2Q9BYR5 136 aa2.34□□□□□ -2.04
XRCC3-208ENST00000554811 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
XRCC3-208ENST00000554811 KRTAP9-9Q9BYP9 154 aa2.24□□□□□ -2.05
XRCC3-208ENST00000554811 KRTAP5-1Q6L8H4 278 aa2.17□□□□□ -2.06
XRCC3-208ENST00000554811 KRTAP5-8O75690 187 aa2.16□□□□□ -2.06
XRCC3-208ENST00000554811 KRTAP21-2Q3LI59 83 aa2.11□□□□□ -2.07
XRCC3-208ENST00000554811 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
XRCC3-208ENST00000554811 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.89□□□□□ -2.11
XRCC3-208ENST00000554811 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
XRCC3-208ENST00000554811 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
XRCC3-208ENST00000554811 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
XRCC3-208ENST00000554811 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
XRCC3-208ENST00000554811 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 1022 ms