RNA–Protein interactions for RNA: ENST00000554590.5

FCF1-206, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-206ENST00000554590 PSPHP1O15172 72 aa1.95□□□□□ -2.1
FCF1-206ENST00000554590 KRTAP12-1P59990 96 aa1.95□□□□□ -2.1
FCF1-206ENST00000554590 KRTAP19-6Q3LI70 58 aa1.95□□□□□ -2.1
FCF1-206ENST00000554590 K7ERS5 55 aa1.94□□□□□ -2.1
FCF1-206ENST00000554590 PRO0628Q9UI54 55 aa1.94□□□□□ -2.1
FCF1-206ENST00000554590 PRO2289Q9P1D8 64 aa1.93□□□□□ -2.1
FCF1-206ENST00000554590 LCE3AQ5TA76 89 aa1.9□□□□□ -2.11
FCF1-206ENST00000554590 PLAC4Q8WY50 150 aa1.9□□□□□ -2.11
FCF1-206ENST00000554590 FSIP2Q5CZC0 6907 aa1.9□□□□□ -2.11
FCF1-206ENST00000554590 MT1XP80297 61 aa1.89□□□□□ -2.11
FCF1-206ENST00000554590 KRTAP25-1Q3LHN0 102 aa1.88□□□□□ -2.11
FCF1-206ENST00000554590 PP632Q6XCG6 107 aa1.86□□□□□ -2.11
FCF1-206ENST00000554590 BRK1Q8WUW1 75 aa1.85□□□□□ -2.11
FCF1-206ENST00000554590 C10orf95Q9H7T3 257 aa1.85□□□□□ -2.11
FCF1-206ENST00000554590 ROMO1P60602 79 aa1.84□□□□□ -2.11
FCF1-206ENST00000554590 TNP1P09430 55 aa1.83□□□□□ -2.12
FCF1-206ENST00000554590 USH2AO75445 5202 aa1.82□□□□□ -2.12
FCF1-206ENST00000554590 SPRR5A0A1B0GTR4 108 aa1.82□□□□□ -2.12
FCF1-206ENST00000554590 LINC01554Q52M75 96 aa1.82□□□□□ -2.12
FCF1-206ENST00000554590 CRCT1Q9UGL9 99 aa1.82□□□□□ -2.12
FCF1-206ENST00000554590 A0A0D9SG42 100 aa1.81□□□□□ -2.12
FCF1-206ENST00000554590 KRTAP8-1Q8IUC2 63 aa1.81□□□□□ -2.12
FCF1-206ENST00000554590 SSPOA2VEC9 5147 aa1.81□□□□□ -2.12
FCF1-206ENST00000554590 PMAIP1Q13794 54 aa1.8□□□□□ -2.12
FCF1-206ENST00000554590 LUZP6Q538Z0 58 aa1.8□□□□□ -2.12
FCF1-206ENST00000554590 SPINT4Q6UDR6 99 aa1.8□□□□□ -2.12
FCF1-206ENST00000554590 LCE3DQ9BYE3 92 aa1.79□□□□□ -2.12
FCF1-206ENST00000554590 KTN1-AS1Q86SY8 53 aa1.78□□□□□ -2.12
FCF1-206ENST00000554590 FCGBPQ9Y6R7 5405 aaPredicted RBP1.77□□□□□ -2.13
FCF1-206ENST00000554590 MACF1Q9UPN3 7388 aaKnown RBP1.76□□□□□ -2.13
FCF1-206ENST00000554590 SYNE2Q8WXH0 6885 aaKnown RBP1.75□□□□□ -2.13
FCF1-206ENST00000554590 KRTAP6-3Q3LI67 103 aa1.72□□□□□ -2.13
FCF1-206ENST00000554590 LCE1CQ5T751 118 aa1.72□□□□□ -2.13
FCF1-206ENST00000554590 LCE1BQ5T7P3 118 aa1.72□□□□□ -2.13
FCF1-206ENST00000554590 KRTAP5-5Q701N2 237 aaPredicted RBP1.71□□□□□ -2.14
FCF1-206ENST00000554590 KRTAP19-7Q3SYF9 63 aa1.7□□□□□ -2.14
FCF1-206ENST00000554590 KRTAP12-3P60328 96 aa1.67□□□□□ -2.14
FCF1-206ENST00000554590 MT1EP04732 61 aa1.66□□□□□ -2.14
FCF1-206ENST00000554590 MT1GP13640 62 aa1.65□□□□□ -2.15
FCF1-206ENST00000554590 NEBP20929 6669 aa1.65□□□□□ -2.15
FCF1-206ENST00000554590 KMT2DO14686 5537 aa1.63□□□□□ -2.15
FCF1-206ENST00000554590 KRTAP19-3Q7Z4W3 81 aa1.63□□□□□ -2.15
FCF1-206ENST00000554590 KRTAP19-5Q3LI72 72 aa1.62□□□□□ -2.15
FCF1-206ENST00000554590 MT1LQ93083 61 aa1.62□□□□□ -2.15
FCF1-206ENST00000554590 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
FCF1-206ENST00000554590 MUC12Q9UKN1 5478 aa1.59□□□□□ -2.16
FCF1-206ENST00000554590 SPRR2FQ96RM1 72 aa1.58□□□□□ -2.16
FCF1-206ENST00000554590 MDN1Q9NU22 5596 aa1.58□□□□□ -2.16
FCF1-206ENST00000554590 MT1MQ8N339 61 aa1.55□□□□□ -2.16
FCF1-206ENST00000554590 SPRR2EP22531 72 aa1.5□□□□□ -2.17
FCF1-206ENST00000554590 SPRR2BP35325 72 aa1.5□□□□□ -2.17
FCF1-206ENST00000554590 SPRR2AP35326 72 aa1.5□□□□□ -2.17
FCF1-206ENST00000554590 KRTAP2-3P0C7H8 128 aa1.49□□□□□ -2.17
FCF1-206ENST00000554590 KRTAP2-4Q9BYR9 128 aa1.49□□□□□ -2.17
FCF1-206ENST00000554590 SPRR2DP22532 72 aa1.46□□□□□ -2.18
FCF1-206ENST00000554590 KRTAP2-1Q9BYU5 128 aa1.45□□□□□ -2.18
FCF1-206ENST00000554590 KRTAP20-1Q3LI63 56 aa1.43□□□□□ -2.18
FCF1-206ENST00000554590 MT1AP04731 61 aa1.41□□□□□ -2.18
FCF1-206ENST00000554590 DSTQ03001 7570 aaKnown RBP1.4□□□□□ -2.18
FCF1-206ENST00000554590 KRTAP12-4P60329 112 aa1.36□□□□□ -2.19
FCF1-206ENST00000554590 GPR98Q8WXG9 6306 aa1.36□□□□□ -2.19
FCF1-206ENST00000554590 KRTAP5-7Q6L8G8 165 aa1.34□□□□□ -2.19
FCF1-206ENST00000554590 KRTAP6-1Q3LI64 71 aa1.3□□□□□ -2.2
FCF1-206ENST00000554590 KRTAP21-2Q3LI59 83 aa1.29□□□□□ -2.2
FCF1-206ENST00000554590 KRTAP20-2Q3LI61 65 aa1.29□□□□□ -2.2
FCF1-206ENST00000554590 AHNAK2Q8IVF2 5795 aa1.27□□□□□ -2.21
FCF1-206ENST00000554590 INE1O15225 51 aa1.22□□□□□ -2.21
FCF1-206ENST00000554590 SYNE1Q8NF91 8797 aaKnown RBP1.21□□□□□ -2.21
FCF1-206ENST00000554590 KRTAP6-2Q3LI66 62 aa1.21□□□□□ -2.22
FCF1-206ENST00000554590 MT4P47944 62 aa1.18□□□□□ -2.22
FCF1-206ENST00000554590 KRTAP5-10Q6L8G5 202 aa1.17□□□□□ -2.22
FCF1-206ENST00000554590 AHNAKQ09666 5890 aaKnown RBP1.12□□□□□ -2.23
FCF1-206ENST00000554590 MUC5BQ9HC84 5762 aaPredicted RBP1.05□□□□□ -2.24
FCF1-206ENST00000554590 MUC5ACP98088 5654 aa1.04□□□□□ -2.24
FCF1-206ENST00000554590 PRM1P04553 51 aa0.87□□□□□ -2.27
FCF1-206ENST00000554590 PHGR1C9JFL3 82 aa0.84□□□□□ -2.27
FCF1-206ENST00000554590 KRTAP21-1Q3LI58 79 aa0.64□□□□□ -2.31
FCF1-206ENST00000554590 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 68.3 ms