RNA–Protein interactions for RNA: ENST00000554590.5

FCF1-206, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-206ENST00000554590 AEBP2Q6ZN18 517 aaPredicted RBP15.73■□□□□ 0.11
FCF1-206ENST00000554590 CHIC1Q5VXU3 224 aa14.75□□□□□ -0.05
FCF1-206ENST00000554590 POTEDQ86YR6 584 aa14.49□□□□□ -0.09
FCF1-206ENST00000554590 SENP3Q9H4L4 574 aaPredicted RBP13.69□□□□□ -0.22
FCF1-206ENST00000554590 PHF23Q9BUL5 403 aaPredicted RBP13.29□□□□□ -0.28
FCF1-206ENST00000554590 FOXD1Q16676 465 aa12.88□□□□□ -0.35
FCF1-206ENST00000554590 MSH5O43196 834 aa12.61□□□□□ -0.39
FCF1-206ENST00000554590 PLPPR3Q6T4P5 718 aa12□□□□□ -0.49
FCF1-206ENST00000554590 PIAS4Q8N2W9 510 aaPredicted RBP11.76□□□□□ -0.53
FCF1-206ENST00000554590 CACNB1Q02641 598 aaPredicted RBP11.62□□□□□ -0.55
FCF1-206ENST00000554590 ADRA2BP18089 450 aa11.3□□□□□ -0.6
FCF1-206ENST00000554590 PPP6R1Q9UPN7 881 aa11.29□□□□□ -0.6
FCF1-206ENST00000554590 POTEHQ6S545 545 aa11.11□□□□□ -0.63
FCF1-206ENST00000554590 NISCHQ9Y2I1 1504 aa10.67□□□□□ -0.7
FCF1-206ENST00000554590 KCNA4P22459 653 aa10.65□□□□□ -0.7
FCF1-206ENST00000554590 DMRT2Q9Y5R5 561 aa10.63□□□□□ -0.71
FCF1-206ENST00000554590 PPP4R3CPQ6ZMV5 832 aa10.61□□□□□ -0.71
FCF1-206ENST00000554590 RNF39Q9H2S5 420 aa10.6□□□□□ -0.71
FCF1-206ENST00000554590 NCBP3Q53F19 620 aaKnown RBP10.43□□□□□ -0.74
FCF1-206ENST00000554590 MAPK8IP2Q13387 824 aaPredicted RBP10.41□□□□□ -0.74
FCF1-206ENST00000554590 C1QBPQ07021 282 aaKnown RBP10.39□□□□□ -0.75
FCF1-206ENST00000554590 SCAF1Q9H7N4 1312 aaKnown RBP10.37□□□□□ -0.75
FCF1-206ENST00000554590 DCAF8L1A6NGE4 600 aa10.33□□□□□ -0.76
FCF1-206ENST00000554590 CNKSR2Q8WXI2 1034 aa10.25□□□□□ -0.77
FCF1-206ENST00000554590 NPM3O75607 178 aaKnown RBP10.24□□□□□ -0.77
FCF1-206ENST00000554590 EHMT2Q96KQ7 1210 aa10.2□□□□□ -0.78
FCF1-206ENST00000554590 SLC4A1APQ9BWU0 796 aaKnown RBP10.2□□□□□ -0.78
FCF1-206ENST00000554590 RNF216Q9NWF9 866 aaPredicted RBP9.98□□□□□ -0.81
FCF1-206ENST00000554590 CSRNP3Q8WYN3 585 aa9.96□□□□□ -0.82
FCF1-206ENST00000554590 DNAJC5BQ9UF47 199 aa9.88□□□□□ -0.83
FCF1-206ENST00000554590 HOXD11P31277 338 aaPredicted RBP9.86□□□□□ -0.83
FCF1-206ENST00000554590 SP7Q8TDD2 431 aaPredicted RBP9.81□□□□□ -0.84
FCF1-206ENST00000554590 ZBTB22O15209 634 aa9.78□□□□□ -0.84
FCF1-206ENST00000554590 PLSCR2Q9NRY7 297 aa9.76□□□□□ -0.85
FCF1-206ENST00000554590 FOXD4L1Q9NU39 408 aa9.73□□□□□ -0.85
FCF1-206ENST00000554590 SLC4A2P04920 1241 aa9.6□□□□□ -0.87
FCF1-206ENST00000554590 DSG3P32926 999 aa9.49□□□□□ -0.89
FCF1-206ENST00000554590 MYCNP04198 464 aaPredicted RBP9.46□□□□□ -0.9
FCF1-206ENST00000554590 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.44□□□□□ -0.9
FCF1-206ENST00000554590 CHRDL2Q6WN34 429 aa9.43□□□□□ -0.9
FCF1-206ENST00000554590 CCDC180Q9P1Z9 1646 aa9.38□□□□□ -0.91
FCF1-206ENST00000554590 ATXN8OSP0DMR3 200 aa9.37□□□□□ -0.91
FCF1-206ENST00000554590 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.28□□□□□ -0.92
FCF1-206ENST00000554590 CAPN15O75808 1086 aa9.28□□□□□ -0.92
FCF1-206ENST00000554590 HNRNPUL2Q1KMD3 747 aaKnown RBP9.28□□□□□ -0.92
FCF1-206ENST00000554590 U3KPZ7 1027 aaPredicted RBP9.27□□□□□ -0.93
FCF1-206ENST00000554590 SAMD1Q6SPF0 538 aaPredicted RBP9.25□□□□□ -0.93
FCF1-206ENST00000554590 SPINK5Q9NQ38 1064 aaPredicted RBP9.19□□□□□ -0.94
FCF1-206ENST00000554590 LHX8Q68G74 356 aa9.18□□□□□ -0.94
FCF1-206ENST00000554590 ATF5Q9Y2D1 282 aaPredicted RBP9.18□□□□□ -0.94
FCF1-206ENST00000554590 HAX1O00165 279 aa9.14□□□□□ -0.95
FCF1-206ENST00000554590 RBM42Q9BTD8 480 aaKnown RBP9.14□□□□□ -0.95
FCF1-206ENST00000554590 APLP2Q06481 763 aa9.13□□□□□ -0.95
FCF1-206ENST00000554590 MYO15BQ96JP2 1530 aa9.09□□□□□ -0.95
FCF1-206ENST00000554590 DCAF1Q9Y4B6 1507 aa9.07□□□□□ -0.96
FCF1-206ENST00000554590 ZNF219Q9P2Y4 722 aaPredicted RBP9.04□□□□□ -0.96
FCF1-206ENST00000554590 FKBP8Q14318 412 aa9□□□□□ -0.97
FCF1-206ENST00000554590 ZCCHC6Q5VYS8 1495 aaKnown RBP8.97□□□□□ -0.97
FCF1-206ENST00000554590 TRHP20396 242 aaPredicted RBP8.95□□□□□ -0.98
FCF1-206ENST00000554590 ABCB7O75027 752 aa8.93□□□□□ -0.98
FCF1-206ENST00000554590 PIP4P2Q8N4L2 257 aa8.91□□□□□ -0.98
FCF1-206ENST00000554590 POLA2Q14181 598 aa8.86□□□□□ -0.99
FCF1-206ENST00000554590 EVX2Q03828 476 aa8.85□□□□□ -0.99
FCF1-206ENST00000554590 NACADO15069 1562 aa8.82□□□□□ -1
FCF1-206ENST00000554590 FBLN2P98095 1184 aa8.82□□□□□ -1
FCF1-206ENST00000554590 MKRN4PQ13434 485 aaPredicted RBP8.79□□□□□ -1
FCF1-206ENST00000554590 SPDYE4A6NLX3 237 aa8.75□□□□□ -1.01
FCF1-206ENST00000554590 POTEMA6NI47 508 aa8.73□□□□□ -1.01
FCF1-206ENST00000554590 ZBTB12Q9Y330 459 aaPredicted RBP8.72□□□□□ -1.01
FCF1-206ENST00000554590 ABCC9O60706 1549 aa8.67□□□□□ -1.02
FCF1-206ENST00000554590 RB1CC1Q8TDY2 1594 aa8.66□□□□□ -1.02
FCF1-206ENST00000554590 AMER1Q5JTC6 1135 aaPredicted RBP8.66□□□□□ -1.02
FCF1-206ENST00000554590 PCDH10Q9P2E7 1040 aa8.66□□□□□ -1.02
FCF1-206ENST00000554590 SHROOM4Q9ULL8 1493 aa8.65□□□□□ -1.02
FCF1-206ENST00000554590 POTEGQ6S5H5 508 aa8.65□□□□□ -1.02
FCF1-206ENST00000554590 FXR2P51116 673 aaKnown RBP eCLIP8.63□□□□□ -1.03
FCF1-206ENST00000554590 RTN4Q9NQC3 1192 aaKnown RBP8.63□□□□□ -1.03
FCF1-206ENST00000554590 FBXO3Q9UK99 471 aa8.63□□□□□ -1.03
FCF1-206ENST00000554590 GABBR2O75899 941 aa8.62□□□□□ -1.03
FCF1-206ENST00000554590 AKT1S1Q96B36 256 aa8.62□□□□□ -1.03
FCF1-206ENST00000554590 PROM2Q8N271 834 aa8.6□□□□□ -1.03
FCF1-206ENST00000554590 ZNF692Q9BU19 519 aaPredicted RBP8.54□□□□□ -1.04
FCF1-206ENST00000554590 REM2Q8IYK8 340 aaPredicted RBP8.53□□□□□ -1.04
FCF1-206ENST00000554590 OSCARQ8IYS5 282 aa8.52□□□□□ -1.05
FCF1-206ENST00000554590 SPDYE2BA6NHP3 402 aa8.5□□□□□ -1.05
FCF1-206ENST00000554590 SPDYE6P0CI01 402 aa8.5□□□□□ -1.05
FCF1-206ENST00000554590 SPDYE2Q495Y8 402 aa8.5□□□□□ -1.05
FCF1-206ENST00000554590 VASPP50552 380 aaPredicted RBP8.47□□□□□ -1.05
FCF1-206ENST00000554590 PITPNM1O00562 1244 aa8.46□□□□□ -1.06
FCF1-206ENST00000554590 SSUH2Q9Y2M2 353 aa8.45□□□□□ -1.06
FCF1-206ENST00000554590 PABPN1Q86U42 306 aaKnown RBP eCLIP8.42□□□□□ -1.06
FCF1-206ENST00000554590 C19orf67A6NJJ6 358 aa8.41□□□□□ -1.06
FCF1-206ENST00000554590 POTEIP0CG38 1075 aa8.39□□□□□ -1.07
FCF1-206ENST00000554590 STAG3Q9UJ98 1225 aa8.39□□□□□ -1.07
FCF1-206ENST00000554590 IFNLR1Q8IU57 520 aaPredicted RBP8.38□□□□□ -1.07
FCF1-206ENST00000554590 DCAF8L2P0C7V8 631 aa8.37□□□□□ -1.07
FCF1-206ENST00000554590 BICRAQ9NZM4 1560 aa8.36□□□□□ -1.07
FCF1-206ENST00000554590 OTUD5Q96G74 571 aa8.34□□□□□ -1.07
FCF1-206ENST00000554590 KLHL34Q8N239 644 aa8.32□□□□□ -1.08
FCF1-206ENST00000554590 MIER1Q8N108 512 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms